RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 SLC19A2O60779 497 aa14.06□□□□□ -0.16
RTN3-214ENST00000545432 FKBP9O95302 570 aa14.06□□□□□ -0.16
RTN3-214ENST00000545432 ZGLP1P0C6A0 271 aa14.06□□□□□ -0.16
RTN3-214ENST00000545432 COX6A1P12074 109 aa14.06□□□□□ -0.16
RTN3-214ENST00000545432 HOXB4P17483 251 aaPredicted RBP14.06□□□□□ -0.16
RTN3-214ENST00000545432 PKLRP30613 574 aa14.06□□□□□ -0.16
RTN3-214ENST00000545432 SLC1A1P43005 524 aa14.06□□□□□ -0.16
RTN3-214ENST00000545432 OR1D4P47884 311 aa14.06□□□□□ -0.16
RTN3-214ENST00000545432 RAB28P51157 221 aa14.06□□□□□ -0.16
RTN3-214ENST00000545432 SMSP52788 366 aa14.06□□□□□ -0.16
RTN3-214ENST00000545432 RBPJQ06330 500 aa14.06□□□□□ -0.16
RTN3-214ENST00000545432 CACNG1Q06432 222 aa14.06□□□□□ -0.16
RTN3-214ENST00000545432 GRB7Q14451 532 aa14.06□□□□□ -0.16
RTN3-214ENST00000545432 TCEAL1Q15170 157 aa14.06□□□□□ -0.16
RTN3-214ENST00000545432 PIANPQ8IYJ0 282 aa14.06□□□□□ -0.16
RTN3-214ENST00000545432 STT3BQ8TCJ2 826 aa14.06□□□□□ -0.16
RTN3-214ENST00000545432 BRIX1Q8TDN6 353 aaKnown RBP14.06□□□□□ -0.16
RTN3-214ENST00000545432 ZUFSPQ96AP4 578 aa14.06□□□□□ -0.16
RTN3-214ENST00000545432 SLC22A18Q96BI1 424 aa14.06□□□□□ -0.16
RTN3-214ENST00000545432 MAGEB10Q96LZ2 347 aaPredicted RBP14.06□□□□□ -0.16
RTN3-214ENST00000545432 IRAK4Q9NWZ3 460 aa14.06□□□□□ -0.16
RTN3-214ENST00000545432 RSPH14Q9UHP6 348 aa14.06□□□□□ -0.16
RTN3-214ENST00000545432 LOC102723996A0A087X1L8 192 aa14.05□□□□□ -0.16
RTN3-214ENST00000545432 TARM1B6A8C7 271 aa14.05□□□□□ -0.16
RTN3-214ENST00000545432 QSOX1O00391 747 aa14.05□□□□□ -0.16
RTN3-214ENST00000545432 KDM1AO60341 852 aa14.05□□□□□ -0.16
RTN3-214ENST00000545432 MED26O95402 600 aa14.05□□□□□ -0.16
RTN3-214ENST00000545432 WDPCPO95876 746 aa14.05□□□□□ -0.16
RTN3-214ENST00000545432 S1PR4O95977 384 aa14.05□□□□□ -0.16
RTN3-214ENST00000545432 ATXN8OSP0DMR3 200 aa14.05□□□□□ -0.16
RTN3-214ENST00000545432 CD1EP15812 388 aa14.05□□□□□ -0.16
RTN3-214ENST00000545432 MCM3P25205 808 aa14.05□□□□□ -0.16
RTN3-214ENST00000545432 MC4RP32245 332 aa14.05□□□□□ -0.16
RTN3-214ENST00000545432 ITIH4Q14624 930 aa14.05□□□□□ -0.16
RTN3-214ENST00000545432 IQCB1Q15051 598 aa14.05□□□□□ -0.16
RTN3-214ENST00000545432 C3AR1Q16581 482 aa14.05□□□□□ -0.16
RTN3-214ENST00000545432 PRMT9Q6P2P2 845 aa14.05□□□□□ -0.16
RTN3-214ENST00000545432 FIGLAQ6QHK4 219 aa14.05□□□□□ -0.16
RTN3-214ENST00000545432 NLRP9Q7RTR0 991 aa14.05□□□□□ -0.16
RTN3-214ENST00000545432 CCDC110Q8TBZ0 833 aa14.05□□□□□ -0.16
RTN3-214ENST00000545432 P3H4Q92791 437 aa14.05□□□□□ -0.16
RTN3-214ENST00000545432 ZNF304Q9HCX3 659 aa14.05□□□□□ -0.16
RTN3-214ENST00000545432 PTGFRNQ9P2B2 879 aa14.05□□□□□ -0.16
RTN3-214ENST00000545432 FEZ2Q9UHY8 353 aaPredicted RBP14.05□□□□□ -0.16
RTN3-214ENST00000545432 C3orf18Q9UK00 162 aa14.05□□□□□ -0.16
RTN3-214ENST00000545432 KLHL20Q9Y2M5 609 aa14.05□□□□□ -0.16
RTN3-214ENST00000545432 LUC7L2Q9Y383 392 aaKnown RBP14.05□□□□□ -0.16
RTN3-214ENST00000545432 PRSS21Q9Y6M0 314 aa14.05□□□□□ -0.16
RTN3-214ENST00000545432 ZNF469Q96JG9 3925 aaPredicted RBP14.05□□□□□ -0.16
RTN3-214ENST00000545432 ANKHD1Q8IWZ3 2542 aaKnown RBP14.05□□□□□ -0.16
RTN3-214ENST00000545432 IGHV1-45A0A0A0MS14 117 aa14.04□□□□□ -0.16
RTN3-214ENST00000545432 NSG1A0A0A6YYJ2 146 aa14.04□□□□□ -0.16
RTN3-214ENST00000545432 MAP2K7O14733 419 aa14.04□□□□□ -0.16
RTN3-214ENST00000545432 PRAMEF2O60811 474 aa14.04□□□□□ -0.16
RTN3-214ENST00000545432 PRSS56P0CW18 603 aa14.04□□□□□ -0.16
RTN3-214ENST00000545432 CD9P21926 228 aa14.04□□□□□ -0.16
RTN3-214ENST00000545432 NSG1P42857 185 aa14.04□□□□□ -0.16
RTN3-214ENST00000545432 EMP3P54852 163 aa14.04□□□□□ -0.16
RTN3-214ENST00000545432 OLIG2Q13516 323 aa14.04□□□□□ -0.16
RTN3-214ENST00000545432 DBN1Q16643 649 aa14.04□□□□□ -0.16
RTN3-214ENST00000545432 PACS1Q6VY07 963 aa14.04□□□□□ -0.16
RTN3-214ENST00000545432 LAPTM4BQ86VI4 370 aa14.04□□□□□ -0.16
RTN3-214ENST00000545432 TMTC1Q8IUR5 882 aa14.04□□□□□ -0.16
RTN3-214ENST00000545432 DTWD1Q8N5C7 304 aa14.04□□□□□ -0.16
RTN3-214ENST00000545432 TTC29Q8NA56 475 aaPredicted RBP14.04□□□□□ -0.16
RTN3-214ENST00000545432 CPLX3Q8WVH0 158 aa14.04□□□□□ -0.16
RTN3-214ENST00000545432 MIEF2Q96C03 454 aa14.04□□□□□ -0.16
RTN3-214ENST00000545432 C8orf44Q96CB5 159 aa14.04□□□□□ -0.16
RTN3-214ENST00000545432 CDKN2AIPNLQ96HQ2 116 aa14.04□□□□□ -0.16
RTN3-214ENST00000545432 APOL2Q9BQE5 337 aa14.04□□□□□ -0.16
RTN3-214ENST00000545432 TMUB1Q9BVT8 246 aa14.04□□□□□ -0.16
RTN3-214ENST00000545432 NLE1Q9NVX2 485 aaPredicted RBP14.04□□□□□ -0.16
RTN3-214ENST00000545432 ZNF282Q9UDV7 671 aaPredicted RBP14.04□□□□□ -0.16
RTN3-214ENST00000545432 PLAGL1Q9UM63 463 aa14.04□□□□□ -0.16
RTN3-214ENST00000545432 TDRKHQ9Y2W6 561 aaKnown RBP14.04□□□□□ -0.16
RTN3-214ENST00000545432 AAR2Q9Y312 384 aaKnown RBP14.04□□□□□ -0.16
RTN3-214ENST00000545432 MEMO1Q9Y316 297 aa14.04□□□□□ -0.16
RTN3-214ENST00000545432 hCG_1818297A0A087WSY0 165 aa14.03□□□□□ -0.16
RTN3-214ENST00000545432 FAM221AA4D161 298 aa14.03□□□□□ -0.16
RTN3-214ENST00000545432 OR5H15A6NDH6 313 aa14.03□□□□□ -0.16
RTN3-214ENST00000545432 CCL22O00626 93 aa14.03□□□□□ -0.16
RTN3-214ENST00000545432 CTSVO60911 334 aa14.03□□□□□ -0.16
RTN3-214ENST00000545432 GYPCP04921 128 aa14.03□□□□□ -0.16
RTN3-214ENST00000545432 IGFBP2P18065 325 aa14.03□□□□□ -0.16
RTN3-214ENST00000545432 CASP6P55212 293 aa14.03□□□□□ -0.16
RTN3-214ENST00000545432 OCA2Q04671 838 aa14.03□□□□□ -0.16
RTN3-214ENST00000545432 TLE4Q04727 773 aa14.03□□□□□ -0.16
RTN3-214ENST00000545432 KRTCAP3Q53RY4 240 aa14.03□□□□□ -0.16
RTN3-214ENST00000545432 DNAJC21Q5F1R6 531 aaKnown RBP14.03□□□□□ -0.16
RTN3-214ENST00000545432 TFDP3Q5H9I0 405 aa14.03□□□□□ -0.16
RTN3-214ENST00000545432 WASHC2DQ5SRD0 308 aa14.03□□□□□ -0.16
RTN3-214ENST00000545432 MICALCLQ6ZW33 695 aa14.03□□□□□ -0.16
RTN3-214ENST00000545432 SPPL2CQ8IUH8 684 aa14.03□□□□□ -0.16
RTN3-214ENST00000545432 RHOT2Q8IXI1 618 aa14.03□□□□□ -0.16
RTN3-214ENST00000545432 LMNTD1Q8N9Z9 388 aa14.03□□□□□ -0.16
RTN3-214ENST00000545432 PHF10Q8WUB8 498 aaKnown RBP14.03□□□□□ -0.16
RTN3-214ENST00000545432 ELMO1Q92556 727 aa14.03□□□□□ -0.16
RTN3-214ENST00000545432 DNAJC1Q96KC8 554 aaKnown RBP14.03□□□□□ -0.16
RTN3-214ENST00000545432 IMMP1LQ96LU5 166 aa14.03□□□□□ -0.16
RTN3-214ENST00000545432 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.03□□□□□ -0.163e-6■□□□□ 8.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms