RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 SEMA3AQ14563 771 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 NCEH1Q6PIU2 408 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 GALNT10Q86SR1 603 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 SLC43A3Q8NBI5 491 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 GLB1L3Q8NCI6 653 aaPredicted RBP14.64□□□□□ -0.07
CUX1-214ENST00000550008 SLC39A13Q96H72 371 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 REXO4Q9GZR2 422 aaKnown RBP14.64□□□□□ -0.07
CUX1-214ENST00000550008 GSTO2Q9H4Y5 243 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 ZIM2Q9NZV7 527 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 TAC3Q9UHF0 121 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 NDRG2Q9UN36 371 aaKnown RBP14.64□□□□□ -0.07
CUX1-214ENST00000550008 FABP3P05413 133 aa14.63□□□□□ -0.07
CUX1-214ENST00000550008 KRT20P35900 424 aa14.63□□□□□ -0.07
CUX1-214ENST00000550008 CDC42P60953 191 aa14.63□□□□□ -0.07
CUX1-214ENST00000550008 TRAP1Q12931 704 aaKnown RBP14.63□□□□□ -0.07
CUX1-214ENST00000550008 RSPO2Q6UXX9 243 aaPredicted RBP14.63□□□□□ -0.07
CUX1-214ENST00000550008 PRR23CQ6ZRP0 262 aa14.63□□□□□ -0.07
CUX1-214ENST00000550008 AHI1Q8N157 1196 aa14.63□□□□□ -0.07
CUX1-214ENST00000550008 RHEBL1Q8TAI7 183 aa14.63□□□□□ -0.07
CUX1-214ENST00000550008 BPIFB1Q8TDL5 484 aa14.63□□□□□ -0.07
CUX1-214ENST00000550008 RANBP9Q96S59 729 aa14.63□□□□□ -0.07
CUX1-214ENST00000550008 TPK1Q9H3S4 243 aa14.63□□□□□ -0.07
CUX1-214ENST00000550008 TNFRSF11BO00300 401 aa14.63□□□□□ -0.07
CUX1-214ENST00000550008 TNFRSF10BO14763 440 aa14.63□□□□□ -0.07
CUX1-214ENST00000550008 TRMUO75648 421 aaKnown RBP14.63□□□□□ -0.07
CUX1-214ENST00000550008 RSL1D1O76021 490 aaKnown RBP14.63□□□□□ -0.07
CUX1-214ENST00000550008 PAK4O96013 591 aaPredicted RBP14.63□□□□□ -0.07
CUX1-214ENST00000550008 IFNA16P05015 189 aa14.63□□□□□ -0.07
CUX1-214ENST00000550008 UMPSP11172 480 aa14.63□□□□□ -0.07
CUX1-214ENST00000550008 CAPN3P20807 821 aa14.63□□□□□ -0.07
CUX1-214ENST00000550008 ERVPABLB-1P60509 514 aa14.63□□□□□ -0.07
CUX1-214ENST00000550008 ERVK-21P61565 698 aa14.63□□□□□ -0.07
CUX1-214ENST00000550008 ADAM17P78536 824 aa14.63□□□□□ -0.07
CUX1-214ENST00000550008 TMEM115Q12893 351 aaPredicted RBP14.63□□□□□ -0.07
CUX1-214ENST00000550008 GANABQ14697 944 aaKnown RBP14.63□□□□□ -0.07
CUX1-214ENST00000550008 DENND5AQ6IQ26 1287 aa14.63□□□□□ -0.07
CUX1-214ENST00000550008 SLC9A6Q92581 669 aa14.63□□□□□ -0.07
CUX1-214ENST00000550008 BADQ92934 168 aa14.63□□□□□ -0.07
CUX1-214ENST00000550008 SMURF2Q9HAU4 748 aa14.63□□□□□ -0.07
CUX1-214ENST00000550008 IL17CQ9P0M4 197 aa14.63□□□□□ -0.07
CUX1-214ENST00000550008 ACTR3BQ9P1U1 418 aa14.63□□□□□ -0.07
CUX1-214ENST00000550008 DMTF1Q9Y222 760 aa14.63□□□□□ -0.07
CUX1-214ENST00000550008 CAPN14A8MX76 684 aa14.63□□□□□ -0.07
CUX1-214ENST00000550008 B4GALT3O60512 393 aa14.63□□□□□ -0.07
CUX1-214ENST00000550008 GUCY1B2O75343 617 aa14.63□□□□□ -0.07
CUX1-214ENST00000550008 ARCN1P48444 511 aaKnown RBP14.63□□□□□ -0.07
CUX1-214ENST00000550008 CNPY1Q3B7I2 92 aa14.63□□□□□ -0.07
CUX1-214ENST00000550008 CYP27C1Q4G0S4 372 aa14.63□□□□□ -0.07
CUX1-214ENST00000550008 NRG4Q8WWG1 115 aa14.63□□□□□ -0.07
CUX1-214ENST00000550008 IL17FQ96PD4 163 aa14.63□□□□□ -0.07
CUX1-214ENST00000550008 RBM4BQ9BQ04 359 aaKnown RBP14.63□□□□□ -0.07
CUX1-214ENST00000550008 RBM4Q9BWF3 364 aaKnown RBP14.63□□□□□ -0.07
CUX1-214ENST00000550008 FARSBQ9NSD9 589 aaKnown RBP14.63□□□□□ -0.07
CUX1-214ENST00000550008 SOHLH2Q9NX45 425 aa14.63□□□□□ -0.07
CUX1-214ENST00000550008 CDV3Q9UKY7 258 aaKnown RBP14.63□□□□□ -0.07
CUX1-214ENST00000550008 SLC27A6Q9Y2P4 619 aa14.63□□□□□ -0.07
CUX1-214ENST00000550008 NPIPB15A6NHN6 443 aaPredicted RBP14.62□□□□□ -0.07
CUX1-214ENST00000550008 MYL12BO14950 172 aa14.62□□□□□ -0.07
CUX1-214ENST00000550008 ZNF8P17098 575 aaPredicted RBP14.62□□□□□ -0.07
CUX1-214ENST00000550008 CAPGP40121 348 aa14.62□□□□□ -0.07
CUX1-214ENST00000550008 EEFSECP57772 596 aaKnown RBP14.62□□□□□ -0.07
CUX1-214ENST00000550008 FAM189BP81408 668 aa14.62□□□□□ -0.07
CUX1-214ENST00000550008 RAB33AQ14088 237 aa14.62□□□□□ -0.07
CUX1-214ENST00000550008 OGFOD2Q6N063 350 aa14.62□□□□□ -0.07
CUX1-214ENST00000550008 SMYD1Q8NB12 490 aa14.62□□□□□ -0.07
CUX1-214ENST00000550008 TFGQ92734 400 aaPredicted RBP14.62□□□□□ -0.07
CUX1-214ENST00000550008 KAT2AQ92830 837 aa14.62□□□□□ -0.07
CUX1-214ENST00000550008 ZNF382Q96SR6 550 aa14.62□□□□□ -0.07
CUX1-214ENST00000550008 ZSCAN5AQ9BUG6 496 aa14.62□□□□□ -0.07
CUX1-214ENST00000550008 MEAF6Q9HAF1 191 aa14.62□□□□□ -0.07
CUX1-214ENST00000550008 RPS6KB2Q9UBS0 482 aa14.62□□□□□ -0.07
CUX1-214ENST00000550008 NUDT14O95848 222 aa14.62□□□□□ -0.07
CUX1-214ENST00000550008 SOX6P35712 828 aa14.62□□□□□ -0.07
CUX1-214ENST00000550008 RPL3P39023 403 aaKnown RBP14.62□□□□□ -0.07
CUX1-214ENST00000550008 DEFA1P59665 94 aa14.62□□□□□ -0.07
CUX1-214ENST00000550008 DEFA3P59666 94 aa14.62□□□□□ -0.07
CUX1-214ENST00000550008 GCNT6Q5T4J0 391 aa14.62□□□□□ -0.07
CUX1-214ENST00000550008 TCEAL4Q96EI5 215 aa14.62□□□□□ -0.07
CUX1-214ENST00000550008 LRCH3Q96II8 777 aa14.62□□□□□ -0.07
CUX1-214ENST00000550008 FNDC11Q9BVV2 318 aa14.62□□□□□ -0.07
CUX1-214ENST00000550008 H3BSA7 217 aa14.62□□□□□ -0.07
CUX1-214ENST00000550008 TOR1BO14657 336 aa14.62□□□□□ -0.07
CUX1-214ENST00000550008 TRIM24O15164 1050 aa14.62□□□□□ -0.07
CUX1-214ENST00000550008 TLX1P31314 330 aaPredicted RBP14.62□□□□□ -0.07
CUX1-214ENST00000550008 RPS13P62277 151 aaKnown RBP14.62□□□□□ -0.07
CUX1-214ENST00000550008 EMX2Q04743 252 aa14.62□□□□□ -0.07
CUX1-214ENST00000550008 TRAF3Q13114 568 aa14.62□□□□□ -0.07
CUX1-214ENST00000550008 FAM180BQ6P0A1 224 aa14.62□□□□□ -0.07
CUX1-214ENST00000550008 LETMD1Q6P1Q0 360 aa14.62□□□□□ -0.07
CUX1-214ENST00000550008 KCTD8Q6ZWB6 473 aa14.62□□□□□ -0.07
CUX1-214ENST00000550008 OVCA2Q8WZ82 227 aa14.62□□□□□ -0.07
CUX1-214ENST00000550008 SEZ6LQ9BYH1 1024 aa14.62□□□□□ -0.07
CUX1-214ENST00000550008 PI15O43692 258 aa14.62□□□□□ -0.07
CUX1-214ENST00000550008 OR10H2O60403 315 aa14.62□□□□□ -0.07
CUX1-214ENST00000550008 PRPS1L1P21108 318 aa14.62□□□□□ -0.07
CUX1-214ENST00000550008 PPIBP23284 216 aaKnown RBP14.62□□□□□ -0.07
CUX1-214ENST00000550008 DNAJB1P25685 340 aa14.62□□□□□ -0.07
CUX1-214ENST00000550008 HOXD9P28356 352 aaPredicted RBP14.62□□□□□ -0.07
CUX1-214ENST00000550008 FMO3P31513 532 aa14.62□□□□□ -0.07
CUX1-214ENST00000550008 OR4D2P58180 307 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms