RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 FGBP02675 491 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 EEF2P13639 858 aaKnown RBP3.92□□□□□ -1.78
SNHG1-222ENST00000545308 TIA1P31483 386 aaKnown RBP eCLIP3.92□□□□□ -1.783e-6■■■■□ 22.3
SNHG1-222ENST00000545308 MAP2K2P36507 400 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 AMTP48728 403 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 GMPSP49915 693 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-222ENST00000545308 UBASH3AP57075 661 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 RCN2Q14257 317 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 MORF4L2Q15014 288 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 KLHL22Q53GT1 634 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 AWAT2Q6E213 333 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 PRR27Q6MZM9 219 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 SLC27A1Q6PCB7 646 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 ZNF517Q6ZMY9 492 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-222ENST00000545308 DGLUCYQ7Z3D6 616 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 TMPRSS11BQ86T26 416 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 KLHL7Q8IXQ5 586 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 TIGD4Q8IY51 512 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 C1orf52Q8N6N3 182 aaKnown RBP3.92□□□□□ -1.78
SNHG1-222ENST00000545308 UXS1Q8NBZ7 420 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 DBF4BQ8NFT6 615 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 OR52I2Q8NH67 350 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 C9orf43Q8TAL5 461 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-222ENST00000545308 THAP6Q8TBB0 222 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 HEXDCQ8WVB3 486 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 DNAAF4Q8WXU2 420 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 SMPDL3BQ92485 455 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 NSMAFQ92636 917 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 PDLIM5Q96HC4 596 aaKnown RBP3.92□□□□□ -1.78
SNHG1-222ENST00000545308 NLRP4Q96MN2 994 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 CCDC43Q96MW1 224 aaKnown RBP3.92□□□□□ -1.78
SNHG1-222ENST00000545308 UTP14AQ9BVJ6 771 aaKnown RBP3.92□□□□□ -1.78
SNHG1-222ENST00000545308 ACAT2Q9BWD1 397 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 SPRTNQ9H040 489 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-222ENST00000545308 Q9N2K0 584 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 ABCB8Q9NUT2 735 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 DPP3Q9NY33 737 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 ELOVL5Q9NYP7 299 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 ERAP1Q9NZ08 941 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 CACNG4Q9UBN1 327 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 ABT1Q9ULW3 272 aaKnown RBP3.92□□□□□ -1.78
SNHG1-222ENST00000545308 INSL5Q9Y5Q6 135 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 PTGDR2Q9Y5Y4 395 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 SCN4AP35499 1836 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 C4BP0C0L5 1744 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 TNRC18O15417 2968 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-222ENST00000545308 TAF1P21675 1872 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 PTPRCP08575 1304 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 PALLDQ8WX93 1383 aa3.91□□□□□ -1.78
SNHG1-222ENST00000545308 KCPQ6ZWJ8 1503 aa3.91□□□□□ -1.78
SNHG1-222ENST00000545308 USP54Q70EL1 1684 aa3.91□□□□□ -1.78
SNHG1-222ENST00000545308 CASP8AP2Q9UKL3 1982 aa3.91□□□□□ -1.78
SNHG1-222ENST00000545308 LY6G6EA0A0G2JKS1 128 aa3.91□□□□□ -1.78
SNHG1-222ENST00000545308 LRRD1A4D1F6 860 aa3.91□□□□□ -1.78
SNHG1-222ENST00000545308 OOEPA6NGQ2 149 aa3.91□□□□□ -1.78
SNHG1-222ENST00000545308 TMEM178BH3BS89 294 aa3.91□□□□□ -1.78
SNHG1-222ENST00000545308 RTCAO00442 366 aaKnown RBP3.91□□□□□ -1.78
SNHG1-222ENST00000545308 TNFRSF13BO14836 293 aaPredicted RBP3.91□□□□□ -1.78
SNHG1-222ENST00000545308 AP5Z1O43299 807 aa3.91□□□□□ -1.78
SNHG1-222ENST00000545308 SELENOFO60613 162 aa3.91□□□□□ -1.78
SNHG1-222ENST00000545308 KERAO60938 352 aa3.91□□□□□ -1.78
SNHG1-222ENST00000545308 VIMP08670 466 aaKnown RBP3.91□□□□□ -1.78
SNHG1-222ENST00000545308 THEGLP0DJG4 465 aa3.91□□□□□ -1.78
SNHG1-222ENST00000545308 S1PR1P21453 382 aa3.91□□□□□ -1.78
SNHG1-222ENST00000545308 SP100P23497 879 aaPredicted RBP3.91□□□□□ -1.78
SNHG1-222ENST00000545308 EEF1B2P24534 225 aaKnown RBP3.91□□□□□ -1.78
SNHG1-222ENST00000545308 PSMA3P25788 255 aa3.91□□□□□ -1.78
SNHG1-222ENST00000545308 WNT5AP41221 380 aa3.91□□□□□ -1.78
SNHG1-222ENST00000545308 RFX2P48378 723 aa3.91□□□□□ -1.78
SNHG1-222ENST00000545308 CLK1P49759 484 aaKnown RBP3.91□□□□□ -1.78
SNHG1-222ENST00000545308 ASCL1P50553 236 aa3.91□□□□□ -1.78
SNHG1-222ENST00000545308 TPD52P55327 224 aaPredicted RBP3.91□□□□□ -1.78
SNHG1-222ENST00000545308 YBEYP58557 167 aaPredicted RBP3.91□□□□□ -1.78
SNHG1-222ENST00000545308 BPIFB3P59826 476 aa3.91□□□□□ -1.78
SNHG1-222ENST00000545308 BNC1Q01954 994 aa3.91□□□□□ -1.78
SNHG1-222ENST00000545308 DHX34Q14147 1143 aaKnown RBP3.91□□□□□ -1.78
SNHG1-222ENST00000545308 OASLQ15646 514 aaKnown RBP3.91□□□□□ -1.78
SNHG1-222ENST00000545308 SLC39A12Q504Y0 691 aa3.91□□□□□ -1.78
SNHG1-222ENST00000545308 SETMARQ53H47 684 aaPredicted RBP3.91□□□□□ -1.78
SNHG1-222ENST00000545308 GCNT6Q5T4J0 391 aa3.91□□□□□ -1.78
SNHG1-222ENST00000545308 GRTP1Q5TC63 336 aa3.91□□□□□ -1.78
SNHG1-222ENST00000545308 RAD9BQ6WBX8 426 aa3.91□□□□□ -1.78
SNHG1-222ENST00000545308 TMPRSS11FQ6ZWK6 438 aa3.91□□□□□ -1.78
SNHG1-222ENST00000545308 SMG6Q86US8 1419 aaKnown RBP3.91□□□□□ -1.78
SNHG1-222ENST00000545308 MAP7D3Q8IWC1 876 aa3.91□□□□□ -1.78
SNHG1-222ENST00000545308 NANOGP1Q8N7R0 232 aa3.91□□□□□ -1.78
SNHG1-222ENST00000545308 OR5M8Q8NGP6 311 aa3.91□□□□□ -1.78
SNHG1-222ENST00000545308 SPATA22Q8NHS9 363 aa3.91□□□□□ -1.78
SNHG1-222ENST00000545308 SLC38A5Q8WUX1 472 aa3.91□□□□□ -1.78
SNHG1-222ENST00000545308 DNASE1L2Q92874 299 aa3.91□□□□□ -1.78
SNHG1-222ENST00000545308 MIB2Q96AX9 1013 aa3.91□□□□□ -1.78
SNHG1-222ENST00000545308 HES6Q96HZ4 224 aa3.91□□□□□ -1.78
SNHG1-222ENST00000545308 COG3Q96JB2 828 aa3.91□□□□□ -1.78
SNHG1-222ENST00000545308 AK8Q96MA6 479 aa3.91□□□□□ -1.78
SNHG1-222ENST00000545308 SPATA33Q96N06 139 aa3.91□□□□□ -1.78
SNHG1-222ENST00000545308 SFXN2Q96NB2 322 aa3.91□□□□□ -1.78
SNHG1-222ENST00000545308 QRFPRQ96P65 431 aa3.91□□□□□ -1.78
SNHG1-222ENST00000545308 ATP6V0BQ99437 205 aa3.91□□□□□ -1.78
SNHG1-222ENST00000545308 SLC25A33Q9BSK2 321 aa3.91□□□□□ -1.78
SNHG1-222ENST00000545308 PI4K2AQ9BTU6 479 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms