RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 NPAS4Q8IUM7 802 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 PIK3C3Q8NEB9 887 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 ULK4Q96C45 1275 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 RDH12Q96NR8 316 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 CEP44Q9C0F1 390 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 SCUBE2Q9NQ36 999 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 PRDM5Q9NQX1 630 aaPredicted RBP12.07□□□□□ -0.48
HDAC7-230ENST00000552960 DDX28Q9NUL7 540 aaKnown RBP12.07□□□□□ -0.48
HDAC7-230ENST00000552960 SLC25A37Q9NYZ2 338 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 USE1Q9NZ43 259 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 TMEFF2Q9UIK5 374 aaPredicted RBP12.07□□□□□ -0.48
HDAC7-230ENST00000552960 PTPRDP23468 1912 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 SLC12A8A0AV02 714 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 C2orf81A6NN90 581 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 STX16O14662 325 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 PER2O15055 1255 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 NPPAP01160 153 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 CCDC159P0C7I6 412 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 HSMCR30P0CW71 290 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 SUOXP51687 545 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 TAF10Q12962 218 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 EIF4EBP2Q13542 120 aaPredicted RBP12.07□□□□□ -0.48
HDAC7-230ENST00000552960 MRPL58Q14197 206 aaKnown RBP12.07□□□□□ -0.48
HDAC7-230ENST00000552960 AFMIDQ63HM1 303 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 SPATC1Q76KD6 591 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 DYNC2LI1Q8TCX1 351 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 RHBDF1Q96CC6 855 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 PAWRQ96IZ0 340 aaKnown RBP12.07□□□□□ -0.48
HDAC7-230ENST00000552960 TSSK3Q96PN8 268 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 CCSER2Q9H7U1 834 aa12.07□□□□□ -0.48
HDAC7-230ENST00000552960 PDP1Q9P0J1 537 aaPredicted RBP12.07□□□□□ -0.48
HDAC7-230ENST00000552960 STX7O15400 261 aaKnown RBP12.06□□□□□ -0.48
HDAC7-230ENST00000552960 MFN2O95140 757 aa12.06□□□□□ -0.48
HDAC7-230ENST00000552960 CSF2RAP15509 400 aa12.06□□□□□ -0.48
HDAC7-230ENST00000552960 SOWAHCQ53LP3 525 aaPredicted RBP12.06□□□□□ -0.48
HDAC7-230ENST00000552960 TTC29Q8NA56 475 aaPredicted RBP12.06□□□□□ -0.48
HDAC7-230ENST00000552960 MDGA1Q8NFP4 955 aa12.06□□□□□ -0.48
HDAC7-230ENST00000552960 PYCR2Q96C36 320 aa12.06□□□□□ -0.48
HDAC7-230ENST00000552960 PSD2Q9BQI7 771 aa12.06□□□□□ -0.48
HDAC7-230ENST00000552960 RMND5AQ9H871 391 aa12.06□□□□□ -0.48
HDAC7-230ENST00000552960 GORASP2Q9H8Y8 452 aa12.06□□□□□ -0.48
HDAC7-230ENST00000552960 NECTIN3Q9NQS3 549 aa12.06□□□□□ -0.48
HDAC7-230ENST00000552960 AFF4Q9UHB7 1163 aaKnown RBP12.06□□□□□ -0.48
HDAC7-230ENST00000552960 TTC34A8MYJ7 566 aa12.06□□□□□ -0.48
HDAC7-230ENST00000552960 TMEM189-UBE2V1I3L0A0 370 aa12.06□□□□□ -0.48
HDAC7-230ENST00000552960 NDST3O95803 873 aa12.06□□□□□ -0.48
HDAC7-230ENST00000552960 DNTTP04053 509 aa12.06□□□□□ -0.48
HDAC7-230ENST00000552960 ATF6P18850 670 aa12.06□□□□□ -0.48
HDAC7-230ENST00000552960 EFNA1P20827 205 aaPredicted RBP12.06□□□□□ -0.48
HDAC7-230ENST00000552960 RGRP47804 291 aa12.06□□□□□ -0.48
HDAC7-230ENST00000552960 PPP5CP53041 499 aa12.06□□□□□ -0.48
HDAC7-230ENST00000552960 BCL2A1Q16548 175 aa12.06□□□□□ -0.48
HDAC7-230ENST00000552960 CPSF6Q16630 551 aaKnown RBP eCLIP12.06□□□□□ -0.48
HDAC7-230ENST00000552960 LRRC26Q2I0M4 334 aa12.06□□□□□ -0.48
HDAC7-230ENST00000552960 CARD16Q5EG05 197 aa12.06□□□□□ -0.48
HDAC7-230ENST00000552960 STEAP3Q658P3 488 aa12.06□□□□□ -0.48
HDAC7-230ENST00000552960 VASH1Q7L8A9 365 aaPredicted RBP12.06□□□□□ -0.48
HDAC7-230ENST00000552960 HORMAD1Q86X24 394 aa12.06□□□□□ -0.48
HDAC7-230ENST00000552960 HIPK1Q86Z02 1210 aa12.06□□□□□ -0.48
HDAC7-230ENST00000552960 SETD9Q8NE22 299 aa12.06□□□□□ -0.48
HDAC7-230ENST00000552960 OR8J3Q8NGG0 315 aa12.06□□□□□ -0.48
HDAC7-230ENST00000552960 RHOXF1Q8NHV9 184 aa12.06□□□□□ -0.48
HDAC7-230ENST00000552960 ZNF382Q96SR6 550 aa12.06□□□□□ -0.48
HDAC7-230ENST00000552960 ROGDIQ9GZN7 287 aa12.06□□□□□ -0.48
HDAC7-230ENST00000552960 TRIT1Q9H3H1 467 aaKnown RBP12.06□□□□□ -0.48
HDAC7-230ENST00000552960 RNF167Q9H6Y7 350 aa12.06□□□□□ -0.48
HDAC7-230ENST00000552960 KAT8Q9H7Z6 458 aaKnown RBP12.06□□□□□ -0.48
HDAC7-230ENST00000552960 IL37Q9NZH6 218 aa12.06□□□□□ -0.48
HDAC7-230ENST00000552960 ABCG2Q9UNQ0 655 aa12.06□□□□□ -0.48
HDAC7-230ENST00000552960 PCDHB5Q9Y5E4 795 aa12.06□□□□□ -0.48
HDAC7-230ENST00000552960 UPK3BL1B0FP48 263 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 UPK3BL2E5RIL1 263 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 AIREO43918 545 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 SPNP16150 400 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 CD6P30203 668 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 OR1D2P34982 312 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 ARHGEF6Q15052 776 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 TAF12Q16514 161 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 CACHD1Q5VU97 1274 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 AFTPHQ6ULP2 937 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 Q6ZPB1 254 aaPredicted RBP12.05□□□□□ -0.48
HDAC7-230ENST00000552960 P3H2Q8IVL5 708 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 PJA1Q8NG27 643 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 GPR150Q8NGU9 434 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 CD200R1Q8TD46 325 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 BTN2A3PQ96KV6 586 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 TP63Q9H3D4 680 aaPredicted RBP12.05□□□□□ -0.48
HDAC7-230ENST00000552960 POPDC3Q9HBV1 291 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 TMEM39AQ9NV64 488 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 SAGE1Q9NXZ1 904 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 PCDHGA3Q9Y5H0 932 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 A0A096LPI6 279 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 FAM47E-STBD1D6RA91 191 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 C21orf33P30042 268 aaPredicted RBP12.05□□□□□ -0.48
HDAC7-230ENST00000552960 CLK3P49761 638 aaKnown RBP12.05□□□□□ -0.48
HDAC7-230ENST00000552960 UBE2UQ5VVX9 321 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 DESI1Q6ICB0 168 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 KIAA1841Q6NSI8 718 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 VTCN1Q7Z7D3 282 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 GATAD2AQ86YP4 633 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms