RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 SLC2A7Q6PXP3 512 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 CANT1Q8WVQ1 401 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 SMPDL3BQ92485 455 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 PAAF1Q9BRP4 392 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 CALML5Q9NZT1 146 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 PDE10AQ9Y233 779 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 AKAP12Q02952 1782 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 FAM208AQ9UK61 1670 aaKnown RBP12.52□□□□□ -0.41
CHD4-211ENST00000544484 KDELR3O43731 214 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 TPRG1Q6ZUI0 275 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 LRRTM4Q86VH4 590 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 TMEM130Q8N3G9 435 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 LRRC58Q96CX6 371 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 COL21A1Q96P44 957 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 TBC1D17Q9HA65 648 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 PDLIM1O00151 329 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 RLN1P04808 185 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 BLKP51451 505 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 GALK1P51570 392 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 C22orf39Q6P5X5 142 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 CDH24Q86UP0 819 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 TRIM74Q86UV6 250 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 OR10Q1Q8NGQ4 319 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 GPR22Q99680 433 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 NSUN3Q9H649 340 aaKnown RBP12.52□□□□□ -0.41
CHD4-211ENST00000544484 COPS7AQ9UBW8 275 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 CDH7Q9ULB5 785 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 PLAGL1Q9UM63 463 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 HEBP2Q9Y5Z4 205 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 IRAK3Q9Y616 596 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 UPK3BL1B0FP48 263 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 UPK3BL2E5RIL1 263 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 E7ENX8 843 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 CLIC1O00299 241 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 PRPS1L1P21108 318 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 ACTR3P61158 418 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 SCARB2Q14108 478 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 ATCAYQ86WG3 371 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 NUDT13Q86X67 352 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 PHTF2Q8N3S3 785 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 POF1BQ8WVV4 589 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 DIRAS2Q96HU8 199 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 SIGLEC10Q96LC7 697 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 DPYSL5Q9BPU6 564 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 GPATCH1Q9BRR8 931 aaKnown RBP12.52□□□□□ -0.41
CHD4-211ENST00000544484 SLC35A5Q9BS91 424 aa12.52□□□□□ -0.41
CHD4-211ENST00000544484 LEFTY2O00292 366 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 NDUFS4O43181 175 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 GALTP07902 379 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 ENGP17813 658 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 PTCHD3Q3KNS1 767 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 MBOAT1Q6ZNC8 495 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 MCEMP1Q8IX19 187 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 LRRC17Q8N6Y2 441 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 CXorf21Q9HAI6 301 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 USP29Q9HBJ7 922 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 CFIP05156 583 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 KHKP50053 298 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 UFM1P61960 85 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 NFATC2Q13469 925 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 UPP1Q16831 310 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 TRIM63Q969Q1 353 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 RNF31Q96EP0 1072 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 GAL3ST1Q99999 423 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 EFCAB11Q9BUY7 163 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 TRIM39Q9HCM9 518 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 ITM2CQ9NQX7 267 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 TMEM248Q9NWD8 314 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 FZD4Q9ULV1 537 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 DCLK1O15075 740 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 MPIP34949 423 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 KLHL24Q6TFL4 600 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 FRMD7Q6ZUT3 714 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 USP30Q70CQ3 517 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 THOC6Q86W42 341 aaKnown RBP12.51□□□□□ -0.41
CHD4-211ENST00000544484 CILP2Q8IUL8 1156 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 SVOPLQ8N434 492 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 OR10H4Q8NGA5 316 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 OR4C6Q8NH72 309 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 TRIB2Q92519 343 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 TFGQ92734 400 aaPredicted RBP12.51□□□□□ -0.41
CHD4-211ENST00000544484 BORCS6Q96GS4 357 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 IFT27Q9BW83 186 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 TAPBPLQ9BX59 468 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 GPR62Q9BZJ7 368 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 SPEF2Q9C093 1822 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 CPED1A4D0V7 1026 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 PLK4O00444 970 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 CHST10O43529 356 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 PRAMEF11O60813 436 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 PREPP48147 710 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 SERINC3Q13530 473 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 GPR68Q15743 365 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 SUSD1Q6UWL2 747 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 KCTD8Q6ZWB6 473 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 GOLGA7Q7Z5G4 137 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 DEFB119Q8N690 84 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 COCHO43405 550 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 FMO3P31513 532 aa12.51□□□□□ -0.41
CHD4-211ENST00000544484 CRISP3P54108 245 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms