RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 SHISA9B4DS77 424 aa3.92□□□□□ -1.78
CCDC7-209ENST00000539197 ZWINTO95229 277 aa3.92□□□□□ -1.78
CCDC7-209ENST00000539197 JAK1P23458 1154 aa3.92□□□□□ -1.78
CCDC7-209ENST00000539197 OXTRP30559 389 aa3.92□□□□□ -1.78
CCDC7-209ENST00000539197 MAPK4P31152 587 aa3.92□□□□□ -1.78
CCDC7-209ENST00000539197 CLCN4P51793 760 aa3.92□□□□□ -1.78
CCDC7-209ENST00000539197 XGP55808 180 aa3.92□□□□□ -1.78
CCDC7-209ENST00000539197 TMF1P82094 1093 aa3.92□□□□□ -1.78
CCDC7-209ENST00000539197 FCHO2Q0JRZ9 810 aa3.92□□□□□ -1.78
CCDC7-209ENST00000539197 G3BP1Q13283 466 aaKnown RBP eCLIP3.92□□□□□ -1.78
CCDC7-209ENST00000539197 ODF4Q2M2E3 257 aa3.92□□□□□ -1.78
CCDC7-209ENST00000539197 ELFN2Q5R3F8 820 aa3.92□□□□□ -1.78
CCDC7-209ENST00000539197 FAM198BQ6UWH4 519 aa3.92□□□□□ -1.78
CCDC7-209ENST00000539197 SMC5Q8IY18 1101 aa3.92□□□□□ -1.78
CCDC7-209ENST00000539197 TYMSOSQ8TAI1 123 aa3.92□□□□□ -1.78
CCDC7-209ENST00000539197 CNRIP1Q96F85 164 aaPredicted RBP3.92□□□□□ -1.78
CCDC7-209ENST00000539197 RAD9AQ99638 391 aa3.92□□□□□ -1.78
CCDC7-209ENST00000539197 TUBB1Q9H4B7 451 aa3.92□□□□□ -1.78
CCDC7-209ENST00000539197 TBC1D17Q9HA65 648 aa3.92□□□□□ -1.78
CCDC7-209ENST00000539197 ZNF107Q9UII5 783 aaPredicted RBP3.92□□□□□ -1.78
CCDC7-209ENST00000539197 WIPI2Q9Y4P8 454 aa3.92□□□□□ -1.78
CCDC7-209ENST00000539197 LNP1A1A4G5 178 aa3.91□□□□□ -1.78
CCDC7-209ENST00000539197 C2orf81A6NN90 581 aa3.91□□□□□ -1.78
CCDC7-209ENST00000539197 TRUB2O95900 331 aaKnown RBP3.91□□□□□ -1.78
CCDC7-209ENST00000539197 TBX18O95935 607 aa3.91□□□□□ -1.78
CCDC7-209ENST00000539197 LAMP2P13473 410 aa3.91□□□□□ -1.78
CCDC7-209ENST00000539197 PTPN3P26045 913 aa3.91□□□□□ -1.78
CCDC7-209ENST00000539197 CDK3Q00526 305 aa3.91□□□□□ -1.78
CCDC7-209ENST00000539197 EIPR1Q53HC9 387 aa3.91□□□□□ -1.78
CCDC7-209ENST00000539197 SNX30Q5VWJ9 437 aa3.91□□□□□ -1.78
CCDC7-209ENST00000539197 CEACAM19Q7Z692 300 aa3.91□□□□□ -1.78
CCDC7-209ENST00000539197 ZFAND4Q86XD8 727 aa3.91□□□□□ -1.78
CCDC7-209ENST00000539197 SUMF1Q8NBK3 374 aa3.91□□□□□ -1.78
CCDC7-209ENST00000539197 PSMB7Q99436 277 aa3.91□□□□□ -1.78
CCDC7-209ENST00000539197 GPN1Q9HCN4 374 aaPredicted RBP3.91□□□□□ -1.78
CCDC7-209ENST00000539197 SERINC1Q9NRX5 453 aa3.91□□□□□ -1.78
CCDC7-209ENST00000539197 FAM207AQ9NSI2 230 aaPredicted RBP3.91□□□□□ -1.78
CCDC7-209ENST00000539197 A0A087WUV0 522 aaPredicted RBP3.9□□□□□ -1.79
CCDC7-209ENST00000539197 LRRC72A6NJI9 287 aa3.9□□□□□ -1.79
CCDC7-209ENST00000539197 MITFO75030 526 aaPredicted RBP3.9□□□□□ -1.79
CCDC7-209ENST00000539197 MED24O75448 989 aa3.9□□□□□ -1.79
CCDC7-209ENST00000539197 POP4O95707 220 aaKnown RBP3.9□□□□□ -1.79
CCDC7-209ENST00000539197 ZNF74Q16587 644 aa3.9□□□□□ -1.79
CCDC7-209ENST00000539197 TMCO3Q6UWJ1 677 aa3.9□□□□□ -1.79
CCDC7-209ENST00000539197 VITQ6UXI7 678 aa3.9□□□□□ -1.79
CCDC7-209ENST00000539197 LDB1Q86U70 411 aaPredicted RBP3.9□□□□□ -1.79
CCDC7-209ENST00000539197 IL17REQ8NFR9 667 aa3.9□□□□□ -1.79
CCDC7-209ENST00000539197 FAM218AQ96MZ4 157 aa3.9□□□□□ -1.79
CCDC7-209ENST00000539197 C7orf26Q96N11 449 aa3.9□□□□□ -1.79
CCDC7-209ENST00000539197 SPAG5Q96R06 1193 aa3.9□□□□□ -1.79
CCDC7-209ENST00000539197 FTOQ9C0B1 505 aaKnown RBP eCLIP3.9□□□□□ -1.79
CCDC7-209ENST00000539197 HRH4Q9H3N8 390 aa3.9□□□□□ -1.79
CCDC7-209ENST00000539197 THAP10Q9P2Z0 257 aaPredicted RBP3.9□□□□□ -1.79
CCDC7-209ENST00000539197 ORC3Q9UBD5 711 aaPredicted RBP3.9□□□□□ -1.79
CCDC7-209ENST00000539197 C19orf25Q9UFG5 118 aaPredicted RBP3.9□□□□□ -1.79
CCDC7-209ENST00000539197 STUB1Q9UNE7 303 aa3.9□□□□□ -1.79
CCDC7-209ENST00000539197 NME7Q9Y5B8 376 aa3.9□□□□□ -1.79
CCDC7-209ENST00000539197 STYXL1Q9Y6J8 313 aa3.9□□□□□ -1.79
CCDC7-209ENST00000539197 FEZF1A0PJY2 475 aa3.89□□□□□ -1.79
CCDC7-209ENST00000539197 H0YAE9 185 aa3.89□□□□□ -1.79
CCDC7-209ENST00000539197 HPP00738 406 aa3.89□□□□□ -1.79
CCDC7-209ENST00000539197 VPREB1P12018 145 aa3.89□□□□□ -1.79
CCDC7-209ENST00000539197 MNDAP41218 407 aa3.89□□□□□ -1.79
CCDC7-209ENST00000539197 LMOD3Q0VAK6 560 aa3.89□□□□□ -1.79
CCDC7-209ENST00000539197 CDHR3Q6ZTQ4 885 aa3.89□□□□□ -1.79
CCDC7-209ENST00000539197 ADCK1Q86TW2 530 aa3.89□□□□□ -1.79
CCDC7-209ENST00000539197 NUDT13Q86X67 352 aa3.89□□□□□ -1.79
CCDC7-209ENST00000539197 EXOC8Q8IYI6 725 aa3.89□□□□□ -1.79
CCDC7-209ENST00000539197 FBXO39Q8N4B4 442 aa3.89□□□□□ -1.79
CCDC7-209ENST00000539197 KLHL30-AS1Q8NEE0 82 aa3.89□□□□□ -1.79
CCDC7-209ENST00000539197 LRRC59Q96AG4 307 aaKnown RBP3.89□□□□□ -1.79
CCDC7-209ENST00000539197 CNOT6LQ96LI5 555 aaKnown RBP3.89□□□□□ -1.79
CCDC7-209ENST00000539197 KIFC3Q9BVG8 833 aa3.89□□□□□ -1.79
CCDC7-209ENST00000539197 KCNK15Q9H427 330 aa3.89□□□□□ -1.79
CCDC7-209ENST00000539197 MYH16Q9H6N6 1097 aa3.89□□□□□ -1.79
CCDC7-209ENST00000539197 IRAK4Q9NWZ3 460 aa3.89□□□□□ -1.79
CCDC7-209ENST00000539197 PLAGL1Q9UM63 463 aa3.89□□□□□ -1.79
CCDC7-209ENST00000539197 GTF2A1LQ9UNN4 478 aa3.89□□□□□ -1.79
CCDC7-209ENST00000539197 ATRXP46100 2492 aa3.88□□□□□ -1.79
CCDC7-209ENST00000539197 CDRT15L2A8MXV6 281 aa3.88□□□□□ -1.79
CCDC7-209ENST00000539197 FPGTO14772 594 aa3.88□□□□□ -1.79
CCDC7-209ENST00000539197 PHF1O43189 567 aaPredicted RBP3.88□□□□□ -1.79
CCDC7-209ENST00000539197 PRAMEF11O60813 436 aa3.88□□□□□ -1.79
CCDC7-209ENST00000539197 SMIM18P0DKX4 95 aa3.88□□□□□ -1.79
CCDC7-209ENST00000539197 PDHA2P29803 388 aa3.88□□□□□ -1.79
CCDC7-209ENST00000539197 CSTF2P33240 577 aaKnown RBP eCLIP3.88□□□□□ -1.79
CCDC7-209ENST00000539197 GARSP41250 739 aaKnown RBP3.88□□□□□ -1.79
CCDC7-209ENST00000539197 SLC35D3Q5M8T2 416 aa3.88□□□□□ -1.79
CCDC7-209ENST00000539197 UGT3A1Q6NUS8 523 aa3.88□□□□□ -1.79
CCDC7-209ENST00000539197 RAPH1Q70E73 1250 aa3.88□□□□□ -1.79
CCDC7-209ENST00000539197 CHMP1BQ7LBR1 199 aa3.88□□□□□ -1.79
CCDC7-209ENST00000539197 TIPARPQ7Z3E1 657 aaKnown RBP3.88□□□□□ -1.79
CCDC7-209ENST00000539197 HAUS6Q7Z4H7 955 aa3.88□□□□□ -1.79
CCDC7-209ENST00000539197 FAM131BQ86XD5 332 aa3.88□□□□□ -1.79
CCDC7-209ENST00000539197 ZBED8Q8IZ13 594 aa3.88□□□□□ -1.79
CCDC7-209ENST00000539197 USP6NLQ92738 828 aa3.88□□□□□ -1.79
CCDC7-209ENST00000539197 NEK1Q96PY6 1258 aa3.88□□□□□ -1.79
CCDC7-209ENST00000539197 OLFM1Q99784 485 aa3.88□□□□□ -1.79
CCDC7-209ENST00000539197 SLC26A6Q9BXS9 759 aa3.88□□□□□ -1.79
CCDC7-209ENST00000539197 HOXD1Q9GZZ0 328 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms