RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 PSME2Q9UL46 239 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 VPS4AQ9UN37 437 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 DOLKQ9UPQ8 538 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 A0A1W2PQ67 120 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 WDR47O94967 919 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 KRT6AP02538 564 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 KRT6BP04259 564 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 LHCGRP22888 699 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 FMO3P31513 532 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 KRT6CP48668 564 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 CYP4F8P98187 520 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 NOGQ13253 232 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 GTF2H3Q13889 308 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 RETSATQ6NUM9 610 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 SLC16A12Q6ZSM3 486 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 BTLAQ7Z6A9 289 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 ADHFE1Q8IWW8 467 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 ZCCHC7Q8N3Z6 543 aaKnown RBP11.65□□□□□ -0.54
CPNE8-203ENST00000538596 SVOPLQ8N434 492 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 ARL10Q8N8L6 244 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 OR5K1Q8NHB7 308 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 LZICQ8WZA0 190 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 SH3GL1Q99961 368 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 ATG10Q9H0Y0 220 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 SLC32A1Q9H598 525 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 USE1Q9NZ43 259 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 INTS6Q9UL03 887 aaKnown RBP11.65□□□□□ -0.54
CPNE8-203ENST00000538596 ERVK-11Q9UQG0 969 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 SLC22A14Q9Y267 594 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 BACE2Q9Y5Z0 518 aa11.65□□□□□ -0.54
CPNE8-203ENST00000538596 hCG_2039718K7EN88 272 aa11.65□□□□□ -0.55
CPNE8-203ENST00000538596 BCAS1O75363 584 aaPredicted RBP11.65□□□□□ -0.55
CPNE8-203ENST00000538596 SH3BGRLO75368 114 aa11.65□□□□□ -0.55
CPNE8-203ENST00000538596 EFEMP2O95967 443 aa11.65□□□□□ -0.55
CPNE8-203ENST00000538596 RETP07949 1114 aa11.65□□□□□ -0.55
CPNE8-203ENST00000538596 GP2P55259 537 aaKnown RBP11.65□□□□□ -0.55
CPNE8-203ENST00000538596 CLDN8P56748 225 aa11.65□□□□□ -0.55
CPNE8-203ENST00000538596 IL5RAQ01344 420 aa11.65□□□□□ -0.55
CPNE8-203ENST00000538596 MOGQ16653 247 aa11.65□□□□□ -0.55
CPNE8-203ENST00000538596 PTCHD3Q3KNS1 767 aa11.65□□□□□ -0.55
CPNE8-203ENST00000538596 ZNF691Q5VV52 312 aa11.65□□□□□ -0.55
CPNE8-203ENST00000538596 ATG9BQ674R7 924 aa11.65□□□□□ -0.55
CPNE8-203ENST00000538596 LAIR1Q6GTX8 287 aa11.65□□□□□ -0.55
CPNE8-203ENST00000538596 CRTC3Q6UUV7 619 aa11.65□□□□□ -0.55
CPNE8-203ENST00000538596 SERPINA13PQ6UXR4 307 aa11.65□□□□□ -0.55
CPNE8-203ENST00000538596 ZNF554Q86TJ5 538 aa11.65□□□□□ -0.55
CPNE8-203ENST00000538596 BBS7Q8IWZ6 715 aa11.65□□□□□ -0.55
CPNE8-203ENST00000538596 RAB2BQ8WUD1 216 aa11.65□□□□□ -0.55
CPNE8-203ENST00000538596 NRBF2Q96F24 287 aa11.65□□□□□ -0.55
CPNE8-203ENST00000538596 ASIC4Q96FT7 647 aa11.65□□□□□ -0.55
CPNE8-203ENST00000538596 PYURFQ96I23 114 aa11.65□□□□□ -0.55
CPNE8-203ENST00000538596 CNDP2Q96KP4 475 aaKnown RBP11.65□□□□□ -0.55
CPNE8-203ENST00000538596 KCNH6Q9H252 994 aa11.65□□□□□ -0.55
CPNE8-203ENST00000538596 SRRDQ9UH36 339 aa11.65□□□□□ -0.55
CPNE8-203ENST00000538596 BAG5Q9UL15 447 aa11.65□□□□□ -0.55
CPNE8-203ENST00000538596 C5orf42Q9H799 3197 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 MYO1GB0I1T2 1018 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 FAM220BPB1ANY3 271 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 GFRA2O00451 464 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 GJA1P17302 382 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 EPHA2P29317 976 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 PTSQ03393 145 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 BOP1Q14137 746 aaKnown RBP11.64□□□□□ -0.55
CPNE8-203ENST00000538596 LRIF1Q5T3J3 769 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 Q6ZNB5 142 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 VTCN1Q7Z7D3 282 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 ZDHHC21Q8IVQ6 265 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 OR7A2PQ8NGA2 310 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 CDC26Q8NHZ8 85 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 RAET1EQ8TD07 263 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 MYLIPQ8WY64 445 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 RDH12Q96NR8 316 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 DPH2Q9BQC3 489 aaPredicted RBP11.64□□□□□ -0.55
CPNE8-203ENST00000538596 BBS2Q9BXC9 721 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 SMG9Q9H0W8 520 aaKnown RBP11.64□□□□□ -0.55
CPNE8-203ENST00000538596 RIBC2Q9H4K1 309 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 ATP13A3Q9H7F0 1226 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 RDH14Q9HBH5 336 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 C3orf18Q9UK00 162 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 DOCK6Q96HP0 2047 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 A0A096LPI6 279 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 RFXANKO14593 260 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 TOR1BO14657 336 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 BCKDKO14874 412 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 PQBP1O60828 265 aaKnown RBP11.64□□□□□ -0.55
CPNE8-203ENST00000538596 ERN1O75460 977 aaKnown RBP11.64□□□□□ -0.55
CPNE8-203ENST00000538596 HOXB9P17482 250 aaPredicted RBP11.64□□□□□ -0.55
CPNE8-203ENST00000538596 PCMT1P22061 227 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 ALDH4A1P30038 563 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 NSG1P42857 185 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 MAP2K4P45985 399 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 CCR3P51677 355 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 LSM3P62310 102 aaKnown RBP11.64□□□□□ -0.55
CPNE8-203ENST00000538596 CDK5R2Q13319 367 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 VEPH1Q14D04 833 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 TTLL9Q3SXZ7 439 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 SPOUT1Q5T280 376 aaKnown RBP11.64□□□□□ -0.55
CPNE8-203ENST00000538596 CPZQ66K79 652 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 GRAMD4Q6IC98 578 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 TMEM132CQ8N3T6 1108 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms