RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 PCDHGA10Q9Y5H3 936 aa11.41□□□□□ -0.58
CKAP4-202ENST00000552828 A0A0J9YY10 115 aa11.4□□□□□ -0.58
CKAP4-202ENST00000552828 HEATR9A2RTY3 570 aa11.4□□□□□ -0.58
CKAP4-202ENST00000552828 MROH6A6NGR9 719 aa11.4□□□□□ -0.58
CKAP4-202ENST00000552828 RRP9O43818 475 aaKnown RBP11.4□□□□□ -0.58
CKAP4-202ENST00000552828 TUBB4AP04350 444 aa11.4□□□□□ -0.58
CKAP4-202ENST00000552828 CTSBP07858 339 aa11.4□□□□□ -0.58
CKAP4-202ENST00000552828 PRSS56P0CW18 603 aa11.4□□□□□ -0.58
CKAP4-202ENST00000552828 ADRA1DP25100 572 aa11.4□□□□□ -0.58
CKAP4-202ENST00000552828 NSG1P42857 185 aa11.4□□□□□ -0.58
CKAP4-202ENST00000552828 MAGEA6P43360 314 aa11.4□□□□□ -0.58
CKAP4-202ENST00000552828 NPY2RP49146 381 aa11.4□□□□□ -0.58
CKAP4-202ENST00000552828 SESN2P58004 480 aaPredicted RBP11.4□□□□□ -0.58
CKAP4-202ENST00000552828 CACNG1Q06432 222 aa11.4□□□□□ -0.58
CKAP4-202ENST00000552828 DBN1Q16643 649 aa11.4□□□□□ -0.58
CKAP4-202ENST00000552828 KYNUQ16719 465 aa11.4□□□□□ -0.58
CKAP4-202ENST00000552828 KCTD19Q17RG1 926 aaPredicted RBP11.4□□□□□ -0.58
CKAP4-202ENST00000552828 SLC5A12Q1EHB4 618 aa11.4□□□□□ -0.58
CKAP4-202ENST00000552828 NKAIN1Q4KMZ8 207 aa11.4□□□□□ -0.58
CKAP4-202ENST00000552828 C1orf189Q5VU69 101 aa11.4□□□□□ -0.58
CKAP4-202ENST00000552828 LRRC8BQ6P9F7 803 aa11.4□□□□□ -0.58
CKAP4-202ENST00000552828 SYDE1Q6ZW31 735 aaPredicted RBP11.4□□□□□ -0.58
CKAP4-202ENST00000552828 NLRP9Q7RTR0 991 aa11.4□□□□□ -0.58
CKAP4-202ENST00000552828 CUZD1Q86UP6 607 aa11.4□□□□□ -0.58
CKAP4-202ENST00000552828 TRIM73Q86UV7 250 aa11.4□□□□□ -0.58
CKAP4-202ENST00000552828 HOOK3Q86VS8 718 aa11.4□□□□□ -0.58
CKAP4-202ENST00000552828 TBC1D21Q8IYX1 336 aa11.4□□□□□ -0.58
CKAP4-202ENST00000552828 ZADH2Q8N4Q0 377 aa11.4□□□□□ -0.58
CKAP4-202ENST00000552828 OR5K2Q8NHB8 316 aa11.4□□□□□ -0.58
CKAP4-202ENST00000552828 N4BP2L2Q92802 583 aaPredicted RBP11.4□□□□□ -0.58
CKAP4-202ENST00000552828 CDKN2AIPNLQ96HQ2 116 aa11.4□□□□□ -0.58
CKAP4-202ENST00000552828 ILKAPQ9H0C8 392 aaPredicted RBP11.4□□□□□ -0.58
CKAP4-202ENST00000552828 ZBTB20Q9HC78 741 aaPredicted RBP11.4□□□□□ -0.58
CKAP4-202ENST00000552828 ATP13A2Q9NQ11 1180 aa11.4□□□□□ -0.58
CKAP4-202ENST00000552828 ENAMQ9NRM1 1142 aa11.4□□□□□ -0.58
CKAP4-202ENST00000552828 SLC22A11Q9NSA0 550 aa11.4□□□□□ -0.58
CKAP4-202ENST00000552828 BFARQ9NZS9 450 aa11.4□□□□□ -0.58
CKAP4-202ENST00000552828 NDOR1Q9UHB4 597 aa11.4□□□□□ -0.58
CKAP4-202ENST00000552828 CDYLQ9Y232 598 aa11.4□□□□□ -0.58
CKAP4-202ENST00000552828 NTNG1Q9Y2I2 539 aa11.4□□□□□ -0.58
CKAP4-202ENST00000552828 COPG1Q9Y678 874 aaKnown RBP11.4□□□□□ -0.58
CKAP4-202ENST00000552828 TCRBV7S3A2A0A539 114 aa11.39□□□□□ -0.59
CKAP4-202ENST00000552828 SLC5A10A0PJK1 596 aa11.39□□□□□ -0.59
CKAP4-202ENST00000552828 BHMG1C9JSJ3 638 aaPredicted RBP11.39□□□□□ -0.59
CKAP4-202ENST00000552828 AGPSO00116 658 aa11.39□□□□□ -0.59
CKAP4-202ENST00000552828 KIF2AO00139 706 aaPredicted RBP11.39□□□□□ -0.59
CKAP4-202ENST00000552828 QSOX1O00391 747 aa11.39□□□□□ -0.59
CKAP4-202ENST00000552828 DR1Q01658 176 aa11.39□□□□□ -0.59
CKAP4-202ENST00000552828 PLOD1Q02809 727 aaPredicted RBP11.39□□□□□ -0.59
CKAP4-202ENST00000552828 AIMP2Q13155 320 aaKnown RBP11.39□□□□□ -0.59
CKAP4-202ENST00000552828 ITIH4Q14624 930 aa11.39□□□□□ -0.59
CKAP4-202ENST00000552828 KCNJ11Q14654 390 aa11.39□□□□□ -0.59
CKAP4-202ENST00000552828 KIR2DS3Q14952 304 aa11.39□□□□□ -0.59
CKAP4-202ENST00000552828 DEFB110Q30KQ9 67 aa11.39□□□□□ -0.59
CKAP4-202ENST00000552828 CCDC38Q502W7 563 aa11.39□□□□□ -0.59
CKAP4-202ENST00000552828 PCID2Q5JVF3 399 aa11.39□□□□□ -0.59
CKAP4-202ENST00000552828 IGFL2Q6UWQ7 119 aa11.39□□□□□ -0.59
CKAP4-202ENST00000552828 PACS1Q6VY07 963 aa11.39□□□□□ -0.59
CKAP4-202ENST00000552828 MICALCLQ6ZW33 695 aa11.39□□□□□ -0.59
CKAP4-202ENST00000552828 TAS2R42Q7RTR8 314 aa11.39□□□□□ -0.59
CKAP4-202ENST00000552828 TMEM151BQ8IW70 566 aa11.39□□□□□ -0.59
CKAP4-202ENST00000552828 ZNF655Q8N720 491 aaPredicted RBP11.39□□□□□ -0.59
CKAP4-202ENST00000552828 ST6GALNAC3Q8NDV1 305 aa11.39□□□□□ -0.59
CKAP4-202ENST00000552828 PPHLN1Q8NEY8 458 aaKnown RBP11.39□□□□□ -0.59
CKAP4-202ENST00000552828 IL22Q9GZX6 179 aa11.39□□□□□ -0.59
CKAP4-202ENST00000552828 WDR54Q9H977 334 aa11.39□□□□□ -0.59
CKAP4-202ENST00000552828 DHCR7Q9UBM7 475 aaKnown RBP11.39□□□□□ -0.59
CKAP4-202ENST00000552828 ASIC3Q9UHC3 531 aa11.39□□□□□ -0.59
CKAP4-202ENST00000552828 RIMKLBQ9ULI2 386 aa11.39□□□□□ -0.59
CKAP4-202ENST00000552828 PLCL2Q9UPR0 1127 aa11.39□□□□□ -0.59
CKAP4-202ENST00000552828 ASF1AQ9Y294 204 aa11.39□□□□□ -0.59
CKAP4-202ENST00000552828 PRSS21Q9Y6M0 314 aa11.39□□□□□ -0.59
CKAP4-202ENST00000552828 MASP2O00187 686 aa11.38□□□□□ -0.59
CKAP4-202ENST00000552828 ALBP02768 609 aa11.38□□□□□ -0.59
CKAP4-202ENST00000552828 FTH1P02794 183 aa11.38□□□□□ -0.59
CKAP4-202ENST00000552828 ITGAXP20702 1163 aa11.38□□□□□ -0.59
CKAP4-202ENST00000552828 MMP11P24347 488 aa11.38□□□□□ -0.59
CKAP4-202ENST00000552828 PEBP1P30086 187 aaKnown RBP11.38□□□□□ -0.59
CKAP4-202ENST00000552828 PTK6Q13882 451 aa11.38□□□□□ -0.59
CKAP4-202ENST00000552828 DHX34Q14147 1143 aaKnown RBP11.38□□□□□ -0.59
CKAP4-202ENST00000552828 ELOAQ14241 798 aaKnown RBP11.38□□□□□ -0.59
CKAP4-202ENST00000552828 CYP2A13Q16696 494 aa11.38□□□□□ -0.59
CKAP4-202ENST00000552828 TSTD2Q5T7W7 516 aa11.38□□□□□ -0.59
CKAP4-202ENST00000552828 ANKRD22Q5VYY1 191 aa11.38□□□□□ -0.59
CKAP4-202ENST00000552828 PCGF5Q86SE9 256 aa11.38□□□□□ -0.59
CKAP4-202ENST00000552828 PPIL6Q8IXY8 311 aa11.38□□□□□ -0.59
CKAP4-202ENST00000552828 MCUQ8NE86 351 aa11.38□□□□□ -0.59
CKAP4-202ENST00000552828 SPATA4Q8NEY3 305 aa11.38□□□□□ -0.59
CKAP4-202ENST00000552828 PPP4R1Q8TF05 950 aa11.38□□□□□ -0.59
CKAP4-202ENST00000552828 ELMO1Q92556 727 aa11.38□□□□□ -0.59
CKAP4-202ENST00000552828 ZNF592Q92610 1267 aa11.38□□□□□ -0.59
CKAP4-202ENST00000552828 PEX13Q92968 403 aa11.38□□□□□ -0.59
CKAP4-202ENST00000552828 FKBP10Q96AY3 582 aa11.38□□□□□ -0.59
CKAP4-202ENST00000552828 KRT12Q99456 494 aa11.38□□□□□ -0.59
CKAP4-202ENST00000552828 WDR77Q9BQA1 342 aaPredicted RBP11.38□□□□□ -0.59
CKAP4-202ENST00000552828 NDC1Q9BTX1 674 aa11.38□□□□□ -0.59
CKAP4-202ENST00000552828 SLC26A1Q9H2B4 701 aa11.38□□□□□ -0.59
CKAP4-202ENST00000552828 XAB2Q9HCS7 855 aaKnown RBP11.38□□□□□ -0.59
CKAP4-202ENST00000552828 AGPAT4Q9NRZ5 378 aa11.38□□□□□ -0.59
CKAP4-202ENST00000552828 TXLNGQ9NUQ3 528 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms