RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 GTF2IRD2Q86UP8 949 aa14.66□□□□□ -0.06
USP28-214ENST00000545540 RBFAQ8N0V3 343 aa14.66□□□□□ -0.06
USP28-214ENST00000545540 EID3Q8N140 333 aa14.66□□□□□ -0.06
USP28-214ENST00000545540 LILRA3Q8N6C8 439 aaPredicted RBP14.66□□□□□ -0.06
USP28-214ENST00000545540 DOK1Q99704 481 aa14.66□□□□□ -0.06
USP28-214ENST00000545540 C1orf109Q9NX04 203 aa14.66□□□□□ -0.06
USP28-214ENST00000545540 MYO15AQ9UKN7 3530 aa14.66□□□□□ -0.06
USP28-214ENST00000545540 FUOMA2VDF0 154 aa14.66□□□□□ -0.06
USP28-214ENST00000545540 OR2AG2A6NM03 316 aa14.66□□□□□ -0.06
USP28-214ENST00000545540 RFXANKO14593 260 aa14.66□□□□□ -0.06
USP28-214ENST00000545540 CPNE6O95741 557 aa14.66□□□□□ -0.06
USP28-214ENST00000545540 OPN1SWP03999 348 aa14.66□□□□□ -0.06
USP28-214ENST00000545540 DGKAP23743 735 aa14.66□□□□□ -0.06
USP28-214ENST00000545540 USP39Q53GS9 565 aaKnown RBP14.66□□□□□ -0.06
USP28-214ENST00000545540 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.66□□□□□ -0.06
USP28-214ENST00000545540 SLC16A12Q6ZSM3 486 aa14.66□□□□□ -0.06
USP28-214ENST00000545540 SLCO6A1Q86UG4 719 aa14.66□□□□□ -0.06
USP28-214ENST00000545540 ALDH16A1Q8IZ83 802 aa14.66□□□□□ -0.06
USP28-214ENST00000545540 OR52J3Q8NH60 311 aa14.66□□□□□ -0.06
USP28-214ENST00000545540 COX4I2Q96KJ9 171 aa14.66□□□□□ -0.06
USP28-214ENST00000545540 MTG2Q9H4K7 406 aa14.66□□□□□ -0.06
USP28-214ENST00000545540 SERHLQ9NQF3 203 aa14.66□□□□□ -0.06
USP28-214ENST00000545540 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.66□□□□□ -0.06
USP28-214ENST00000545540 ANGPTL1O95841 491 aa14.65□□□□□ -0.06
USP28-214ENST00000545540 TPP2P29144 1249 aaPredicted RBP14.65□□□□□ -0.06
USP28-214ENST00000545540 TTC23Q5W5X9 447 aa14.65□□□□□ -0.06
USP28-214ENST00000545540 LRRC66Q68CR7 880 aa14.65□□□□□ -0.06
USP28-214ENST00000545540 PDE12Q6L8Q7 609 aaKnown RBP14.65□□□□□ -0.06
USP28-214ENST00000545540 NEK5Q6P3R8 708 aa14.65□□□□□ -0.06
USP28-214ENST00000545540 UBE2R2Q712K3 238 aaPredicted RBP14.65□□□□□ -0.06
USP28-214ENST00000545540 GOLM1Q8NBJ4 401 aa14.65□□□□□ -0.06
USP28-214ENST00000545540 ZNF420Q8TAQ5 688 aaPredicted RBP14.65□□□□□ -0.06
USP28-214ENST00000545540 ELMO1Q92556 727 aa14.65□□□□□ -0.06
USP28-214ENST00000545540 NRBF2Q96F24 287 aa14.65□□□□□ -0.06
USP28-214ENST00000545540 MUC13Q9H3R2 512 aa14.65□□□□□ -0.06
USP28-214ENST00000545540 SACM1LQ9NTJ5 587 aa14.65□□□□□ -0.06
USP28-214ENST00000545540 DCAF13Q9NV06 445 aaKnown RBP14.65□□□□□ -0.06
USP28-214ENST00000545540 GNPTGQ9UJJ9 305 aa14.65□□□□□ -0.06
USP28-214ENST00000545540 RIMKLBQ9ULI2 386 aa14.65□□□□□ -0.06
USP28-214ENST00000545540 A0A1W2PQ45 241 aaPredicted RBP14.65□□□□□ -0.06
USP28-214ENST00000545540 A0A1W2PQY0 241 aa14.65□□□□□ -0.06
USP28-214ENST00000545540 YY2O15391 372 aa14.65□□□□□ -0.06
USP28-214ENST00000545540 CLPXO76031 633 aa14.65□□□□□ -0.06
USP28-214ENST00000545540 IGFBP5P24593 272 aa14.65□□□□□ -0.06
USP28-214ENST00000545540 VLDLRP98155 873 aa14.65□□□□□ -0.06
USP28-214ENST00000545540 CDK5R2Q13319 367 aa14.65□□□□□ -0.06
USP28-214ENST00000545540 GPRC6AQ5T6X5 926 aa14.65□□□□□ -0.06
USP28-214ENST00000545540 IRAK1BP1Q5VVH5 260 aa14.65□□□□□ -0.06
USP28-214ENST00000545540 DNAJB7Q7Z6W7 309 aaPredicted RBP14.65□□□□□ -0.06
USP28-214ENST00000545540 GPR156Q8NFN8 814 aa14.65□□□□□ -0.06
USP28-214ENST00000545540 OR8J3Q8NGG0 315 aa14.65□□□□□ -0.06
USP28-214ENST00000545540 CLMPQ9H6B4 373 aa14.65□□□□□ -0.06
USP28-214ENST00000545540 PDP1Q9P0J1 537 aaPredicted RBP14.65□□□□□ -0.06
USP28-214ENST00000545540 BTBD3Q9Y2F9 522 aa14.65□□□□□ -0.06
USP28-214ENST00000545540 OARD1Q9Y530 152 aa14.65□□□□□ -0.06
USP28-214ENST00000545540 FZD6O60353 706 aa14.64□□□□□ -0.07
USP28-214ENST00000545540 CLDN9O95484 217 aa14.64□□□□□ -0.07
USP28-214ENST00000545540 ACRV1P26436 265 aa14.64□□□□□ -0.07
USP28-214ENST00000545540 DAPP51397 102 aa14.64□□□□□ -0.07
USP28-214ENST00000545540 B4GALNT1Q00973 533 aa14.64□□□□□ -0.07
USP28-214ENST00000545540 IRF5Q13568 498 aa14.64□□□□□ -0.07
USP28-214ENST00000545540 SKIV2LQ15477 1246 aaKnown RBP14.64□□□□□ -0.07
USP28-214ENST00000545540 CROCCP3Q8IVE0 287 aa14.64□□□□□ -0.07
USP28-214ENST00000545540 FKBP10Q96AY3 582 aa14.64□□□□□ -0.07
USP28-214ENST00000545540 PANX1Q96RD7 426 aa14.64□□□□□ -0.07
USP28-214ENST00000545540 ZNF334Q9HCZ1 680 aaPredicted RBP14.64□□□□□ -0.07
USP28-214ENST00000545540 DAPK2Q9UIK4 370 aa14.64□□□□□ -0.07
USP28-214ENST00000545540 EYSQ5T1H1 3165 aa14.64□□□□□ -0.07
USP28-214ENST00000545540 ZSCAN9O15535 394 aaPredicted RBP14.64□□□□□ -0.07
USP28-214ENST00000545540 VIPP01282 170 aa14.64□□□□□ -0.07
USP28-214ENST00000545540 TRBC1P01850 177 aa14.64□□□□□ -0.07
USP28-214ENST00000545540 CKMP06732 381 aa14.64□□□□□ -0.07
USP28-214ENST00000545540 ACPPP15309 386 aa14.64□□□□□ -0.07
USP28-214ENST00000545540 SDC1P18827 310 aa14.64□□□□□ -0.07
USP28-214ENST00000545540 WEE1P30291 646 aa14.64□□□□□ -0.07
USP28-214ENST00000545540 MASP1P48740 699 aa14.64□□□□□ -0.07
USP28-214ENST00000545540 MVKQ03426 396 aa14.64□□□□□ -0.07
USP28-214ENST00000545540 ABRQ12979 859 aa14.64□□□□□ -0.07
USP28-214ENST00000545540 NPTX1Q15818 432 aa14.64□□□□□ -0.07
USP28-214ENST00000545540 ADPRMQ3LIE5 342 aa14.64□□□□□ -0.07
USP28-214ENST00000545540 FAM26DQ5JW98 314 aa14.64□□□□□ -0.07
USP28-214ENST00000545540 SNX20Q7Z614 316 aa14.64□□□□□ -0.07
USP28-214ENST00000545540 CMTM8Q8IZV2 173 aa14.64□□□□□ -0.07
USP28-214ENST00000545540 P2RY13Q9BPV8 354 aa14.64□□□□□ -0.07
USP28-214ENST00000545540 RBM4BQ9BQ04 359 aaKnown RBP14.64□□□□□ -0.07
USP28-214ENST00000545540 RBM4Q9BWF3 364 aaKnown RBP14.64□□□□□ -0.07
USP28-214ENST00000545540 TMEM121BQ9BXQ6 578 aaPredicted RBP14.64□□□□□ -0.07
USP28-214ENST00000545540 GORASP2Q9H8Y8 452 aa14.64□□□□□ -0.07
USP28-214ENST00000545540 SLCO3A1Q9UIG8 710 aa14.64□□□□□ -0.07
USP28-214ENST00000545540 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.64□□□□□ -0.07
USP28-214ENST00000545540 TMEM202A6NGA9 273 aa14.64□□□□□ -0.07
USP28-214ENST00000545540 NDUFS2O75306 463 aa14.64□□□□□ -0.07
USP28-214ENST00000545540 UGT2B4P06133 528 aa14.64□□□□□ -0.07
USP28-214ENST00000545540 LCKP06239 509 aa14.64□□□□□ -0.07
USP28-214ENST00000545540 CBX3Q13185 183 aa14.64□□□□□ -0.07
USP28-214ENST00000545540 MOGQ16653 247 aa14.64□□□□□ -0.07
USP28-214ENST00000545540 SOWAHCQ53LP3 525 aaPredicted RBP14.64□□□□□ -0.07
USP28-214ENST00000545540 GPR153Q6NV75 609 aa14.64□□□□□ -0.07
USP28-214ENST00000545540 BBS7Q8IWZ6 715 aa14.64□□□□□ -0.07
USP28-214ENST00000545540 STK40Q8N2I9 435 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms