RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 STK40Q8N2I9 435 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 KRTCAP2Q8N6L1 136 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 GPR26Q8NDV2 337 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 ABHD11Q8NFV4 315 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 OR2AP1Q8NGE2 309 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 RDH12Q96NR8 316 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 RBM4BQ9BQ04 359 aaKnown RBP12.22□□□□□ -0.45
RNF4-222ENST00000541204 TCF25Q9BQ70 676 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 RBM4Q9BWF3 364 aaKnown RBP12.22□□□□□ -0.45
RNF4-222ENST00000541204 CCDC90BQ9GZT6 254 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 LATS2Q9NRM7 1088 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 PAK1IP1Q9NWT1 392 aaPredicted RBP12.22□□□□□ -0.45
RNF4-222ENST00000541204 LOC100130705A0A1B0GUX0 176 aa12.21□□□□□ -0.45
RNF4-222ENST00000541204 ELOVL7A1L3X0 281 aa12.21□□□□□ -0.45
RNF4-222ENST00000541204 CXCR6O00574 342 aa12.21□□□□□ -0.45
RNF4-222ENST00000541204 OTCP00480 354 aa12.21□□□□□ -0.45
RNF4-222ENST00000541204 UGT2B4P06133 528 aa12.21□□□□□ -0.45
RNF4-222ENST00000541204 SRCP12931 536 aa12.21□□□□□ -0.45
RNF4-222ENST00000541204 CD9P21926 228 aa12.21□□□□□ -0.45
RNF4-222ENST00000541204 PSMA3P25788 255 aa12.21□□□□□ -0.45
RNF4-222ENST00000541204 SERPINA4P29622 427 aa12.21□□□□□ -0.45
RNF4-222ENST00000541204 IDUAP35475 653 aa12.21□□□□□ -0.45
RNF4-222ENST00000541204 ERVFC1P60507 584 aa12.21□□□□□ -0.45
RNF4-222ENST00000541204 CYP2A13Q16696 494 aa12.21□□□□□ -0.45
RNF4-222ENST00000541204 SGO1Q5FBB7 561 aa12.21□□□□□ -0.45
RNF4-222ENST00000541204 LRRC66Q68CR7 880 aa12.21□□□□□ -0.45
RNF4-222ENST00000541204 ASTLQ6HA08 431 aaPredicted RBP12.21□□□□□ -0.45
RNF4-222ENST00000541204 TMCO5AQ8N6Q1 288 aa12.21□□□□□ -0.45
RNF4-222ENST00000541204 PJA1Q8NG27 643 aa12.21□□□□□ -0.45
RNF4-222ENST00000541204 OR10Q1Q8NGQ4 319 aa12.21□□□□□ -0.45
RNF4-222ENST00000541204 SKA2Q8WVK7 121 aaPredicted RBP12.21□□□□□ -0.45
RNF4-222ENST00000541204 NCLNQ969V3 563 aa12.21□□□□□ -0.45
RNF4-222ENST00000541204 ZBTB18Q99592 522 aa12.21□□□□□ -0.45
RNF4-222ENST00000541204 ASAH2Q9NR71 780 aa12.21□□□□□ -0.45
RNF4-222ENST00000541204 TRNAU1APQ9NX07 287 aaKnown RBP12.21□□□□□ -0.45
RNF4-222ENST00000541204 ELOVL2Q9NXB9 296 aa12.21□□□□□ -0.45
RNF4-222ENST00000541204 FAM8A1Q9UBU6 413 aa12.21□□□□□ -0.45
RNF4-222ENST00000541204 INVSQ9Y283 1065 aa12.21□□□□□ -0.45
RNF4-222ENST00000541204 TNPO3Q9Y5L0 923 aaKnown RBP12.21□□□□□ -0.45
RNF4-222ENST00000541204 MYOFQ9NZM1 2061 aa12.21□□□□□ -0.45
RNF4-222ENST00000541204 E2F6O75461 281 aa12.21□□□□□ -0.46
RNF4-222ENST00000541204 TIMP1P01033 207 aa12.21□□□□□ -0.46
RNF4-222ENST00000541204 S100BP04271 92 aaPredicted RBP12.21□□□□□ -0.46
RNF4-222ENST00000541204 CTSAP10619 480 aa12.21□□□□□ -0.46
RNF4-222ENST00000541204 AKT1P31749 480 aa12.21□□□□□ -0.46
RNF4-222ENST00000541204 PPM1AP35813 382 aa12.21□□□□□ -0.46
RNF4-222ENST00000541204 POM121L1PQ3SYA9 428 aa12.21□□□□□ -0.46
RNF4-222ENST00000541204 ZNF697Q5TEC3 545 aa12.21□□□□□ -0.46
RNF4-222ENST00000541204 GCNT7Q6ZNI0 430 aa12.21□□□□□ -0.46
RNF4-222ENST00000541204 SNX20Q7Z614 316 aa12.21□□□□□ -0.46
RNF4-222ENST00000541204 RBFAQ8N0V3 343 aa12.21□□□□□ -0.46
RNF4-222ENST00000541204 ELMOD1Q8N336 334 aa12.21□□□□□ -0.46
RNF4-222ENST00000541204 LIX1Q8N485 282 aa12.21□□□□□ -0.46
RNF4-222ENST00000541204 ST13P5Q8NFI4 369 aaPredicted RBP12.21□□□□□ -0.46
RNF4-222ENST00000541204 CLHC1Q8NHS4 586 aa12.21□□□□□ -0.46
RNF4-222ENST00000541204 FIBINQ8TAL6 211 aa12.21□□□□□ -0.46
RNF4-222ENST00000541204 SORCS1Q8WY21 1168 aa12.21□□□□□ -0.46
RNF4-222ENST00000541204 MUL1Q969V5 352 aa12.21□□□□□ -0.46
RNF4-222ENST00000541204 ITCHQ96J02 903 aa12.21□□□□□ -0.46
RNF4-222ENST00000541204 PPP3R2Q96LZ3 170 aa12.21□□□□□ -0.46
RNF4-222ENST00000541204 LINC00597Q9H2U6 94 aa12.21□□□□□ -0.46
RNF4-222ENST00000541204 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.21□□□□□ -0.46
RNF4-222ENST00000541204 SLC6A13Q9NSD5 602 aa12.21□□□□□ -0.46
RNF4-222ENST00000541204 SNX5Q9Y5X3 404 aa12.21□□□□□ -0.46
RNF4-222ENST00000541204 SLC1A7O00341 560 aa12.2□□□□□ -0.46
RNF4-222ENST00000541204 TAPBPO15533 448 aa12.2□□□□□ -0.46
RNF4-222ENST00000541204 MTX2O75431 263 aa12.2□□□□□ -0.46
RNF4-222ENST00000541204 SERPINB7O75635 380 aa12.2□□□□□ -0.46
RNF4-222ENST00000541204 PGRP06401 933 aa12.2□□□□□ -0.46
RNF4-222ENST00000541204 ACRV1P26436 265 aa12.2□□□□□ -0.46
RNF4-222ENST00000541204 GP2P55259 537 aaKnown RBP12.2□□□□□ -0.46
RNF4-222ENST00000541204 ISL1P61371 349 aa12.2□□□□□ -0.46
RNF4-222ENST00000541204 SLC7A9P82251 487 aa12.2□□□□□ -0.46
RNF4-222ENST00000541204 EPS8Q12929 822 aa12.2□□□□□ -0.46
RNF4-222ENST00000541204 CRTC1Q6UUV9 634 aa12.2□□□□□ -0.46
RNF4-222ENST00000541204 Q6ZVU0 165 aa12.2□□□□□ -0.46
RNF4-222ENST00000541204 ADAMTSL2Q86TH1 951 aa12.2□□□□□ -0.46
RNF4-222ENST00000541204 C10orf111Q8N326 155 aa12.2□□□□□ -0.46
RNF4-222ENST00000541204 SVOPLQ8N434 492 aa12.2□□□□□ -0.46
RNF4-222ENST00000541204 CNIH3Q8TBE1 160 aa12.2□□□□□ -0.46
RNF4-222ENST00000541204 RHBDF1Q96CC6 855 aa12.2□□□□□ -0.46
RNF4-222ENST00000541204 NODALQ96S42 347 aa12.2□□□□□ -0.46
RNF4-222ENST00000541204 NEURL2Q9BR09 285 aa12.2□□□□□ -0.46
RNF4-222ENST00000541204 DPY30Q9C005 99 aa12.2□□□□□ -0.46
RNF4-222ENST00000541204 BLOC1S6Q9UL45 172 aa12.2□□□□□ -0.46
RNF4-222ENST00000541204 EIF3LQ9Y262 564 aaKnown RBP12.2□□□□□ -0.46
RNF4-222ENST00000541204 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.2□□□□□ -0.46
RNF4-222ENST00000541204 KRT87PA6NCN2 255 aa12.2□□□□□ -0.46
RNF4-222ENST00000541204 RGS14O43566 566 aa12.2□□□□□ -0.46
RNF4-222ENST00000541204 XPNPEP2O43895 674 aa12.2□□□□□ -0.46
RNF4-222ENST00000541204 PFKLP17858 780 aa12.2□□□□□ -0.46
RNF4-222ENST00000541204 FSHRP23945 695 aa12.2□□□□□ -0.46
RNF4-222ENST00000541204 DCTP40126 519 aa12.2□□□□□ -0.46
RNF4-222ENST00000541204 RAD23AP54725 363 aa12.2□□□□□ -0.46
RNF4-222ENST00000541204 GABARAPL2P60520 117 aa12.2□□□□□ -0.46
RNF4-222ENST00000541204 NTHL1P78549 312 aa12.2□□□□□ -0.46
RNF4-222ENST00000541204 PON2Q15165 354 aa12.2□□□□□ -0.46
RNF4-222ENST00000541204 TEAD2Q15562 447 aa12.2□□□□□ -0.46
RNF4-222ENST00000541204 NIPAL1Q6NVV3 410 aa12.2□□□□□ -0.46
RNF4-222ENST00000541204 CERS6Q6ZMG9 384 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms