RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 LRRC73Q5JTD7 316 aa4.88□□□□□ -1.63
SCAF11-214ENST00000550893 ACAD10Q6JQN1 1059 aa4.88□□□□□ -1.63
SCAF11-214ENST00000550893 SLC36A4Q6YBV0 504 aa4.88□□□□□ -1.63
SCAF11-214ENST00000550893 LEKR1Q6ZMV7 388 aa4.88□□□□□ -1.63
SCAF11-214ENST00000550893 GLRX5Q86SX6 157 aa4.88□□□□□ -1.63
SCAF11-214ENST00000550893 SETD3Q86TU7 594 aaPredicted RBP4.88□□□□□ -1.63
SCAF11-214ENST00000550893 TRIM69Q86WT6 500 aa4.88□□□□□ -1.63
SCAF11-214ENST00000550893 CNGA4Q8IV77 575 aa4.88□□□□□ -1.63
SCAF11-214ENST00000550893 PGBD5Q8N414 524 aa4.88□□□□□ -1.63
SCAF11-214ENST00000550893 RTL3Q8N8U3 475 aaKnown RBP4.88□□□□□ -1.63
SCAF11-214ENST00000550893 ATP6V0D2Q8N8Y2 350 aa4.88□□□□□ -1.63
SCAF11-214ENST00000550893 OR6K2Q8NGY2 324 aa4.88□□□□□ -1.63
SCAF11-214ENST00000550893 CCDC26Q8TAB7 109 aa4.88□□□□□ -1.63
SCAF11-214ENST00000550893 PRCCQ92733 491 aaPredicted RBP4.88□□□□□ -1.63
SCAF11-214ENST00000550893 FYTTD1Q96QD9 318 aaKnown RBP4.88□□□□□ -1.63
SCAF11-214ENST00000550893 SMIM14Q96QK8 99 aa4.88□□□□□ -1.63
SCAF11-214ENST00000550893 PRSS22Q9GZN4 317 aa4.88□□□□□ -1.63
SCAF11-214ENST00000550893 FZD3Q9NPG1 666 aa4.88□□□□□ -1.63
SCAF11-214ENST00000550893 RRN3Q9NYV6 651 aa4.88□□□□□ -1.63
SCAF11-214ENST00000550893 ADAM22Q9P0K1 906 aa4.88□□□□□ -1.63
SCAF11-214ENST00000550893 KLHL13Q9P2N7 655 aa4.88□□□□□ -1.63
SCAF11-214ENST00000550893 DKK4Q9UBT3 224 aa4.88□□□□□ -1.63
SCAF11-214ENST00000550893 RAB23Q9ULC3 237 aa4.88□□□□□ -1.63
SCAF11-214ENST00000550893 FZD4Q9ULV1 537 aa4.88□□□□□ -1.63
SCAF11-214ENST00000550893 DAAM1Q9Y4D1 1078 aa4.88□□□□□ -1.63
SCAF11-214ENST00000550893 PCDHGB6Q9Y5F9 930 aa4.88□□□□□ -1.63
SCAF11-214ENST00000550893 RELNP78509 3460 aa4.88□□□□□ -1.63
SCAF11-214ENST00000550893 SNRNP200O75643 2136 aaKnown RBP4.88□□□□□ -1.63
SCAF11-214ENST00000550893 FER1L5A0AVI2 2057 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 AHCTF1Q8WYP5 2266 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 A0A0U1RQJ8 604 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 A0A1B0GTQ1 180 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 C3orf70A6NLC5 250 aaPredicted RBP4.87□□□□□ -1.63
SCAF11-214ENST00000550893 H0Y626 953 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 J3KR12 359 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 ALOX15BO15296 676 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 BCAT2O15382 392 aaPredicted RBP4.87□□□□□ -1.63
SCAF11-214ENST00000550893 MT-CO3P00414 261 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 RHOCP08134 193 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 ZNF883P0CG24 379 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 SLC2A3P11169 496 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 APEHP13798 732 aaKnown RBP4.87□□□□□ -1.63
SCAF11-214ENST00000550893 PRLRP16471 622 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 GOT1P17174 413 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 TPH1P17752 444 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 TRIM21P19474 475 aaKnown RBP4.87□□□□□ -1.63
SCAF11-214ENST00000550893 CD27P26842 260 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 EPHA8P29322 1005 aaPredicted RBP4.87□□□□□ -1.63
SCAF11-214ENST00000550893 MIPP30301 263 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 CARSP49589 748 aaKnown RBP4.87□□□□□ -1.63
SCAF11-214ENST00000550893 NOVA1P51513 510 aaKnown RBP4.87□□□□□ -1.63
SCAF11-214ENST00000550893 CCR5P51681 352 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 CCNHP51946 323 aaPredicted RBP4.87□□□□□ -1.63
SCAF11-214ENST00000550893 IL9RQ01113 521 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 SEMA5AQ13591 1074 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 STARD3Q14849 445 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 CYTH1Q15438 398 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 DPYSL2Q16555 572 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 TPD52L1Q16890 204 aaPredicted RBP4.87□□□□□ -1.63
SCAF11-214ENST00000550893 HLA-BQ31612 363 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 RABGAP1LQ5R372 815 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 PLAG1Q6DJT9 500 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 SASS6Q6UVJ0 657 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 ABI3BPQ7Z7G0 1075 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 NAXDQ8IW45 347 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 UMODL1-AS1Q8N2C9 162 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 METTL25Q8N6Q8 603 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 NIPA2Q8N8Q9 360 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 NEK11Q8NG66 645 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 OR2T34Q8NGX1 318 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 SAP25Q8TEE9 199 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 EXOC4Q96A65 974 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 BMFQ96LC9 184 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 SPAG5Q96R06 1193 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 HERPUD2Q9BSE4 406 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 CNPY3Q9BT09 278 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 EFHD1Q9BUP0 239 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 TRIM62Q9BVG3 475 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 NUP58Q9BVL2 599 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 ZYG11BQ9C0D3 744 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 XPO4Q9C0E2 1151 aaKnown RBP4.87□□□□□ -1.63
SCAF11-214ENST00000550893 TRIM36Q9NQ86 728 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 SNX15Q9NRS6 342 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 FBXL12Q9NXK8 326 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 CWC15Q9P013 229 aaKnown RBP4.87□□□□□ -1.63
SCAF11-214ENST00000550893 MGAT4CQ9UBM8 478 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 OR12D3Q9UGF7 316 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 VPS28Q9UK41 221 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 RALYQ9UKM9 306 aaKnown RBP4.87□□□□□ -1.63
SCAF11-214ENST00000550893 TFR2Q9UP52 801 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 FADS3Q9Y5Q0 445 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 FASNP49327 2511 aaKnown RBP4.87□□□□□ -1.63
SCAF11-214ENST00000550893 TLN1Q9Y490 2541 aaKnown RBP4.87□□□□□ -1.63
SCAF11-214ENST00000550893 BAHCC1Q9P281 2608 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 SDK2Q58EX2 2172 aa4.87□□□□□ -1.63
SCAF11-214ENST00000550893 PIEZO2Q9H5I5 2752 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 PIKFYVEQ9Y2I7 2098 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 A0A0U1RQS6 177 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 CXorf51AA0A1B0GTR3 108 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 POM121BA6NF01 834 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms