RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 ZNF678Q5SXM1 525 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 ANKRD34AQ69YU3 496 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 PAMR1Q6UXH9 720 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 GDPGP1Q6ZNW5 385 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 ZNF367Q7RTV3 350 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 NLRP8Q86W28 1048 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 STX19Q8N4C7 294 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 C1orf52Q8N6N3 182 aaKnown RBP7.94□□□□□ -1.14
CSDE1-214ENST00000530886 ZNF675Q8TD23 568 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 TMEM74Q96NL1 305 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 C12orf57Q99622 126 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 RHNO1Q9BSD3 238 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 HTATIP2Q9BUP3 242 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 OR51E2Q9H255 320 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 ACTR8Q9H981 624 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 GPRC5BQ9NZH0 403 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 ASB4Q9Y574 426 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 SLC12A8A0AV02 714 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 FAM234BA2RU67 622 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 KPNA5O15131 536 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 PMPCBO75439 489 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 SCELO95171 688 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 NRIP1P48552 1158 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 CENPAP49450 140 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 CLCN3P51790 818 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 DUSP6Q16828 381 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 PKDCCQ504Y2 493 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 LRFN4Q6PJG9 635 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 DLEU7Q6UYE1 221 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 BNIPLQ7Z465 357 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 CYP4Z1Q86W10 505 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 PGBD3Q8N328 593 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 CLRN3Q8NCR9 226 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 C7orf57Q8NEG2 295 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 OR52K1Q8NGK4 314 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 GPR152Q8TDT2 470 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 CHTF18Q8WVB6 975 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 ZDHHC15Q96MV8 337 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 COL21A1Q96P44 957 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 DPYSL5Q9BPU6 564 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 IER2Q9BTL4 223 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 PPIL3Q9H2H8 161 aaKnown RBP7.94□□□□□ -1.14
CSDE1-214ENST00000530886 EMC7Q9NPA0 242 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 ABCB8Q9NUT2 735 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 RBFOX1Q9NWB1 397 aaKnown RBP7.94□□□□□ -1.14
CSDE1-214ENST00000530886 FIS1Q9Y3D6 152 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 FAM95CA0A1B0GW59 222 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 hCG_1807616A0A1W2PRN6 198 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 KLRG2A4D1S0 409 aaPredicted RBP7.94□□□□□ -1.14
CSDE1-214ENST00000530886 GATCO43716 136 aaKnown RBP7.94□□□□□ -1.14
CSDE1-214ENST00000530886 TNNC2P02585 160 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 TP53P04637 393 aaPredicted RBP7.94□□□□□ -1.14
CSDE1-214ENST00000530886 CYBBP04839 570 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 HOXC6P09630 235 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 HLA-EP13747 358 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 KCNA5P22460 613 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 TNFSF9P41273 254 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 PTGER2P43116 358 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 KCNQ1P51787 676 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 JAK3P52333 1124 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 ARPP19P56211 112 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 ZNF91Q05481 1191 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 MRPL28Q13084 256 aaKnown RBP7.94□□□□□ -1.14
CSDE1-214ENST00000530886 OLIG2Q13516 323 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 GRB7Q14451 532 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 MXD4Q14582 209 aaPredicted RBP7.94□□□□□ -1.14
CSDE1-214ENST00000530886 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.94□□□□□ -1.142e-9■■□□□ 11.8
CSDE1-214ENST00000530886 FAM26DQ5JW98 314 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 PLET1Q6UQ28 207 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 TRILQ7L0X0 811 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 RNF180Q86T96 592 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 ATCAYQ86WG3 371 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 TRIM48Q8IWZ4 208 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 ABI1Q8IZP0 508 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 RDM1Q8NG50 284 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 GPR151Q8TDV0 419 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 FUBP1Q96AE4 644 aaKnown RBP7.94□□□□□ -1.14
CSDE1-214ENST00000530886 TUBGCP3Q96CW5 907 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 CSPG4P5Q96PW8 444 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 CAMKK2Q96RR4 588 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 COPS4Q9BT78 406 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 TRIM8Q9BZR9 551 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 TNKS2Q9H2K2 1166 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 GBA2Q9HCG7 927 aaPredicted RBP7.94□□□□□ -1.14
CSDE1-214ENST00000530886 ING4Q9UNL4 249 aa7.94□□□□□ -1.14
CSDE1-214ENST00000530886 A0A0A6YYJ9 748 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 SLC30A4O14863 429 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 KCNQ2O43526 872 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 SH3BP5O60239 455 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 PFKLP17858 780 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 SFNP31947 248 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 HSPA2P54652 639 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 BTG1P62324 171 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 STXBP2Q15833 593 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 HSD17B12Q53GQ0 312 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 XKR9Q5GH70 373 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 KIAA1614Q5VZ46 1190 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 CPZQ66K79 652 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 CLEC6AQ6EIG7 209 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 ANKRD54Q6NXT1 300 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms