RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 ADCK2Q7Z695 626 aa4.61□□□□□ -1.67
LIMA1-205ENST00000550592 LONP2Q86WA8 852 aa4.61□□□□□ -1.67
LIMA1-205ENST00000550592 METTL23Q86XA0 190 aa4.61□□□□□ -1.67
LIMA1-205ENST00000550592 SFXN2Q96NB2 322 aa4.61□□□□□ -1.67
LIMA1-205ENST00000550592 MUS81Q96NY9 551 aa4.61□□□□□ -1.67
LIMA1-205ENST00000550592 SPAG5Q96R06 1193 aa4.61□□□□□ -1.67
LIMA1-205ENST00000550592 FEVQ99581 238 aa4.61□□□□□ -1.67
LIMA1-205ENST00000550592 EVA1AQ9H8M9 152 aa4.61□□□□□ -1.67
LIMA1-205ENST00000550592 MYNNQ9NPC7 610 aa4.61□□□□□ -1.67
LIMA1-205ENST00000550592 ABT1Q9ULW3 272 aaKnown RBP4.61□□□□□ -1.67
LIMA1-205ENST00000550592 PADI2Q9Y2J8 665 aa4.61□□□□□ -1.67
LIMA1-205ENST00000550592 SOS1Q07889 1333 aaPredicted RBP4.61□□□□□ -1.67
LIMA1-205ENST00000550592 CICQ96RK0 1608 aaPredicted RBP4.61□□□□□ -1.67
LIMA1-205ENST00000550592 A0A1W2PPI3 338 aa4.6□□□□□ -1.67
LIMA1-205ENST00000550592 PLSCR5A0PG75 271 aa4.6□□□□□ -1.67
LIMA1-205ENST00000550592 PRAC2D3DTV9 90 aa4.6□□□□□ -1.67
LIMA1-205ENST00000550592 MEIS2O14770 477 aa4.6□□□□□ -1.67
LIMA1-205ENST00000550592 WDPCPO95876 746 aa4.6□□□□□ -1.67
LIMA1-205ENST00000550592 SNRNP70P08621 437 aaKnown RBP4.6□□□□□ -1.67
LIMA1-205ENST00000550592 EEF1B2P24534 225 aaKnown RBP4.6□□□□□ -1.67
LIMA1-205ENST00000550592 SLC6A6P31641 620 aa4.6□□□□□ -1.67
LIMA1-205ENST00000550592 NPY4RP50391 375 aa4.6□□□□□ -1.67
LIMA1-205ENST00000550592 TPD52P55327 224 aaPredicted RBP4.6□□□□□ -1.67
LIMA1-205ENST00000550592 PITX1P78337 314 aaPredicted RBP4.6□□□□□ -1.67
LIMA1-205ENST00000550592 RBP5P82980 135 aa4.6□□□□□ -1.67
LIMA1-205ENST00000550592 EEF1A2Q05639 463 aaKnown RBP4.6□□□□□ -1.67
LIMA1-205ENST00000550592 BFSP1Q12934 665 aa4.6□□□□□ -1.67
LIMA1-205ENST00000550592 COASYQ13057 564 aa4.6□□□□□ -1.67
LIMA1-205ENST00000550592 MFAP5Q13361 173 aa4.6□□□□□ -1.67
LIMA1-205ENST00000550592 KIR2DS3Q14952 304 aa4.6□□□□□ -1.67
LIMA1-205ENST00000550592 DEFB115Q30KQ5 88 aa4.6□□□□□ -1.67
LIMA1-205ENST00000550592 CCDC184Q52MB2 194 aa4.6□□□□□ -1.67
LIMA1-205ENST00000550592 ASPRV1Q53RT3 343 aa4.6□□□□□ -1.67
LIMA1-205ENST00000550592 ZNF324BQ6AW86 544 aaPredicted RBP4.6□□□□□ -1.67
LIMA1-205ENST00000550592 DSG4Q86SJ6 1040 aa4.6□□□□□ -1.67
LIMA1-205ENST00000550592 COMMD2Q86X83 199 aa4.6□□□□□ -1.67
LIMA1-205ENST00000550592 NAGSQ8N159 534 aa4.6□□□□□ -1.67
LIMA1-205ENST00000550592 IQUBQ8NA54 791 aa4.6□□□□□ -1.67
LIMA1-205ENST00000550592 SLC4A11Q8NBS3 891 aa4.6□□□□□ -1.67
LIMA1-205ENST00000550592 RNF128Q8TEB7 428 aa4.6□□□□□ -1.67
LIMA1-205ENST00000550592 EXT2Q93063 718 aa4.6□□□□□ -1.67
LIMA1-205ENST00000550592 SPSB1Q96BD6 273 aa4.6□□□□□ -1.67
LIMA1-205ENST00000550592 SGK494Q96LW2 274 aa4.6□□□□□ -1.67
LIMA1-205ENST00000550592 C17orf77Q96MU5 243 aa4.6□□□□□ -1.67
LIMA1-205ENST00000550592 ZNF558Q96NG5 402 aa4.6□□□□□ -1.67
LIMA1-205ENST00000550592 GBP5Q96PP8 586 aa4.6□□□□□ -1.67
LIMA1-205ENST00000550592 VN1R1Q9GZP7 353 aa4.6□□□□□ -1.67
LIMA1-205ENST00000550592 ZWILCHQ9H900 591 aa4.6□□□□□ -1.67
LIMA1-205ENST00000550592 NOL7Q9UMY1 257 aaKnown RBP4.6□□□□□ -1.67
LIMA1-205ENST00000550592 CRB1P82279 1406 aa4.6□□□□□ -1.67
LIMA1-205ENST00000550592 TNRC18O15417 2968 aaPredicted RBP4.6□□□□□ -1.67
LIMA1-205ENST00000550592 TNRC6CQ9HCJ0 1690 aaKnown RBP4.6□□□□□ -1.67
LIMA1-205ENST00000550592 HYKKA2RU49 373 aa4.59□□□□□ -1.67
LIMA1-205ENST00000550592 NEMP2A6NFY4 417 aa4.59□□□□□ -1.67
LIMA1-205ENST00000550592 GLTPD2A6NH11 291 aa4.59□□□□□ -1.67
LIMA1-205ENST00000550592 ANXA2P2A6NMY6 339 aa4.59□□□□□ -1.67
LIMA1-205ENST00000550592 CLDN4O14493 209 aa4.59□□□□□ -1.67
LIMA1-205ENST00000550592 ACOT8O14734 319 aa4.59□□□□□ -1.67
LIMA1-205ENST00000550592 CTSVO60911 334 aa4.59□□□□□ -1.67
LIMA1-205ENST00000550592 PENKP01210 267 aaPredicted RBP4.59□□□□□ -1.67
LIMA1-205ENST00000550592 IGHV2-70P01814 119 aa4.59□□□□□ -1.67
LIMA1-205ENST00000550592 IGHV4-39P01824 125 aa4.59□□□□□ -1.67
LIMA1-205ENST00000550592 RPN1P04843 607 aaKnown RBP4.59□□□□□ -1.67
LIMA1-205ENST00000550592 ATP5BP06576 529 aaKnown RBP4.59□□□□□ -1.67
LIMA1-205ENST00000550592 ACP2P11117 423 aa4.59□□□□□ -1.67
LIMA1-205ENST00000550592 FGF3P11487 239 aaPredicted RBP4.59□□□□□ -1.67
LIMA1-205ENST00000550592 CKMT2P17540 419 aa4.59□□□□□ -1.67
LIMA1-205ENST00000550592 CYP11B2P19099 503 aa4.59□□□□□ -1.67
LIMA1-205ENST00000550592 MPZP25189 248 aa4.59□□□□□ -1.67
LIMA1-205ENST00000550592 HOXC13P31276 330 aa4.59□□□□□ -1.67
LIMA1-205ENST00000550592 CCKARP32238 428 aa4.59□□□□□ -1.67
LIMA1-205ENST00000550592 HSPA4P34932 840 aa4.59□□□□□ -1.67
LIMA1-205ENST00000550592 USP6P35125 1406 aa4.59□□□□□ -1.67
LIMA1-205ENST00000550592 POLR2LP62875 67 aaKnown RBP4.59□□□□□ -1.67
LIMA1-205ENST00000550592 C6orf136Q5SQH8 315 aa4.59□□□□□ -1.67
LIMA1-205ENST00000550592 SPSB3Q6PJ21 355 aa4.59□□□□□ -1.67
LIMA1-205ENST00000550592 KCTD8Q6ZWB6 473 aa4.59□□□□□ -1.67
LIMA1-205ENST00000550592 TMPRSS11BQ86T26 416 aa4.59□□□□□ -1.67
LIMA1-205ENST00000550592 EXOC3L1Q86VI1 746 aa4.59□□□□□ -1.67
LIMA1-205ENST00000550592 FAM114A1Q8IWE2 563 aa4.59□□□□□ -1.67
LIMA1-205ENST00000550592 CCAR2Q8N163 923 aaKnown RBP4.59□□□□□ -1.67
LIMA1-205ENST00000550592 CRYBG2Q8N1P7 616 aa4.59□□□□□ -1.67
LIMA1-205ENST00000550592 SETD6Q8TBK2 473 aa4.59□□□□□ -1.67
LIMA1-205ENST00000550592 DEPDC1BQ8WUY9 529 aa4.59□□□□□ -1.67
LIMA1-205ENST00000550592 FAM162AQ96A26 154 aa4.59□□□□□ -1.67
LIMA1-205ENST00000550592 ARRDC1-AS1Q9H2J1 176 aa4.59□□□□□ -1.67
LIMA1-205ENST00000550592 APOBEC3GQ9HC16 384 aaKnown RBP4.59□□□□□ -1.67
LIMA1-205ENST00000550592 Q9N2K0 584 aa4.59□□□□□ -1.67
LIMA1-205ENST00000550592 MRGBPQ9NV56 204 aa4.59□□□□□ -1.67
LIMA1-205ENST00000550592 FMN2Q9NZ56 1722 aa4.59□□□□□ -1.67
LIMA1-205ENST00000550592 B3GAT1Q9P2W7 334 aa4.59□□□□□ -1.67
LIMA1-205ENST00000550592 LRWD1Q9UFC0 647 aa4.59□□□□□ -1.67
LIMA1-205ENST00000550592 GTF3C4Q9UKN8 822 aa4.59□□□□□ -1.67
LIMA1-205ENST00000550592 PCDHGB1Q9Y5G3 927 aa4.59□□□□□ -1.67
LIMA1-205ENST00000550592 TNFRSF18Q9Y5U5 241 aa4.59□□□□□ -1.67
LIMA1-205ENST00000550592 RGPD8O14715 1765 aaPredicted RBP4.58□□□□□ -1.68
LIMA1-205ENST00000550592 FLT1P17948 1338 aa4.58□□□□□ -1.68
LIMA1-205ENST00000550592 IGLV5-45A0A087WSX0 123 aa4.58□□□□□ -1.68
LIMA1-205ENST00000550592 A0A087WV48 116 aa4.58□□□□□ -1.68
LIMA1-205ENST00000550592 WDR46O15213 610 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms