RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 DHCR24Q15392 516 aa12.31□□□□□ -0.44
DDX55-206ENST00000539934 RUNDC3AQ59EK9 446 aa12.31□□□□□ -0.44
DDX55-206ENST00000539934 MANEAQ5SRI9 462 aa12.31□□□□□ -0.44
DDX55-206ENST00000539934 ULK2Q8IYT8 1036 aa12.31□□□□□ -0.44
DDX55-206ENST00000539934 ABI1Q8IZP0 508 aa12.31□□□□□ -0.44
DDX55-206ENST00000539934 ZCCHC9Q8N567 271 aaKnown RBP12.31□□□□□ -0.44
DDX55-206ENST00000539934 PCDH20Q8N6Y1 951 aaKnown RBP12.31□□□□□ -0.44
DDX55-206ENST00000539934 PQLC3Q8N755 202 aa12.31□□□□□ -0.44
DDX55-206ENST00000539934 FAM71DQ8N9W8 422 aa12.31□□□□□ -0.44
DDX55-206ENST00000539934 KDM1BQ8NB78 822 aa12.31□□□□□ -0.44
DDX55-206ENST00000539934 OR10T2Q8NGX3 314 aa12.31□□□□□ -0.44
DDX55-206ENST00000539934 PCDH19Q8TAB3 1148 aa12.31□□□□□ -0.44
DDX55-206ENST00000539934 CEP76Q8TAP6 659 aa12.31□□□□□ -0.44
DDX55-206ENST00000539934 FAM216AQ8WUB2 273 aa12.31□□□□□ -0.44
DDX55-206ENST00000539934 GTF2H4Q92759 462 aa12.31□□□□□ -0.44
DDX55-206ENST00000539934 MAGED4Q96JG8 741 aa12.31□□□□□ -0.44
DDX55-206ENST00000539934 ASB16Q96NS5 453 aa12.31□□□□□ -0.44
DDX55-206ENST00000539934 RBM15Q96T37 977 aaKnown RBP eCLIP12.31□□□□□ -0.44
DDX55-206ENST00000539934 GPR62Q9BZJ7 368 aa12.31□□□□□ -0.44
DDX55-206ENST00000539934 S1PR5Q9H228 398 aa12.31□□□□□ -0.44
DDX55-206ENST00000539934 PIGUQ9H490 435 aa12.31□□□□□ -0.44
DDX55-206ENST00000539934 HMG20AQ9NP66 347 aa12.31□□□□□ -0.44
DDX55-206ENST00000539934 TMEM30AQ9NV96 361 aa12.31□□□□□ -0.44
DDX55-206ENST00000539934 TBC1D13Q9NVG8 400 aa12.31□□□□□ -0.44
DDX55-206ENST00000539934 GLS2Q9UI32 602 aa12.31□□□□□ -0.44
DDX55-206ENST00000539934 PPIL1Q9Y3C6 166 aa12.31□□□□□ -0.44
DDX55-206ENST00000539934 ACACBO00763 2458 aa12.31□□□□□ -0.44
DDX55-206ENST00000539934 ZNF638Q14966 1978 aaKnown RBP12.3□□□□□ -0.44
DDX55-206ENST00000539934 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.3□□□□□ -0.44
DDX55-206ENST00000539934 FAM92AA1XBS5 289 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 YJEFN3A6XGL0 299 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 A8MUA0 341 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 C2CD4DB7Z1M9 353 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 NRP1O14786 923 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 HSPA4LO95757 839 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 TYMPP19971 482 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 ARL4AP40617 200 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 ZNF91Q05481 1191 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 SLC3A1Q07837 685 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 ZNF177Q13360 481 aaPredicted RBP12.3□□□□□ -0.44
DDX55-206ENST00000539934 KYNUQ16719 465 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 RAB41Q5JT25 222 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 ZBTB37Q5TC79 503 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 SYPL2Q5VXT5 272 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 BHLHB9Q6PI77 547 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 PDZD4Q76G19 769 aaPredicted RBP12.3□□□□□ -0.44
DDX55-206ENST00000539934 ERMP1Q7Z2K6 904 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 GALNTL5Q7Z4T8 443 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 LACC1Q8IV20 430 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 TSPAN14Q8NG11 270 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 PDCD6IPQ8WUM4 868 aaKnown RBP12.3□□□□□ -0.44
DDX55-206ENST00000539934 METTL21AQ8WXB1 218 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 JADE3Q92613 823 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 ELP4Q96EB1 424 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 PGAP3Q96FM1 320 aaPredicted RBP12.3□□□□□ -0.44
DDX55-206ENST00000539934 KCTD15Q96SI1 283 aaPredicted RBP12.3□□□□□ -0.44
DDX55-206ENST00000539934 TMEM209Q96SK2 561 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 NPY6RQ99463 290 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 DCUN1D5Q9BTE7 237 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 RACGAP1Q9H0H5 632 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 OR51M1Q9H341 326 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 POMKQ9H5K3 350 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 RPF2Q9H7B2 306 aaKnown RBP12.3□□□□□ -0.44
DDX55-206ENST00000539934 CSNK1G1Q9HCP0 422 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 TMLHEQ9NVH6 421 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 TMEM161AQ9NX61 479 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 GDE1Q9NZC3 331 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 COQ3Q9NZJ6 369 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 PCDHB8Q9UN66 801 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 PLCL2Q9UPR0 1127 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 NAALADL1Q9UQQ1 740 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 PRG3Q9Y2Y8 225 aaPredicted RBP12.3□□□□□ -0.44
DDX55-206ENST00000539934 MED19A0JLT2 244 aaPredicted RBP12.3□□□□□ -0.44
DDX55-206ENST00000539934 DCLK1O15075 740 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 SLC31A2O15432 143 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 GYG2O15488 501 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 B4GALT3O60512 393 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 CBX6O95503 412 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 RAB3DO95716 219 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 TTC4O95801 387 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 FCER2P06734 321 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 MBL2P11226 248 aaPredicted RBP12.3□□□□□ -0.44
DDX55-206ENST00000539934 RPL22P35268 128 aaKnown RBP12.3□□□□□ -0.44
DDX55-206ENST00000539934 PPM1AP35813 382 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 PITX1P78337 314 aaPredicted RBP12.3□□□□□ -0.44
DDX55-206ENST00000539934 PPARDQ03181 441 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 GRM7Q14831 915 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 PTPRRQ15256 657 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 DUSP6Q16828 381 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 PGS1Q32NB8 556 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 ZFP69Q49AA0 526 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 KDELC2Q7Z4H8 507 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 KIF18BQ86Y91 864 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 NAGSQ8N159 534 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 PDIK1LQ8N165 341 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 C12orf76Q8N812 135 aaPredicted RBP12.3□□□□□ -0.44
DDX55-206ENST00000539934 SLC7A14Q8TBB6 771 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 HTR3CQ8WXA8 447 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 TCEAL3Q969E4 200 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 FAF2Q96CS3 445 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms