RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	HAUS5	O94927	633 aa		11.85	□□□□□ -0.51
CLTCL1-205	ENST00000538828	ONECUT2	O95948	504 aa		11.85	□□□□□ -0.51
CLTCL1-205	ENST00000538828	PTPN4	P29074	926 aa		11.85	□□□□□ -0.51
CLTCL1-205	ENST00000538828	ELK3	P41970	407 aa		11.85	□□□□□ -0.51
CLTCL1-205	ENST00000538828	GCGR	P47871	477 aa		11.85	□□□□□ -0.51
CLTCL1-205	ENST00000538828	ARSF	P54793	590 aa		11.85	□□□□□ -0.51
CLTCL1-205	ENST00000538828	C19orf57	Q0VDD7	668 aa		11.85	□□□□□ -0.51
CLTCL1-205	ENST00000538828	CALCOCO2	Q13137	446 aa		11.85	□□□□□ -0.51
CLTCL1-205	ENST00000538828	SP140	Q13342	867 aa		11.85	□□□□□ -0.51
CLTCL1-205	ENST00000538828	ZIC1	Q15915	447 aa		11.85	□□□□□ -0.51
CLTCL1-205	ENST00000538828	TBR1	Q16650	682 aa		11.85	□□□□□ -0.51
CLTCL1-205	ENST00000538828	ACSBG2	Q5FVE4	666 aa		11.85	□□□□□ -0.51
CLTCL1-205	ENST00000538828	TCTE1	Q5JU00	501 aa		11.85	□□□□□ -0.51
CLTCL1-205	ENST00000538828	TEDDM1	Q5T9Z0	273 aa		11.85	□□□□□ -0.51
CLTCL1-205	ENST00000538828	ZNF385C	Q66K41	422 aa	Predicted RBP	11.85	□□□□□ -0.51
CLTCL1-205	ENST00000538828	DUPD1	Q68J44	220 aa		11.85	□□□□□ -0.51
CLTCL1-205	ENST00000538828	FBXO38	Q6PIJ6	1188 aa		11.85	□□□□□ -0.51
CLTCL1-205	ENST00000538828	CNST	Q6PJW8	725 aa		11.85	□□□□□ -0.51
CLTCL1-205	ENST00000538828	CYHR1	Q6ZMK1	362 aa		11.85	□□□□□ -0.51
CLTCL1-205	ENST00000538828	SKA2	Q8WVK7	121 aa	Predicted RBP	11.85	□□□□□ -0.51
CLTCL1-205	ENST00000538828	THAP4	Q8WY91	577 aa		11.85	□□□□□ -0.51
CLTCL1-205	ENST00000538828	SMPDL3A	Q92484	453 aa		11.85	□□□□□ -0.51
CLTCL1-205	ENST00000538828	ANKRD7	Q92527	254 aa		11.85	□□□□□ -0.51
CLTCL1-205	ENST00000538828	N4BP2L2	Q92802	583 aa	Predicted RBP	11.85	□□□□□ -0.51
CLTCL1-205	ENST00000538828	ELMO2	Q96JJ3	720 aa		11.85	□□□□□ -0.51
CLTCL1-205	ENST00000538828	KRT12	Q99456	494 aa		11.85	□□□□□ -0.51
CLTCL1-205	ENST00000538828	NLN	Q9BYT8	704 aa		11.85	□□□□□ -0.51
CLTCL1-205	ENST00000538828	ACTR5	Q9H9F9	607 aa	Predicted RBP	11.85	□□□□□ -0.51
CLTCL1-205	ENST00000538828	PLAC1	Q9HBJ0	212 aa		11.85	□□□□□ -0.51
CLTCL1-205	ENST00000538828	FAM60A	Q9NP50	221 aa		11.85	□□□□□ -0.51
CLTCL1-205	ENST00000538828	IARS2	Q9NSE4	1012 aa	Known RBP	11.85	□□□□□ -0.51
CLTCL1-205	ENST00000538828	UTP6	Q9NYH9	597 aa	Known RBP	11.85	□□□□□ -0.51
CLTCL1-205	ENST00000538828	MOCS1	Q9NZB8	636 aa		11.85	□□□□□ -0.51
CLTCL1-205	ENST00000538828	IL1RAPL1	Q9NZN1	696 aa		11.85	□□□□□ -0.51
CLTCL1-205	ENST00000538828	IL17B	Q9UHF5	180 aa		11.85	□□□□□ -0.51
CLTCL1-205	ENST00000538828	FARSA	Q9Y285	508 aa	Known RBP	11.85	□□□□□ -0.51
CLTCL1-205	ENST00000538828	ARHGEF33	A8MVX0	844 aa		11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	OR2B3	O76000	313 aa		11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	CCNDBP1	O95273	360 aa		11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	AHSG	P02765	367 aa		11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	NTRK1	P04629	796 aa		11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	C8G	P07360	202 aa		11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	GSTA2	P09210	222 aa		11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	ERVK-10	P10266	1014 aa		11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	PVR	P15151	417 aa		11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	AGXT	P21549	392 aa		11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	F8A1	P23610	371 aa		11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	HRH2	P25021	359 aa		11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	GABRB3	P28472	473 aa		11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	CCR10	P46092	362 aa		11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	RPL21	P46778	160 aa	Known RBP	11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	EMP3	P54852	163 aa		11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	ABAT	P80404	500 aa		11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	CKAP4	Q07065	602 aa	Known RBP	11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	GPS2	Q13227	327 aa		11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	SF1	Q15637	639 aa	Known RBP	11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	KCTD19	Q17RG1	926 aa	Predicted RBP	11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	FIGLA	Q6QHK4	219 aa		11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	SLC26A11	Q86WA9	606 aa		11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	IGDCC3	Q8IVU1	814 aa		11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	APLF	Q8IW19	511 aa	Predicted RBP	11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	OR2L3	Q8NG85	312 aa		11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	OR2A1	Q8NGT9	310 aa		11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	GIMAP7	Q8NHV1	300 aa		11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	CT55	Q8WUE5	264 aa		11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	APOBEC4	Q8WW27	367 aa	Known RBP	11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	DLG3	Q92796	817 aa		11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	NACC2	Q96BF6	587 aa		11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	PDLIM5	Q96HC4	596 aa	Known RBP	11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	GPR21	Q99679	349 aa		11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	NRTN	Q99748	197 aa		11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	ARHGAP9	Q9BRR9	750 aa		11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	TRIM51	Q9BSJ1	452 aa		11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	RAB17	Q9H0T7	212 aa		11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	PCMTD2	Q9NV79	361 aa		11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	WDR70	Q9NW82	654 aa		11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	EURL	Q9NYK6	297 aa		11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	GALP	Q9UBC7	116 aa		11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	TRMT6	Q9UJA5	497 aa	Known RBP	11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	PLAGL1	Q9UM63	463 aa		11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	POLH	Q9Y253	713 aa		11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	UTP11	Q9Y3A2	253 aa	Known RBP	11.84	□□□□□ -0.51
CLTCL1-205	ENST00000538828	ZNF462	Q96JM2	2506 aa		11.83	□□□□□ -0.52
CLTCL1-205	ENST00000538828		A0A1W2PPV9	198 aa		11.83	□□□□□ -0.52
CLTCL1-205	ENST00000538828	OR2A25	A4D2G3	310 aa		11.83	□□□□□ -0.52
CLTCL1-205	ENST00000538828	FITM1	A5D6W6	292 aa		11.83	□□□□□ -0.52
CLTCL1-205	ENST00000538828	KIF2A	O00139	706 aa	Predicted RBP	11.83	□□□□□ -0.52
CLTCL1-205	ENST00000538828	NKX2-8	O15522	239 aa		11.83	□□□□□ -0.52
CLTCL1-205	ENST00000538828	ZSCAN9	O15535	394 aa	Predicted RBP	11.83	□□□□□ -0.52
CLTCL1-205	ENST00000538828	ZNF749	O43361	778 aa		11.83	□□□□□ -0.52
CLTCL1-205	ENST00000538828	MAG	P20916	626 aa		11.83	□□□□□ -0.52
CLTCL1-205	ENST00000538828	CMPK1	P30085	196 aa		11.83	□□□□□ -0.52
CLTCL1-205	ENST00000538828	GRIA3	P42263	894 aa		11.83	□□□□□ -0.52
CLTCL1-205	ENST00000538828	MPP1	Q00013	466 aa		11.83	□□□□□ -0.52
CLTCL1-205	ENST00000538828	TIAL1	Q01085	375 aa	Known RBP eCLIP	11.83	□□□□□ -0.52
CLTCL1-205	ENST00000538828	PRDX1	Q06830	199 aa	Known RBP	11.83	□□□□□ -0.52
CLTCL1-205	ENST00000538828	MGAT5	Q09328	741 aa		11.83	□□□□□ -0.52
CLTCL1-205	ENST00000538828	UGT8	Q16880	541 aa		11.83	□□□□□ -0.52
CLTCL1-205	ENST00000538828	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	11.83	□□□□□ -0.52
CLTCL1-205	ENST00000538828	FAM45BP	Q6NSW5	357 aa		11.83	□□□□□ -0.52

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