RNA–Protein interactions for RNA: ENST00000528999.5

PUF60-213, Transcript of poly(U) binding splicing factor 60, human

TSL 3

Gene PUF60, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUF60-213	ENST00000528999	RPS9	P46781	194 aa	Known RBP	10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	ALDH3B2	P48448	385 aa		10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	NRIP1	P48552	1158 aa		10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	PFN3	P60673	137 aa		10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	HMGCS1	Q01581	520 aa		10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	IRF8	Q02556	426 aa		10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	DPT	Q07507	201 aa		10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	TMEM115	Q12893	351 aa	Predicted RBP	10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	BIRC2	Q13490	618 aa		10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	SLC5A9	Q2M3M2	681 aa		10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	PLA2G4E	Q3MJ16	856 aa		10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	GRHL2	Q6ISB3	625 aa		10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	IYD	Q6PHW0	289 aa		10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	LIPI	Q6XZB0	460 aa		10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	GPR149	Q86SP6	731 aa		10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	PATL1	Q86TB9	770 aa	Known RBP	10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	RALGPS2	Q86X27	583 aa	Predicted RBP	10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	MICU2	Q8IYU8	434 aa		10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	SLC22A15	Q8IZD6	547 aa		10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	SVOPL	Q8N434	492 aa		10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	DTWD1	Q8N5C7	304 aa		10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	OR56A3	Q8NH54	315 aa		10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	PNPT1	Q8TCS8	783 aa	Known RBP	10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	SKA2	Q8WVK7	121 aa	Predicted RBP	10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	REPS1	Q96D71	796 aa		10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	RMND5B	Q96G75	393 aa	Predicted RBP	10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	LINC00615	Q96LM1	132 aa	Predicted RBP	10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	COQ10A	Q96MF6	247 aa		10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	PRPF18	Q99633	342 aa	Known RBP	10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	ADI1	Q9BV57	179 aa		10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	TMEM106C	Q9BVX2	250 aa		10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	PAIP1	Q9H074	479 aa	Known RBP	10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	KAT8	Q9H7Z6	458 aa	Known RBP	10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	FARSB	Q9NSD9	589 aa	Known RBP	10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	SPATA6	Q9NWH7	488 aa	Predicted RBP	10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	VAPA	Q9P0L0	249 aa		10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	GMPR2	Q9P2T1	348 aa	Known RBP	10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	VPS29	Q9UBQ0	182 aa		10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	ZNHIT2	Q9UHR6	403 aa		10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	INVS	Q9Y283	1065 aa		10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	MRPS23	Q9Y3D9	190 aa	Known RBP	10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	PCNT	O95613	3336 aa		10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	MTCL1	Q9Y4B5	1905 aa	Known RBP	10.41	□□□□□ -0.74
PUF60-213	ENST00000528999	EDDM13	A0A1B0GTR0	161 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	SAC3D1	A6NKF1	404 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	EVPLL	A8MZ36	301 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	DLGAP1	O14490	977 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	DFNA5	O60443	496 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	RFPL2	O75678	378 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	NFATC1	O95644	943 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	ELFN1	P0C7U0	828 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	MTHFD1	P11586	935 aa	Known RBP	10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	PPIB	P23284	216 aa	Known RBP	10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	OXTR	P30559	389 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	ETV3	P41162	512 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	GZMM	P51124	257 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	ALDH3A2	P51648	485 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	RPS6KA3	P51812	740 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	YBX1	P67809	324 aa	Known RBP	10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	CHIT1	Q13231	466 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	LSAMP	Q13449	338 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	PTGR1	Q14914	329 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	DUOXA1	Q1HG43	343 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	ZXDC	Q2QGD7	858 aa	Predicted RBP	10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	TMEM52B	Q4KMG9	183 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	SYTL3	Q4VX76	610 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	SGO1	Q5FBB7	561 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	HABP4	Q5JVS0	413 aa	Known RBP	10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	SPANXN4	Q5MJ08	99 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	FAM219B	Q5XKK7	198 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	NOXRED1	Q6NXP6	359 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	NEK5	Q6P3R8	708 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	ERICH5	Q6P6B1	374 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	SUSD1	Q6UWL2	747 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	ABRAXAS1	Q6UWZ7	409 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	B3GNT6	Q6ZMB0	384 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	USP51	Q70EK9	711 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	GRASP	Q7Z6J2	395 aa	Predicted RBP	10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	SERPINA11	Q86U17	422 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	GPR180	Q86V85	440 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	THOC6	Q86W42	341 aa	Known RBP	10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	VRK3	Q8IV63	474 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	ADHFE1	Q8IWW8	467 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	TRIML2	Q8N7C3	387 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	RASGEF1A	Q8N9B8	481 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	ZNF548	Q8NEK5	533 aa	Predicted RBP	10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	OR8J2	Q8NGG1	315 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	SETD7	Q8WTS6	366 aa	Known RBP	10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	SCAMP4	Q969E2	229 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	RAB7B	Q96AH8	199 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	ZNF707	Q96C28	371 aa	Predicted RBP	10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	AP2M1	Q96CW1	435 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	CXorf40B	Q96DE9	158 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	WDR34	Q96EX3	536 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	DTD2	Q96FN9	168 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	AURKB	Q96GD4	344 aa	Predicted RBP	10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	PPP1R16A	Q96I34	528 aa		10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	REXO5	Q96IC2	774 aa	Known RBP	10.4	□□□□□ -0.74
PUF60-213	ENST00000528999	ZSWIM3	Q96MP5	696 aa		10.4	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms