RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 SUDS3Q9H7L9 328 aaPredicted RBP8.61□□□□□ -1.03
CCDC90B-217ENST00000530253 ERVMER34-1Q9H9K5 563 aa8.61□□□□□ -1.03
CCDC90B-217ENST00000530253 UGT1A7Q9HAW7 530 aa8.61□□□□□ -1.03
CCDC90B-217ENST00000530253 UGT1A10Q9HAW8 530 aa8.61□□□□□ -1.03
CCDC90B-217ENST00000530253 UGT1A8Q9HAW9 530 aa8.61□□□□□ -1.03
CCDC90B-217ENST00000530253 IL21RQ9HBE5 538 aa8.61□□□□□ -1.03
CCDC90B-217ENST00000530253 EPB41L5Q9HCM4 733 aa8.61□□□□□ -1.03
CCDC90B-217ENST00000530253 DLL3Q9NYJ7 618 aa8.61□□□□□ -1.03
CCDC90B-217ENST00000530253 APPL1Q9UKG1 709 aa8.61□□□□□ -1.03
CCDC90B-217ENST00000530253 SLC17A4Q9Y2C5 497 aa8.61□□□□□ -1.03
CCDC90B-217ENST00000530253 PCYT1BQ9Y5K3 369 aaPredicted RBP8.61□□□□□ -1.03
CCDC90B-217ENST00000530253 TP53BP1Q12888 1972 aaPredicted RBP8.61□□□□□ -1.03
CCDC90B-217ENST00000530253 PI4KAP42356 2102 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 PLXNB3Q9ULL4 1909 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 ZZEF1O43149 2961 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 IGLV3-16A0A075B6K0 115 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 A0A1B0GTQ1 180 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 CACNB4O00305 520 aaPredicted RBP8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 CDX4O14627 284 aaPredicted RBP8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 SGTAO43765 313 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 USP1O94782 785 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 SLU7O95391 586 aaKnown RBP8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 GOT2P00505 430 aaKnown RBP8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 CSF2P04141 144 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 PGAM1P18669 254 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 ELK3P41970 407 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 RXRGP48443 463 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 POLD2P49005 469 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 CARSP49589 748 aaKnown RBP8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 CDKN1CP49918 316 aaPredicted RBP8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 PLTPP55058 493 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 ARL4CP56559 192 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 C21orf59P57076 290 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 B4GALNT1Q00973 533 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 GUCY1A3Q02108 690 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 ITGA9Q13797 1035 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 SEMA3AQ14563 771 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 CRYMQ14894 314 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 ANKRD20A4Q4UJ75 823 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 DNAJC21Q5F1R6 531 aaKnown RBP8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 PRAMEF14Q5SWL7 426 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 GPRC6AQ5T6X5 926 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 FNDC7Q5VTL7 733 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 KANK2Q63ZY3 851 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 AFTPHQ6ULP2 937 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 KANSL1Q7Z3B3 1105 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 DGLUCYQ7Z3D6 616 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 SNX20Q7Z614 316 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 ADGRG6Q86SQ4 1221 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 PHYKPLQ8IUZ5 450 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 GPR135Q8IZ08 494 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 PDIK1LQ8N165 341 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 NXPE1Q8N323 547 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 PNPLA1Q8N8W4 532 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 OR56A4Q8NGH8 313 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 ZNF398Q8TD17 642 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 ZG16BQ96DA0 208 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 LRRC39Q96DD0 335 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 STAMBPL1Q96FJ0 436 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 HIC2Q96JB3 615 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 WDR92Q96MX6 357 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 ELF4Q99607 663 aaPredicted RBP8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 EBNA1BP2Q99848 306 aaKnown RBP8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 NUSAP1Q9BXS6 441 aaKnown RBP8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 FAM129AQ9BZQ8 928 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 TCEAL2Q9H3H9 227 aaPredicted RBP8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 ASB8Q9H765 288 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 ARFGAP3Q9NP61 516 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 RRAGDQ9NQL2 400 aaPredicted RBP8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 PHPT1Q9NRX4 125 aaPredicted RBP8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 FAM114A2Q9NRY5 505 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 VPS18Q9P253 973 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 MARCH4Q9P2E8 410 aaPredicted RBP8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 CHMP2BQ9UQN3 213 aa8.6□□□□□ -1.03
CCDC90B-217ENST00000530253 TPRP12270 2363 aaKnown RBP8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 MAGEB16A2A368 324 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 ZNF561-AS1K7EIQ3 104 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 CHUKO15111 745 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 EIF3HO15372 352 aaKnown RBP eCLIP8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 MAGEC1O60732 1142 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 DNAJC6O75061 913 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 MTX2O75431 263 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 C1QAP02745 245 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 IVLP07476 585 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 RHOXF2BP0C7M4 288 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 GIMD1P0DJR0 217 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 ITGALP20701 1170 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 KELP23276 732 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 EPHA8P29322 1005 aaPredicted RBP8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 THOP1P52888 689 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 CD83Q01151 205 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 HGFACQ04756 655 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 CACNG1Q06432 222 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 PDIA2Q13087 525 aaKnown RBP8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 PTK2BQ14289 1009 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 FRG1Q14331 258 aaKnown RBP8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 SMAD1Q15797 465 aaKnown RBP8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 HLA-BQ31612 363 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 GPR33Q49SQ1 333 aa8.59□□□□□ -1.03
CCDC90B-217ENST00000530253 AASDHQ4L235 1098 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms