RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 EFCAB9A8MZ26 197 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 NPIPB8E9PQR5 432 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 FFAR3O14843 346 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 GPR42O15529 346 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 TLR5O60602 858 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 MYO1DO94832 1006 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 PTTG1O95997 202 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 IGHA2P01877 340 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 KRT6AP02538 564 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 KRT6BP04259 564 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 AKR1A1P14550 325 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 EPB42P16452 691 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 CD36P16671 472 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 PTPN2P17706 415 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 S100A1P23297 94 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 MAPK1P28482 360 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 ALDH4A1P30038 563 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 SLC6A4P31645 630 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 KRT20P35900 424 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 GSSP48637 474 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 KRT6CP48668 564 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 HMGCS1Q01581 520 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 KCNJ8Q15842 424 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 NDUFA5Q16718 116 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 PGS1Q32NB8 556 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 CARD16Q5EG05 197 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 CDKL4Q5MAI5 379 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 PTRHD1Q6GMV3 140 aaKnown RBP8.54□□□□□ -1.04
TDP1-204ENST00000545686 LAIR1Q6GTX8 287 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 CCDC81Q6ZN84 652 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 CHST9Q7L1S5 443 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 GALNT5Q7Z7M9 940 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 RBFAQ8N0V3 343 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 CFAP52Q8N1V2 620 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 CHAC2Q8WUX2 184 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 SLC38A4Q969I6 547 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 ULK4Q96C45 1275 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 EXOC2Q96KP1 924 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 HHIPQ96QV1 700 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 EGFL8Q99944 293 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 SPON2Q9BUD6 331 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 SLC6A13Q9NSD5 602 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 RNF181Q9P0P0 153 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 ZNF229Q9UJW7 825 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 ACTL7AQ9Y615 435 aa8.54□□□□□ -1.04
TDP1-204ENST00000545686 METTL15A6NJ78 407 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 IQCF5A8MTL0 148 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 ARVCFO00192 962 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 MAN1A2O60476 641 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 FABP3P05413 133 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 RHOCP08134 193 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 FSHRP23945 695 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 HMGCLP35914 325 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 SLC11A2P49281 568 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 PCYT1AP49585 367 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 ITGA1P56199 1179 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 LSM3P62310 102 aaKnown RBP8.53□□□□□ -1.04
TDP1-204ENST00000545686 SELENBP1Q13228 472 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 KRR1Q13601 381 aaKnown RBP8.53□□□□□ -1.04
TDP1-204ENST00000545686 DGCR6Q14129 220 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 SIM2Q14190 667 aaPredicted RBP8.53□□□□□ -1.04
TDP1-204ENST00000545686 TBCEQ15813 527 aaPredicted RBP8.53□□□□□ -1.04
TDP1-204ENST00000545686 ZNF404Q494X3 552 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 GGTA1PQ4G0N0 100 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 LYPLAL1Q5VWZ2 237 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 FAHD1Q6P587 224 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 CEP68Q76N32 757 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 PAGE2Q7Z2X7 111 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 DSG4Q86SJ6 1040 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 HORMAD1Q86X24 394 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 LYSMD2Q8IV50 215 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 CPA6Q8N4T0 437 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 ALOXE3Q9BYJ1 711 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 CIPCQ9C0C6 399 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 NXF2Q9GZY0 626 aaKnown RBP8.53□□□□□ -1.04
TDP1-204ENST00000545686 DCSTAMPQ9H295 470 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 MOV10Q9HCE1 1003 aaKnown RBP8.53□□□□□ -1.04
TDP1-204ENST00000545686 BPIFA1Q9NP55 256 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 KRT84Q9NSB2 600 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 KIF17Q9P2E2 1029 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 ABCG2Q9UNQ0 655 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 PCDHGC4Q9Y5F7 938 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 ZFP37Q9Y6Q3 630 aaPredicted RBP8.53□□□□□ -1.04
TDP1-204ENST00000545686 MYADML2A6NDP7 307 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 AGAP5A6NIR3 686 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 EVPLLA8MZ36 301 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 NUAK1O60285 661 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 CLDN9O95484 217 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 CYP4B1P13584 511 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 HOXA9P31269 272 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 THPOP40225 353 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 TRPC1P48995 793 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 ZNF45Q02386 682 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 GTF2H3Q13889 308 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 CCL14Q16627 93 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 CATSPEREQ5SY80 951 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 MLIPQ5VWP3 458 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 NCEH1Q6PIU2 408 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 GLB1LQ6UWU2 654 aa8.53□□□□□ -1.04
TDP1-204ENST00000545686 USP43Q70EL4 1123 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms