RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 PRKAB1Q9Y478 270 aa12.83□□□□□ -0.36
TNC-212ENST00000542877 NFS1Q9Y697 457 aa12.83□□□□□ -0.36
TNC-212ENST00000542877 CCL16O15467 120 aa12.83□□□□□ -0.36
TNC-212ENST00000542877 GATBO75879 557 aaKnown RBP12.83□□□□□ -0.36
TNC-212ENST00000542877 NPPAP01160 153 aa12.83□□□□□ -0.36
TNC-212ENST00000542877 KCNA5P22460 613 aa12.83□□□□□ -0.36
TNC-212ENST00000542877 AP1S2P56377 157 aa12.83□□□□□ -0.36
TNC-212ENST00000542877 CAP1Q01518 475 aa12.83□□□□□ -0.36
TNC-212ENST00000542877 TPRG1LQ5T0D9 272 aa12.83□□□□□ -0.36
TNC-212ENST00000542877 PTPN18Q99952 460 aa12.83□□□□□ -0.36
TNC-212ENST00000542877 PLEKHA1Q9HB21 404 aa12.83□□□□□ -0.36
TNC-212ENST00000542877 AMBNQ9NP70 447 aa12.83□□□□□ -0.36
TNC-212ENST00000542877 PIGVQ9NUD9 493 aa12.83□□□□□ -0.36
TNC-212ENST00000542877 EIF3KQ9UBQ5 218 aaKnown RBP12.83□□□□□ -0.36
TNC-212ENST00000542877 C3P01024 1663 aa12.83□□□□□ -0.36
TNC-212ENST00000542877 CHRM5P08912 532 aaPredicted RBP12.83□□□□□ -0.36
TNC-212ENST00000542877 DSTNP60981 165 aa12.83□□□□□ -0.36
TNC-212ENST00000542877 HMGCS1Q01581 520 aa12.83□□□□□ -0.36
TNC-212ENST00000542877 WSCD2Q2TBF2 565 aa12.83□□□□□ -0.36
TNC-212ENST00000542877 ARL14EPQ8N8R7 260 aaPredicted RBP12.83□□□□□ -0.36
TNC-212ENST00000542877 ACDQ96AP0 544 aa12.83□□□□□ -0.36
TNC-212ENST00000542877 AURKBQ96GD4 344 aaPredicted RBP12.83□□□□□ -0.36
TNC-212ENST00000542877 MAPKAP1Q9BPZ7 522 aa12.83□□□□□ -0.36
TNC-212ENST00000542877 ITM2CQ9NQX7 267 aa12.83□□□□□ -0.36
TNC-212ENST00000542877 HAS3O00219 553 aa12.83□□□□□ -0.36
TNC-212ENST00000542877 PLOD2O00469 737 aa12.83□□□□□ -0.36
TNC-212ENST00000542877 AKAP8O43823 692 aaKnown RBP12.83□□□□□ -0.36
TNC-212ENST00000542877 FAM189A1O60320 539 aa12.83□□□□□ -0.36
TNC-212ENST00000542877 CPN2P22792 545 aa12.83□□□□□ -0.36
TNC-212ENST00000542877 GNALP38405 381 aa12.83□□□□□ -0.36
TNC-212ENST00000542877 GBX2P52951 348 aaPredicted RBP12.83□□□□□ -0.36
TNC-212ENST00000542877 CSTF1Q05048 431 aaKnown RBP12.83□□□□□ -0.36
TNC-212ENST00000542877 ILF3Q12906 894 aaKnown RBP eCLIP12.83□□□□□ -0.36
TNC-212ENST00000542877 PAFAH1B3Q15102 231 aaKnown RBP12.83□□□□□ -0.36
TNC-212ENST00000542877 NUDT13Q86X67 352 aa12.83□□□□□ -0.36
TNC-212ENST00000542877 OR8H3Q8N146 312 aa12.83□□□□□ -0.36
TNC-212ENST00000542877 PHTF2Q8N3S3 785 aa12.83□□□□□ -0.36
TNC-212ENST00000542877 KLHL6Q8WZ60 621 aa12.83□□□□□ -0.36
TNC-212ENST00000542877 ZNF641Q96N77 438 aaPredicted RBP12.83□□□□□ -0.36
TNC-212ENST00000542877 KCNC2Q96PR1 638 aa12.83□□□□□ -0.36
TNC-212ENST00000542877 SLC35A5Q9BS91 424 aa12.83□□□□□ -0.36
TNC-212ENST00000542877 LGR4Q9BXB1 951 aa12.83□□□□□ -0.36
TNC-212ENST00000542877 C14orf105Q9NVL8 296 aa12.83□□□□□ -0.36
TNC-212ENST00000542877 RIMKLBQ9ULI2 386 aa12.83□□□□□ -0.36
TNC-212ENST00000542877 HEBP2Q9Y5Z4 205 aa12.83□□□□□ -0.36
TNC-212ENST00000542877 B3GALT2O43825 422 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 USP2O75604 605 aaPredicted RBP12.82□□□□□ -0.36
TNC-212ENST00000542877 ITIH1P19827 911 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 FPR1P21462 350 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 PLA2G16P53816 162 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 NRLP54845 237 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 MAZP56270 477 aaKnown RBP12.82□□□□□ -0.36
TNC-212ENST00000542877 ARPC4P59998 168 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 TSPAN5P62079 268 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 DUOXA1Q1HG43 343 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 MSS51Q4VC12 460 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 SIRPB2Q5JXA9 342 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 CAND1Q86VP6 1230 aaKnown RBP12.82□□□□□ -0.36
TNC-212ENST00000542877 FAM129CQ86XR2 697 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 DNAJA4Q8WW22 397 aaPredicted RBP12.82□□□□□ -0.36
TNC-212ENST00000542877 FKBP14Q9NWM8 211 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 METTL21EPA6NDL7 271 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 TMEM233B4DJY2 109 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 BTBD19C9JJ37 291 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 APOC1P02654 83 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 TCEAL1Q15170 157 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 SCAMP5Q8TAC9 235 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 BCO2Q9BYV7 579 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 MARCH7Q9H992 704 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 TMLHEQ9NVH6 421 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 RBMXL2O75526 392 aaKnown RBP12.82□□□□□ -0.36
TNC-212ENST00000542877 YES1P07947 543 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 CD72P21854 359 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 ACVR2AP27037 513 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 MPIP34949 423 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 RABGGTBP53611 331 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 C1QTNF8P60827 252 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 EIF5AP63241 154 aaKnown RBP12.82□□□□□ -0.36
TNC-212ENST00000542877 PHC1P78364 1004 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 TXNL4AP83876 142 aaKnown RBP12.82□□□□□ -0.36
TNC-212ENST00000542877 ZNF33AQ06730 810 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 ZNF829Q3KNS6 432 aaPredicted RBP12.82□□□□□ -0.36
TNC-212ENST00000542877 FRG2Q64ET8 278 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 OR14C36Q8NHC7 312 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 CCDC115Q96NT0 180 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 FRG2BQ96QU4 278 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 LPIN3Q9BQK8 851 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 SLC39A3Q9BRY0 314 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 P2RX2Q9UBL9 471 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 SLIT2O94813 1529 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 NCBP2P52298 156 aaKnown RBP eCLIP12.82□□□□□ -0.36
TNC-212ENST00000542877 PCLAFQ15004 111 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 TIGD5Q53EQ6 642 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 C15orf40Q8WUR7 153 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 ZUFSPQ96AP4 578 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 PYURFQ96I23 114 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 MND1Q9BWT6 205 aa12.82□□□□□ -0.36
TNC-212ENST00000542877 ZNF395Q9H8N7 513 aaPredicted RBP12.82□□□□□ -0.36
TNC-212ENST00000542877 ZCCHC3Q9NUD5 404 aaKnown RBP12.82□□□□□ -0.36
TNC-212ENST00000542877 MGAT4AQ9UM21 535 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms