RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 VTNP04004 478 aa3.9□□□□□ -1.79
GPN3-209ENST00000551079 CYP2A7P20853 494 aa3.9□□□□□ -1.79
GPN3-209ENST00000551079 GATA2P23769 480 aaPredicted RBP3.9□□□□□ -1.79
GPN3-209ENST00000551079 ZNF415Q09FC8 603 aa3.9□□□□□ -1.79
GPN3-209ENST00000551079 TAF10Q12962 218 aa3.9□□□□□ -1.79
GPN3-209ENST00000551079 FASTKD3Q14CZ7 662 aaKnown RBP3.9□□□□□ -1.79
GPN3-209ENST00000551079 WTAPQ15007 396 aa3.9□□□□□ -1.79
GPN3-209ENST00000551079 HERC3Q15034 1050 aa3.9□□□□□ -1.79
GPN3-209ENST00000551079 NTRK2Q16620 822 aa3.9□□□□□ -1.79
GPN3-209ENST00000551079 SYT14P1Q58G82 188 aa3.9□□□□□ -1.79
GPN3-209ENST00000551079 TCTEX1D4Q5JR98 221 aa3.9□□□□□ -1.79
GPN3-209ENST00000551079 RNASEH2BQ5TBB1 312 aaKnown RBP3.9□□□□□ -1.79
GPN3-209ENST00000551079 TMEM211Q6ICI0 200 aa3.9□□□□□ -1.79
GPN3-209ENST00000551079 C11orf63Q6NUN7 778 aa3.9□□□□□ -1.79
GPN3-209ENST00000551079 TMEM207Q6UWW9 146 aa3.9□□□□□ -1.79
GPN3-209ENST00000551079 BTN2A1Q7KYR7 527 aa3.9□□□□□ -1.79
GPN3-209ENST00000551079 G2E3Q7L622 706 aa3.9□□□□□ -1.79
GPN3-209ENST00000551079 ERC1Q8IUD2 1116 aa3.9□□□□□ -1.79
GPN3-209ENST00000551079 TAGAPQ8N103 731 aa3.9□□□□□ -1.79
GPN3-209ENST00000551079 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.9□□□□□ -1.79
GPN3-209ENST00000551079 PRSS33Q8NF86 280 aa3.9□□□□□ -1.79
GPN3-209ENST00000551079 OR6S1Q8NH40 331 aa3.9□□□□□ -1.79
GPN3-209ENST00000551079 MAPK15Q8TD08 544 aa3.9□□□□□ -1.79
GPN3-209ENST00000551079 SLAMF9Q96A28 289 aa3.9□□□□□ -1.79
GPN3-209ENST00000551079 ARSGQ96EG1 525 aa3.9□□□□□ -1.79
GPN3-209ENST00000551079 C10orf90Q96M02 699 aa3.9□□□□□ -1.79
GPN3-209ENST00000551079 SFXN2Q96NB2 322 aa3.9□□□□□ -1.79
GPN3-209ENST00000551079 PANK2Q9BZ23 570 aa3.9□□□□□ -1.79
GPN3-209ENST00000551079 SHARPINQ9H0F6 387 aa3.9□□□□□ -1.79
GPN3-209ENST00000551079 EQTNQ9NQ60 294 aa3.9□□□□□ -1.79
GPN3-209ENST00000551079 SPHK2Q9NRA0 654 aa3.9□□□□□ -1.79
GPN3-209ENST00000551079 GIMAP4Q9NUV9 329 aa3.9□□□□□ -1.79
GPN3-209ENST00000551079 VPS28Q9UK41 221 aa3.9□□□□□ -1.79
GPN3-209ENST00000551079 ARID2Q68CP9 1835 aa3.9□□□□□ -1.79
GPN3-209ENST00000551079 SERINC4A6NH21 518 aa3.89□□□□□ -1.79
GPN3-209ENST00000551079 SOCS3O14543 225 aa3.89□□□□□ -1.79
GPN3-209ENST00000551079 SEC24AO95486 1093 aa3.89□□□□□ -1.79
GPN3-209ENST00000551079 ALOX12P18054 663 aa3.89□□□□□ -1.79
GPN3-209ENST00000551079 CSTF2P33240 577 aaKnown RBP eCLIP3.89□□□□□ -1.79
GPN3-209ENST00000551079 RIGQ13278 110 aa3.89□□□□□ -1.79
GPN3-209ENST00000551079 NFATC2Q13469 925 aa3.89□□□□□ -1.79
GPN3-209ENST00000551079 PCLAFQ15004 111 aa3.89□□□□□ -1.79
GPN3-209ENST00000551079 SLC35D3Q5M8T2 416 aa3.89□□□□□ -1.79
GPN3-209ENST00000551079 OR1L3Q8NH93 324 aa3.89□□□□□ -1.79
GPN3-209ENST00000551079 ZNF622Q969S3 477 aaKnown RBP eCLIP3.89□□□□□ -1.79
GPN3-209ENST00000551079 NSUN4Q96CB9 384 aaKnown RBP3.89□□□□□ -1.79
GPN3-209ENST00000551079 SPACA9Q96E40 222 aaPredicted RBP3.89□□□□□ -1.79
GPN3-209ENST00000551079 SDF4Q9BRK5 362 aa3.89□□□□□ -1.79
GPN3-209ENST00000551079 MRPL1Q9BYD6 325 aaKnown RBP3.89□□□□□ -1.79
GPN3-209ENST00000551079 OPA3Q9H6K4 179 aa3.89□□□□□ -1.79
GPN3-209ENST00000551079 PANK3Q9H999 370 aa3.89□□□□□ -1.79
GPN3-209ENST00000551079 TRPV4Q9HBA0 871 aa3.89□□□□□ -1.79
GPN3-209ENST00000551079 PANK4Q9NVE7 773 aa3.89□□□□□ -1.79
GPN3-209ENST00000551079 THEGQ9P2T0 379 aa3.89□□□□□ -1.79
GPN3-209ENST00000551079 RSF1Q96T23 1441 aaPredicted RBP3.88□□□□□ -1.79
GPN3-209ENST00000551079 FEZF1A0PJY2 475 aa3.88□□□□□ -1.79
GPN3-209ENST00000551079 DANCRP0C864 163 aa3.88□□□□□ -1.79
GPN3-209ENST00000551079 SMIM18P0DKX4 95 aa3.88□□□□□ -1.79
GPN3-209ENST00000551079 SLC2A2P11168 524 aaPredicted RBP3.88□□□□□ -1.79
GPN3-209ENST00000551079 PRKACGP22612 351 aa3.88□□□□□ -1.79
GPN3-209ENST00000551079 LHCGRP22888 699 aa3.88□□□□□ -1.79
GPN3-209ENST00000551079 JAK1P23458 1154 aa3.88□□□□□ -1.79
GPN3-209ENST00000551079 PTPN3P26045 913 aa3.88□□□□□ -1.79
GPN3-209ENST00000551079 CDH13P55290 713 aa3.88□□□□□ -1.79
GPN3-209ENST00000551079 MAT1AQ00266 395 aaKnown RBP3.88□□□□□ -1.79
GPN3-209ENST00000551079 GUCY2DQ02846 1103 aa3.88□□□□□ -1.79
GPN3-209ENST00000551079 CA9Q16790 459 aa3.88□□□□□ -1.79
GPN3-209ENST00000551079 FAM205BPQ63HN1 556 aa3.88□□□□□ -1.79
GPN3-209ENST00000551079 CDC20BQ86Y33 519 aa3.88□□□□□ -1.79
GPN3-209ENST00000551079 LMNTD2Q8IXW0 634 aa3.88□□□□□ -1.79
GPN3-209ENST00000551079 MINDY1Q8N5J2 469 aa3.88□□□□□ -1.79
GPN3-209ENST00000551079 APPL2Q8NEU8 664 aa3.88□□□□□ -1.79
GPN3-209ENST00000551079 OR10S1Q8NGN2 331 aa3.88□□□□□ -1.79
GPN3-209ENST00000551079 PRPF31Q8WWY3 499 aaKnown RBP3.88□□□□□ -1.79
GPN3-209ENST00000551079 JAKMIP2Q96AA8 810 aa3.88□□□□□ -1.79
GPN3-209ENST00000551079 CENPTQ96BT3 561 aa3.88□□□□□ -1.79
GPN3-209ENST00000551079 SPDL1Q96EA4 605 aa3.88□□□□□ -1.79
GPN3-209ENST00000551079 CALML4Q96GE6 196 aa3.88□□□□□ -1.79
GPN3-209ENST00000551079 FOXN4Q96NZ1 517 aa3.88□□□□□ -1.79
GPN3-209ENST00000551079 SEPHS2Q99611 448 aa3.88□□□□□ -1.79
GPN3-209ENST00000551079 NKX3-1Q99801 234 aaPredicted RBP3.88□□□□□ -1.79
GPN3-209ENST00000551079 MTMR12Q9C0I1 747 aa3.88□□□□□ -1.79
GPN3-209ENST00000551079 THAP2Q9H0W7 228 aa3.88□□□□□ -1.79
GPN3-209ENST00000551079 SLC35C2Q9NQQ7 365 aa3.88□□□□□ -1.79
GPN3-209ENST00000551079 BLOC1S4Q9NUP1 217 aa3.88□□□□□ -1.79
GPN3-209ENST00000551079 TEX10Q9NXF1 929 aaPredicted RBP3.88□□□□□ -1.79
GPN3-209ENST00000551079 C19orf25Q9UFG5 118 aaPredicted RBP3.88□□□□□ -1.79
GPN3-209ENST00000551079 MAN1B1Q9UKM7 699 aa3.88□□□□□ -1.79
GPN3-209ENST00000551079 PADI2Q9Y2J8 665 aa3.88□□□□□ -1.79
GPN3-209ENST00000551079 MPTX1A8MV57 137 aa3.87□□□□□ -1.79
GPN3-209ENST00000551079 IDH3BO43837 385 aa3.87□□□□□ -1.79
GPN3-209ENST00000551079 SRSF10O75494 262 aaKnown RBP3.87□□□□□ -1.79
GPN3-209ENST00000551079 DNASE1P24855 282 aa3.87□□□□□ -1.79
GPN3-209ENST00000551079 TMEM50BP56557 158 aa3.87□□□□□ -1.79
GPN3-209ENST00000551079 GEMIN4P57678 1058 aaKnown RBP3.87□□□□□ -1.79
GPN3-209ENST00000551079 GCNT1Q02742 428 aa3.87□□□□□ -1.79
GPN3-209ENST00000551079 CALCOCO2Q13137 446 aa3.87□□□□□ -1.79
GPN3-209ENST00000551079 SNAPC1Q16533 368 aa3.87□□□□□ -1.79
GPN3-209ENST00000551079 MTHFSDQ2M296 383 aaKnown RBP3.87□□□□□ -1.79
GPN3-209ENST00000551079 UGT3A2Q3SY77 523 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms