RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 GLMNQ92990 594 aa11.99□□□□□ -0.49
NPC1-202ENST00000540608 PLD4Q96BZ4 506 aa11.99□□□□□ -0.49
NPC1-202ENST00000540608 MTFMTQ96DP5 389 aaKnown RBP11.99□□□□□ -0.49
NPC1-202ENST00000540608 BARD1Q99728 777 aaKnown RBP11.99□□□□□ -0.49
NPC1-202ENST00000540608 PSD2Q9BQI7 771 aa11.99□□□□□ -0.49
NPC1-202ENST00000540608 INPP5KQ9BT40 448 aa11.99□□□□□ -0.49
NPC1-202ENST00000540608 ATP13A3Q9H7F0 1226 aa11.99□□□□□ -0.49
NPC1-202ENST00000540608 SAMD4AQ9UPU9 718 aaKnown RBP11.99□□□□□ -0.49
NPC1-202ENST00000540608 CA12O43570 354 aa11.99□□□□□ -0.49
NPC1-202ENST00000540608 CLDN9O95484 217 aa11.99□□□□□ -0.49
NPC1-202ENST00000540608 KRT6AP02538 564 aa11.99□□□□□ -0.49
NPC1-202ENST00000540608 KRT6BP04259 564 aa11.99□□□□□ -0.49
NPC1-202ENST00000540608 GSNP06396 782 aa11.99□□□□□ -0.49
NPC1-202ENST00000540608 CORO1AP31146 461 aaKnown RBP11.99□□□□□ -0.49
NPC1-202ENST00000540608 GRK3P35626 688 aa11.99□□□□□ -0.49
NPC1-202ENST00000540608 KRT6CP48668 564 aa11.99□□□□□ -0.49
NPC1-202ENST00000540608 DAPP51397 102 aa11.99□□□□□ -0.49
NPC1-202ENST00000540608 SIM2Q14190 667 aaPredicted RBP11.99□□□□□ -0.49
NPC1-202ENST00000540608 INO80DQ53TQ3 878 aaPredicted RBP11.99□□□□□ -0.49
NPC1-202ENST00000540608 KDM4DQ6B0I6 523 aa11.99□□□□□ -0.49
NPC1-202ENST00000540608 OR2T5Q6IEZ7 315 aa11.99□□□□□ -0.49
NPC1-202ENST00000540608 SNX20Q7Z614 316 aa11.99□□□□□ -0.49
NPC1-202ENST00000540608 P2RY8Q86VZ1 359 aa11.99□□□□□ -0.49
NPC1-202ENST00000540608 OR6Q1Q8NGQ2 317 aa11.99□□□□□ -0.49
NPC1-202ENST00000540608 OR2T29Q8NH02 315 aa11.99□□□□□ -0.49
NPC1-202ENST00000540608 C2orf15Q8WU43 125 aaKnown RBP11.99□□□□□ -0.49
NPC1-202ENST00000540608 ZNF300Q96RE9 604 aaPredicted RBP11.99□□□□□ -0.49
NPC1-202ENST00000540608 ACPTQ9BZG2 426 aa11.99□□□□□ -0.49
NPC1-202ENST00000540608 RIBC2Q9H4K1 309 aa11.99□□□□□ -0.49
NPC1-202ENST00000540608 ASB8Q9H765 288 aa11.99□□□□□ -0.49
NPC1-202ENST00000540608 PARVBQ9HBI1 364 aa11.99□□□□□ -0.49
NPC1-202ENST00000540608 TM9SF3Q9HD45 589 aa11.99□□□□□ -0.49
NPC1-202ENST00000540608 IL1RAPQ9NPH3 570 aa11.99□□□□□ -0.49
NPC1-202ENST00000540608 TRIM17Q9Y577 477 aa11.99□□□□□ -0.49
NPC1-202ENST00000540608 PLXNA4Q9HCM2 1894 aa11.98□□□□□ -0.49
NPC1-202ENST00000540608 COCHO43405 550 aa11.98□□□□□ -0.49
NPC1-202ENST00000540608 MRPS14O60783 128 aaKnown RBP11.98□□□□□ -0.49
NPC1-202ENST00000540608 STK16O75716 305 aa11.98□□□□□ -0.49
NPC1-202ENST00000540608 STC2O76061 302 aa11.98□□□□□ -0.49
NPC1-202ENST00000540608 ALPIP09923 528 aa11.98□□□□□ -0.49
NPC1-202ENST00000540608 PRPS2P11908 318 aa11.98□□□□□ -0.49
NPC1-202ENST00000540608 CLCA4Q14CN2 919 aa11.98□□□□□ -0.49
NPC1-202ENST00000540608 INAQ16352 499 aa11.98□□□□□ -0.49
NPC1-202ENST00000540608 PAGE2BQ5JRK9 111 aa11.98□□□□□ -0.49
NPC1-202ENST00000540608 ADGRF1Q5T601 910 aa11.98□□□□□ -0.49
NPC1-202ENST00000540608 LAIR1Q6GTX8 287 aa11.98□□□□□ -0.49
NPC1-202ENST00000540608 NEK10Q6ZWH5 1172 aa11.98□□□□□ -0.49
NPC1-202ENST00000540608 CEP68Q76N32 757 aa11.98□□□□□ -0.49
NPC1-202ENST00000540608 TAS1R1Q7RTX1 841 aa11.98□□□□□ -0.49
NPC1-202ENST00000540608 TMEM173Q86WV6 379 aaPredicted RBP11.98□□□□□ -0.49
NPC1-202ENST00000540608 DYNC2LI1Q8TCX1 351 aa11.98□□□□□ -0.49
NPC1-202ENST00000540608 PHF10Q8WUB8 498 aaKnown RBP11.98□□□□□ -0.49
NPC1-202ENST00000540608 PIH1D2Q8WWB5 315 aa11.98□□□□□ -0.49
NPC1-202ENST00000540608 APOL4Q9BPW4 351 aa11.98□□□□□ -0.49
NPC1-202ENST00000540608 DLGAP4Q9Y2H0 992 aa11.98□□□□□ -0.49
NPC1-202ENST00000540608 PMF1-BGLAPU3KQ54 211 aa11.98□□□□□ -0.49
NPC1-202ENST00000540608 THSD7BQ9C0I4 1608 aa11.98□□□□□ -0.49
NPC1-202ENST00000540608 TRIM43BA6NCK2 446 aa11.98□□□□□ -0.49
NPC1-202ENST00000540608 ZNF840PA6NDX5 716 aa11.98□□□□□ -0.49
NPC1-202ENST00000540608 TGM1P22735 817 aa11.98□□□□□ -0.49
NPC1-202ENST00000540608 SLC11A1P49279 550 aa11.98□□□□□ -0.49
NPC1-202ENST00000540608 EIF2B2P49770 351 aaKnown RBP11.98□□□□□ -0.49
NPC1-202ENST00000540608 ST13P50502 369 aaKnown RBP11.98□□□□□ -0.49
NPC1-202ENST00000540608 VBP1P61758 197 aa11.98□□□□□ -0.49
NPC1-202ENST00000540608 NFATC2Q13469 925 aa11.98□□□□□ -0.49
NPC1-202ENST00000540608 HIST2H2ACQ16777 129 aaPredicted RBP11.98□□□□□ -0.49
NPC1-202ENST00000540608 TTLL9Q3SXZ7 439 aa11.98□□□□□ -0.49
NPC1-202ENST00000540608 HECTD3Q5T447 861 aa11.98□□□□□ -0.49
NPC1-202ENST00000540608 ARMC12Q5T9G4 340 aa11.98□□□□□ -0.49
NPC1-202ENST00000540608 LYPLAL1Q5VWZ2 237 aa11.98□□□□□ -0.49
NPC1-202ENST00000540608 ZNF783Q6ZMS7 281 aa11.98□□□□□ -0.49
NPC1-202ENST00000540608 MACC1Q6ZN28 852 aa11.98□□□□□ -0.49
NPC1-202ENST00000540608 ADCK1Q86TW2 530 aa11.98□□□□□ -0.49
NPC1-202ENST00000540608 FAM9CQ8IZT9 166 aa11.98□□□□□ -0.49
NPC1-202ENST00000540608 BEND7Q8N7W2 519 aaPredicted RBP11.98□□□□□ -0.49
NPC1-202ENST00000540608 GKN1Q9NS71 199 aa11.98□□□□□ -0.49
NPC1-202ENST00000540608 TMEM161AQ9NX61 479 aa11.98□□□□□ -0.49
NPC1-202ENST00000540608 GMPPBQ9Y5P6 360 aa11.98□□□□□ -0.49
NPC1-202ENST00000540608 PGLSO95336 258 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 PDYNP01213 254 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 BMP4P12644 408 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 CYP4B1P13584 511 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 ACRV1P26436 265 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 DNAJA1P31689 397 aaKnown RBP11.97□□□□□ -0.49
NPC1-202ENST00000540608 CDKN2CP42773 168 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 MASP1P48740 699 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 HNRNPFP52597 415 aaKnown RBP11.97□□□□□ -0.49
NPC1-202ENST00000540608 RHOAP61586 193 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 LSM3P62310 102 aaKnown RBP11.97□□□□□ -0.49
NPC1-202ENST00000540608 MVKQ03426 396 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 AGAP7PQ5VUJ5 663 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 FUT10Q6P4F1 479 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 DOK6Q6PKX4 331 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 PRSS55Q6UWB4 352 aaPredicted RBP11.97□□□□□ -0.49
NPC1-202ENST00000540608 ZNF551Q7Z340 670 aaPredicted RBP11.97□□□□□ -0.49
NPC1-202ENST00000540608 SERPINA11Q86U17 422 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 ANKRD46Q86W74 232 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 PGBD3Q8N328 593 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 SVOPQ8N4V2 548 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 TESCQ96BS2 214 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms