RNA–Protein interactions for RNA: ENST00000545870.1

PRKAB1-209, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 3

Gene PRKAB1, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-209ENST00000545870 TDP1Q9NUW8 608 aa8.12□□□□□ -1.11
PRKAB1-209ENST00000545870 DCAF13Q9NV06 445 aaKnown RBP8.12□□□□□ -1.11
PRKAB1-209ENST00000545870 VAPAQ9P0L0 249 aa8.12□□□□□ -1.11
PRKAB1-209ENST00000545870 TSR3Q9UJK0 312 aaKnown RBP8.12□□□□□ -1.11
PRKAB1-209ENST00000545870 TMPRSS11EQ9UL52 423 aa8.12□□□□□ -1.11
PRKAB1-209ENST00000545870 INVSQ9Y283 1065 aa8.12□□□□□ -1.11
PRKAB1-209ENST00000545870 PCDHGA11Q9Y5H2 935 aa8.12□□□□□ -1.11
PRKAB1-209ENST00000545870 GMEB1Q9Y692 573 aa8.12□□□□□ -1.11
PRKAB1-209ENST00000545870 OBSL1O75147 1896 aa8.12□□□□□ -1.11
PRKAB1-209ENST00000545870 CCDC160A6NGH7 325 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 H0YIV9 168 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 UPK1AO00322 258 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 PLOD2O00469 737 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 PER2O15055 1255 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 XYLBO75191 536 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 PSIP1O75475 530 aaKnown RBP8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 TRMUO75648 421 aaKnown RBP8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 MYO1DO94832 1006 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 CATP04040 527 aaKnown RBP8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 ALPLP05186 524 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 THRBP10828 461 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 TYRP14679 529 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 PPIBP23284 216 aaKnown RBP8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 MAP4P27816 1152 aaKnown RBP8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 WEE1P30291 646 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 MTHFRP42898 656 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 ASMTP46597 345 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 GZMMP51124 257 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 NUP107P57740 925 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 HSPA14Q0VDF9 509 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 TOP3AQ13472 1001 aaPredicted RBP8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 CBX2Q14781 532 aaPredicted RBP8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 ZNF77Q15935 545 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 CPSF6Q16630 551 aaKnown RBP eCLIP8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 DUOXA1Q1HG43 343 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 ZNF284Q2VY69 593 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 PTCHD3Q3KNS1 767 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 SGO1Q5FBB7 561 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 RBM48Q5RL73 367 aaKnown RBP8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 HENMT1Q5T8I9 393 aaKnown RBP8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 AP1ARQ63HQ0 302 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 ERAP2Q6P179 960 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 ZNF773Q6PK81 442 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 SUSD1Q6UWL2 747 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 ZNF765Q7L2R6 523 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 LPCAT2Q7L5N7 544 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 CYP2U1Q7Z449 544 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 SERPINA11Q86U17 422 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 ADIPOR2Q86V24 386 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 HIPK1Q86Z02 1210 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 ZDHHC13Q8IUH4 622 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 FAM110BQ8TC76 370 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 MAGEE2Q8TD90 523 aaPredicted RBP8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 FRS2Q8WU20 508 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 TMBIM1Q969X1 311 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 FAM162AQ96A26 154 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 CXorf40BQ96DE9 158 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 FAM120BQ96EK7 910 aaKnown RBP8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 SLC47A1Q96FL8 570 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 HBEGFQ99075 208 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 SEPHS2Q99611 448 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 TRIM8Q9BZR9 551 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 BRF2Q9HAW0 419 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 IL23AQ9NPF7 189 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 SERHLQ9NQF3 203 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 FARSBQ9NSD9 589 aaKnown RBP8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 FAM120CQ9NX05 1096 aaKnown RBP8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 SLC25A37Q9NYZ2 338 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 GPRC5BQ9NZH0 403 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 TMEM9Q9P0T7 183 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 IFT80Q9P2H3 777 aaPredicted RBP8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 LIMD1Q9UGP4 676 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 ADGRE2Q9UHX3 823 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 FBXO10Q9UK96 956 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 CDH7Q9ULB5 785 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 SAMD4AQ9UPU9 718 aaKnown RBP8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 CORO2BQ9UQ03 480 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 RUVBL1Q9Y265 456 aaKnown RBP8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 HTTP42858 3142 aa8.11□□□□□ -1.11
PRKAB1-209ENST00000545870 EME2A4GXA9 379 aaPredicted RBP8.1□□□□□ -1.11
PRKAB1-209ENST00000545870 A8MX80 341 aa8.1□□□□□ -1.11
PRKAB1-209ENST00000545870 EVPLLA8MZ36 301 aa8.1□□□□□ -1.11
PRKAB1-209ENST00000545870 NEDD8-MDP1E9PL57 170 aa8.1□□□□□ -1.11
PRKAB1-209ENST00000545870 G3V2T6 193 aa8.1□□□□□ -1.11
PRKAB1-209ENST00000545870 H0Y858 1186 aa8.1□□□□□ -1.11
PRKAB1-209ENST00000545870 ZNF197O14709 1029 aa8.1□□□□□ -1.11
PRKAB1-209ENST00000545870 CCL16O15467 120 aa8.1□□□□□ -1.11
PRKAB1-209ENST00000545870 SGTAO43765 313 aa8.1□□□□□ -1.11
PRKAB1-209ENST00000545870 DPM1O60762 260 aa8.1□□□□□ -1.11
PRKAB1-209ENST00000545870 ATG13O75143 517 aa8.1□□□□□ -1.11
PRKAB1-209ENST00000545870 MOSPD3O75425 235 aa8.1□□□□□ -1.11
PRKAB1-209ENST00000545870 CREG1O75629 220 aa8.1□□□□□ -1.11
PRKAB1-209ENST00000545870 DNAJB5O75953 348 aa8.1□□□□□ -1.11
PRKAB1-209ENST00000545870 CCNDBP1O95273 360 aa8.1□□□□□ -1.11
PRKAB1-209ENST00000545870 GNAO1P09471 354 aa8.1□□□□□ -1.11
PRKAB1-209ENST00000545870 LINC00271P0C7V0 271 aa8.1□□□□□ -1.11
PRKAB1-209ENST00000545870 ETS2P15036 469 aa8.1□□□□□ -1.11
PRKAB1-209ENST00000545870 CSF2RAP15509 400 aa8.1□□□□□ -1.11
PRKAB1-209ENST00000545870 TIMP2P16035 220 aa8.1□□□□□ -1.11
PRKAB1-209ENST00000545870 JUNBP17275 347 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms