RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 COILP38432 576 aaPredicted RBP15.69■□□□□ 0.1
VPS29-207ENST00000549970 FOXL2P58012 376 aa15.69■□□□□ 0.1
VPS29-207ENST00000549970 DHX34Q14147 1143 aaKnown RBP15.69■□□□□ 0.1
VPS29-207ENST00000549970 FCRL6Q6DN72 434 aa15.69■□□□□ 0.1
VPS29-207ENST00000549970 NEPROQ6NW34 567 aa15.69■□□□□ 0.1
VPS29-207ENST00000549970 CCDC137Q6PK04 289 aaKnown RBP15.69■□□□□ 0.1
VPS29-207ENST00000549970 FIGLAQ6QHK4 219 aa15.69■□□□□ 0.1
VPS29-207ENST00000549970 CILP2Q8IUL8 1156 aa15.69■□□□□ 0.1
VPS29-207ENST00000549970 TMEM102Q8N9M5 508 aaPredicted RBP15.69■□□□□ 0.1
VPS29-207ENST00000549970 FDCSPQ8NFU4 85 aa15.69■□□□□ 0.1
VPS29-207ENST00000549970 TCF12Q99081 682 aa15.69■□□□□ 0.1
VPS29-207ENST00000549970 GALPQ9UBC7 116 aa15.69■□□□□ 0.1
VPS29-207ENST00000549970 MRFAP1Q9Y605 127 aa15.69■□□□□ 0.1
VPS29-207ENST00000549970 E5RI56 91 aa15.68■□□□□ 0.1
VPS29-207ENST00000549970 PGRMC1O00264 195 aaKnown RBP15.68■□□□□ 0.1
VPS29-207ENST00000549970 PRICKLE3O43900 615 aaPredicted RBP15.68■□□□□ 0.1
VPS29-207ENST00000549970 MCM3P25205 808 aa15.68■□□□□ 0.1
VPS29-207ENST00000549970 CCNFP41002 786 aa15.68■□□□□ 0.1
VPS29-207ENST00000549970 FOLR3P41439 243 aa15.68■□□□□ 0.1
VPS29-207ENST00000549970 RRADP55042 308 aa15.68■□□□□ 0.1
VPS29-207ENST00000549970 ADARP55265 1226 aaKnown RBP15.68■□□□□ 0.1
VPS29-207ENST00000549970 SSPNQ14714 243 aa15.68■□□□□ 0.1
VPS29-207ENST00000549970 CYP1B1Q16678 543 aa15.68■□□□□ 0.1
VPS29-207ENST00000549970 NADK2Q4G0N4 442 aa15.68■□□□□ 0.1
VPS29-207ENST00000549970 NKAIN1Q4KMZ8 207 aa15.68■□□□□ 0.1
VPS29-207ENST00000549970 TTLL10Q6ZVT0 673 aa15.68■□□□□ 0.1
VPS29-207ENST00000549970 CENPUQ71F23 418 aa15.68■□□□□ 0.1
VPS29-207ENST00000549970 MED25Q71SY5 747 aa15.68■□□□□ 0.1
VPS29-207ENST00000549970 MRGPREQ86SM8 312 aa15.68■□□□□ 0.1
VPS29-207ENST00000549970 SLC35F6Q8N357 371 aa15.68■□□□□ 0.1
VPS29-207ENST00000549970 MAGEC3Q8TD91 643 aa15.68■□□□□ 0.1
VPS29-207ENST00000549970 DENND1AQ8TEH3 1009 aa15.68■□□□□ 0.1
VPS29-207ENST00000549970 DLG3Q92796 817 aa15.68■□□□□ 0.1
VPS29-207ENST00000549970 SERPINB12Q96P63 405 aa15.68■□□□□ 0.1
VPS29-207ENST00000549970 NAP1L3Q99457 506 aaPredicted RBP15.68■□□□□ 0.1
VPS29-207ENST00000549970 MIPEPQ99797 713 aa15.68■□□□□ 0.1
VPS29-207ENST00000549970 MLXIPLQ9NP71 852 aa15.68■□□□□ 0.1
VPS29-207ENST00000549970 G3BP2Q9UN86 482 aaKnown RBP15.68■□□□□ 0.1
VPS29-207ENST00000549970 FAM237BA0A1B0GVD1 139 aa15.67■□□□□ 0.1
VPS29-207ENST00000549970 CTAGE9A4FU28 777 aa15.67■□□□□ 0.1
VPS29-207ENST00000549970 SDR42E2A6NKP2 422 aa15.67■□□□□ 0.1
VPS29-207ENST00000549970 CNOT3O75175 753 aaKnown RBP15.67■□□□□ 0.1
VPS29-207ENST00000549970 CEACAM4O75871 244 aa15.67■□□□□ 0.1
VPS29-207ENST00000549970 MLNP12872 115 aa15.67■□□□□ 0.1
VPS29-207ENST00000549970 PKMP14618 531 aaKnown RBP15.67■□□□□ 0.1
VPS29-207ENST00000549970 RAPSNQ13702 412 aa15.67■□□□□ 0.1
VPS29-207ENST00000549970 GBX1Q14549 363 aa15.67■□□□□ 0.1
VPS29-207ENST00000549970 ANKRD20A4Q4UJ75 823 aa15.67■□□□□ 0.1
VPS29-207ENST00000549970 ACSBG2Q5FVE4 666 aa15.67■□□□□ 0.1
VPS29-207ENST00000549970 ZC3H12BQ5HYM0 836 aaKnown RBP15.67■□□□□ 0.1
VPS29-207ENST00000549970 ARMC3Q5W041 872 aa15.67■□□□□ 0.1
VPS29-207ENST00000549970 PAPD7Q5XG87 772 aaKnown RBP15.67■□□□□ 0.1
VPS29-207ENST00000549970 ZNF470Q6ECI4 717 aa15.67■□□□□ 0.1
VPS29-207ENST00000549970 TMEM151BQ8IW70 566 aa15.67■□□□□ 0.1
VPS29-207ENST00000549970 REXO1L1PQ8IX06 675 aa15.67■□□□□ 0.1
VPS29-207ENST00000549970 MCUQ8NE86 351 aa15.67■□□□□ 0.1
VPS29-207ENST00000549970 COG1Q8WTW3 980 aa15.67■□□□□ 0.1
VPS29-207ENST00000549970 MIB2Q96AX9 1013 aa15.67■□□□□ 0.1
VPS29-207ENST00000549970 SELENOSQ9BQE4 189 aa15.67■□□□□ 0.1
VPS29-207ENST00000549970 NUDT9Q9BW91 350 aa15.67■□□□□ 0.1
VPS29-207ENST00000549970 XAB2Q9HCS7 855 aaKnown RBP15.67■□□□□ 0.1
VPS29-207ENST00000549970 SPATA7Q9P0W8 599 aa15.67■□□□□ 0.1
VPS29-207ENST00000549970 VPS9D1Q9Y2B5 631 aa15.67■□□□□ 0.1
VPS29-207ENST00000549970 NEU2Q9Y3R4 380 aa15.67■□□□□ 0.1
VPS29-207ENST00000549970 ZNF451Q9Y4E5 1061 aa15.67■□□□□ 0.1
VPS29-207ENST00000549970 ANKRD12Q6UB98 2062 aa15.67■□□□□ 0.1
VPS29-207ENST00000549970 A0A1B0GX78 115 aa15.66■□□□□ 0.1
VPS29-207ENST00000549970 A0A1W2PPV9 198 aa15.66■□□□□ 0.1
VPS29-207ENST00000549970 MAGEB16A2A368 324 aa15.66■□□□□ 0.1
VPS29-207ENST00000549970 TTLL8A6PVC2 850 aa15.66■□□□□ 0.1
VPS29-207ENST00000549970 NRP2O60462 931 aa15.66■□□□□ 0.1
VPS29-207ENST00000549970 CTSVO60911 334 aa15.66■□□□□ 0.1
VPS29-207ENST00000549970 PHF2O75151 1096 aa15.66■□□□□ 0.1
VPS29-207ENST00000549970 FKBP9O95302 570 aa15.66■□□□□ 0.1
VPS29-207ENST00000549970 MATN4O95460 622 aa15.66■□□□□ 0.1
VPS29-207ENST00000549970 CD63P08962 238 aa15.66■□□□□ 0.1
VPS29-207ENST00000549970 ATP5DP30049 168 aa15.66■□□□□ 0.1
VPS29-207ENST00000549970 GCGRP47871 477 aa15.66■□□□□ 0.1
VPS29-207ENST00000549970 ARSFP54793 590 aa15.66■□□□□ 0.1
VPS29-207ENST00000549970 CTBP1Q13363 440 aa15.66■□□□□ 0.1
VPS29-207ENST00000549970 THOC5Q13769 683 aaKnown RBP15.66■□□□□ 0.1
VPS29-207ENST00000549970 FASTKQ14296 549 aaKnown RBP15.66■□□□□ 0.1
VPS29-207ENST00000549970 KLHL38Q2WGJ6 581 aa15.66■□□□□ 0.1
VPS29-207ENST00000549970 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.66■□□□□ 0.1
VPS29-207ENST00000549970 TCTE1Q5JU00 501 aa15.66■□□□□ 0.1
VPS29-207ENST00000549970 MRPL14Q6P1L8 145 aaKnown RBP15.66■□□□□ 0.1
VPS29-207ENST00000549970 DENND6AQ8IWF6 608 aa15.66■□□□□ 0.1
VPS29-207ENST00000549970 TTC29Q8NA56 475 aaPredicted RBP15.66■□□□□ 0.1
VPS29-207ENST00000549970 OR2L3Q8NG85 312 aa15.66■□□□□ 0.1
VPS29-207ENST00000549970 OR2Y1Q8NGV0 311 aa15.66■□□□□ 0.1
VPS29-207ENST00000549970 HMGCLL1Q8TB92 370 aa15.66■□□□□ 0.1
VPS29-207ENST00000549970 ZUFSPQ96AP4 578 aa15.66■□□□□ 0.1
VPS29-207ENST00000549970 PTERQ96BW5 349 aa15.66■□□□□ 0.1
VPS29-207ENST00000549970 IP6K3Q96PC2 410 aa15.66■□□□□ 0.1
VPS29-207ENST00000549970 OSBPL9Q96SU4 736 aa15.66■□□□□ 0.1
VPS29-207ENST00000549970 FBXO6Q9NRD1 293 aaPredicted RBP15.66■□□□□ 0.1
VPS29-207ENST00000549970 SLC22A11Q9NSA0 550 aa15.66■□□□□ 0.1
VPS29-207ENST00000549970 CUTCQ9NTM9 273 aa15.66■□□□□ 0.1
VPS29-207ENST00000549970 INTS10Q9NVR2 710 aaKnown RBP15.66■□□□□ 0.1
VPS29-207ENST00000549970 GPR83Q9NYM4 423 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms