RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 SLC19A2O60779 497 aa12.18□□□□□ -0.46
SCAF11-208ENST00000546534 RASAL1O95294 804 aa12.18□□□□□ -0.46
SCAF11-208ENST00000546534 CRTAMO95727 393 aa12.18□□□□□ -0.46
SCAF11-208ENST00000546534 PRR35P0CG20 571 aa12.18□□□□□ -0.46
SCAF11-208ENST00000546534 PRSS56P0CW18 603 aa12.18□□□□□ -0.46
SCAF11-208ENST00000546534 AGAP20933 346 aa12.18□□□□□ -0.46
SCAF11-208ENST00000546534 ADRA1AP35348 466 aa12.18□□□□□ -0.46
SCAF11-208ENST00000546534 GRIA3P42263 894 aa12.18□□□□□ -0.46
SCAF11-208ENST00000546534 ZNF140P52738 457 aaPredicted RBP12.18□□□□□ -0.46
SCAF11-208ENST00000546534 SMSP52788 366 aa12.18□□□□□ -0.46
SCAF11-208ENST00000546534 GEMP55040 296 aa12.18□□□□□ -0.46
SCAF11-208ENST00000546534 ZBED6P86452 979 aa12.18□□□□□ -0.46
SCAF11-208ENST00000546534 RBPJQ06330 500 aa12.18□□□□□ -0.46
SCAF11-208ENST00000546534 TYRO3Q06418 890 aa12.18□□□□□ -0.46
SCAF11-208ENST00000546534 KLC1Q07866 573 aa12.18□□□□□ -0.46
SCAF11-208ENST00000546534 MSLNQ13421 630 aaPredicted RBP12.18□□□□□ -0.46
SCAF11-208ENST00000546534 GRM7Q14831 915 aa12.18□□□□□ -0.46
SCAF11-208ENST00000546534 BRD3Q15059 726 aa12.18□□□□□ -0.46
SCAF11-208ENST00000546534 C3AR1Q16581 482 aa12.18□□□□□ -0.46
SCAF11-208ENST00000546534 GPR33Q49SQ1 333 aa12.18□□□□□ -0.46
SCAF11-208ENST00000546534 SERPINA9Q86WD7 417 aa12.18□□□□□ -0.46
SCAF11-208ENST00000546534 CEP97Q8IW35 865 aa12.18□□□□□ -0.46
SCAF11-208ENST00000546534 SIRT6Q8N6T7 355 aa12.18□□□□□ -0.46
SCAF11-208ENST00000546534 LMNTD1Q8N9Z9 388 aa12.18□□□□□ -0.46
SCAF11-208ENST00000546534 OR5K2Q8NHB8 316 aa12.18□□□□□ -0.46
SCAF11-208ENST00000546534 DNAJB8Q8NHS0 232 aa12.18□□□□□ -0.46
SCAF11-208ENST00000546534 BRIX1Q8TDN6 353 aaKnown RBP12.18□□□□□ -0.46
SCAF11-208ENST00000546534 ADAMTS18Q8TE60 1221 aa12.18□□□□□ -0.46
SCAF11-208ENST00000546534 TINAGQ9UJW2 476 aa12.18□□□□□ -0.46
SCAF11-208ENST00000546534 NSG1A0A0A6YYJ2 146 aa12.17□□□□□ -0.46
SCAF11-208ENST00000546534 LIN7AO14910 233 aaPredicted RBP12.17□□□□□ -0.46
SCAF11-208ENST00000546534 CST8O60676 142 aa12.17□□□□□ -0.46
SCAF11-208ENST00000546534 CLDN14O95500 239 aa12.17□□□□□ -0.46
SCAF11-208ENST00000546534 AP2A1O95782 977 aa12.17□□□□□ -0.46
SCAF11-208ENST00000546534 WDPCPO95876 746 aa12.17□□□□□ -0.46
SCAF11-208ENST00000546534 GSTM1P09488 218 aa12.17□□□□□ -0.46
SCAF11-208ENST00000546534 ZGLP1P0C6A0 271 aa12.17□□□□□ -0.46
SCAF11-208ENST00000546534 ESRRAP11474 423 aaPredicted RBP12.17□□□□□ -0.46
SCAF11-208ENST00000546534 TNNT1P13805 278 aa12.17□□□□□ -0.46
SCAF11-208ENST00000546534 ACRV1P26436 265 aa12.17□□□□□ -0.46
SCAF11-208ENST00000546534 MC4RP32245 332 aa12.17□□□□□ -0.46
SCAF11-208ENST00000546534 ARHGAP25P42331 645 aa12.17□□□□□ -0.46
SCAF11-208ENST00000546534 CDKN2BP42772 138 aa12.17□□□□□ -0.46
SCAF11-208ENST00000546534 NSG1P42857 185 aa12.17□□□□□ -0.46
SCAF11-208ENST00000546534 CARSP49589 748 aaKnown RBP12.17□□□□□ -0.46
SCAF11-208ENST00000546534 CASP6P55212 293 aa12.17□□□□□ -0.46
SCAF11-208ENST00000546534 GSTM4Q03013 218 aa12.17□□□□□ -0.46
SCAF11-208ENST00000546534 TLE4Q04727 773 aa12.17□□□□□ -0.46
SCAF11-208ENST00000546534 TFDP2Q14188 446 aa12.17□□□□□ -0.46
SCAF11-208ENST00000546534 ODF2Q5BJF6 829 aa12.17□□□□□ -0.46
SCAF11-208ENST00000546534 LRRC38Q5VT99 294 aa12.17□□□□□ -0.46
SCAF11-208ENST00000546534 YOD1Q5VVQ6 348 aaPredicted RBP12.17□□□□□ -0.46
SCAF11-208ENST00000546534 ATG9BQ674R7 924 aa12.17□□□□□ -0.46
SCAF11-208ENST00000546534 KAZNQ674X7 775 aa12.17□□□□□ -0.46
SCAF11-208ENST00000546534 NAPRTQ6XQN6 538 aa12.17□□□□□ -0.46
SCAF11-208ENST00000546534 NLRP9Q7RTR0 991 aa12.17□□□□□ -0.46
SCAF11-208ENST00000546534 TAS2R42Q7RTR8 314 aa12.17□□□□□ -0.46
SCAF11-208ENST00000546534 LINC01555Q8NAE3 123 aa12.17□□□□□ -0.46
SCAF11-208ENST00000546534 SLC35G2Q8TBE7 412 aa12.17□□□□□ -0.46
SCAF11-208ENST00000546534 STT3BQ8TCJ2 826 aa12.17□□□□□ -0.46
SCAF11-208ENST00000546534 CHTF18Q8WVB6 975 aa12.17□□□□□ -0.46
SCAF11-208ENST00000546534 MIEF2Q96C03 454 aa12.17□□□□□ -0.46
SCAF11-208ENST00000546534 SPOCK3Q9BQ16 436 aa12.17□□□□□ -0.46
SCAF11-208ENST00000546534 NAT10Q9H0A0 1025 aaKnown RBP12.17□□□□□ -0.46
SCAF11-208ENST00000546534 GBA3Q9H227 469 aa12.17□□□□□ -0.46
SCAF11-208ENST00000546534 MCCC2Q9HCC0 563 aa12.17□□□□□ -0.46
SCAF11-208ENST00000546534 IL1RAPL1Q9NZN1 696 aa12.17□□□□□ -0.46
SCAF11-208ENST00000546534 C3orf18Q9UK00 162 aa12.17□□□□□ -0.46
SCAF11-208ENST00000546534 TRHDEQ9UKU6 1024 aa12.17□□□□□ -0.46
SCAF11-208ENST00000546534 MRPS2Q9Y399 296 aaKnown RBP12.17□□□□□ -0.46
SCAF11-208ENST00000546534 NEU2Q9Y3R4 380 aa12.17□□□□□ -0.46
SCAF11-208ENST00000546534 PCNX1Q96RV3 2341 aa12.17□□□□□ -0.46
SCAF11-208ENST00000546534 SMTNL1A8MU46 457 aa12.16□□□□□ -0.46
SCAF11-208ENST00000546534 ANXA9O76027 345 aa12.16□□□□□ -0.46
SCAF11-208ENST00000546534 AP2A2O94973 939 aa12.16□□□□□ -0.46
SCAF11-208ENST00000546534 BMP10O95393 424 aa12.16□□□□□ -0.46
SCAF11-208ENST00000546534 MED26O95402 600 aa12.16□□□□□ -0.46
SCAF11-208ENST00000546534 SERPINC1P01008 464 aa12.16□□□□□ -0.46
SCAF11-208ENST00000546534 SERPINA7P05543 415 aa12.16□□□□□ -0.46
SCAF11-208ENST00000546534 COX6A1P12074 109 aa12.16□□□□□ -0.46
SCAF11-208ENST00000546534 FDXRP22570 491 aa12.16□□□□□ -0.46
SCAF11-208ENST00000546534 PMP22Q01453 160 aa12.16□□□□□ -0.46
SCAF11-208ENST00000546534 OCA2Q04671 838 aa12.16□□□□□ -0.46
SCAF11-208ENST00000546534 TAZQ16635 292 aa12.16□□□□□ -0.46
SCAF11-208ENST00000546534 DBN1Q16643 649 aa12.16□□□□□ -0.46
SCAF11-208ENST00000546534 ZC3H12BQ5HYM0 836 aaKnown RBP12.16□□□□□ -0.46
SCAF11-208ENST00000546534 TCTE1Q5JU00 501 aa12.16□□□□□ -0.46
SCAF11-208ENST00000546534 FAAH2Q6GMR7 532 aa12.16□□□□□ -0.46
SCAF11-208ENST00000546534 FIGLAQ6QHK4 219 aa12.16□□□□□ -0.46
SCAF11-208ENST00000546534 NDUFAF7Q7L592 441 aa12.16□□□□□ -0.46
SCAF11-208ENST00000546534 PIANPQ8IYJ0 282 aa12.16□□□□□ -0.46
SCAF11-208ENST00000546534 C2orf73Q8N5S3 287 aaPredicted RBP12.16□□□□□ -0.46
SCAF11-208ENST00000546534 TTC29Q8NA56 475 aaPredicted RBP12.16□□□□□ -0.46
SCAF11-208ENST00000546534 ELMO1Q92556 727 aa12.16□□□□□ -0.46
SCAF11-208ENST00000546534 P3H4Q92791 437 aa12.16□□□□□ -0.46
SCAF11-208ENST00000546534 HAUS1Q96CS2 278 aa12.16□□□□□ -0.46
SCAF11-208ENST00000546534 DNAJC1Q96KC8 554 aaKnown RBP12.16□□□□□ -0.46
SCAF11-208ENST00000546534 ZNF285Q96NJ3 590 aa12.16□□□□□ -0.46
SCAF11-208ENST00000546534 QKIQ96PU8 341 aaKnown RBP eCLIP12.16□□□□□ -0.46
SCAF11-208ENST00000546534 C19orf43Q9BQ61 176 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms