RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 CXCL12P48061 93 aa19.88■□□□□ 0.77
SMCO4-203ENST00000526869 STX1BP61266 288 aa19.88■□□□□ 0.77
SMCO4-203ENST00000526869 ZXDAP98168 799 aa19.88■□□□□ 0.77
SMCO4-203ENST00000526869 IRF8Q02556 426 aa19.88■□□□□ 0.77
SMCO4-203ENST00000526869 CHIT1Q13231 466 aa19.88■□□□□ 0.77
SMCO4-203ENST00000526869 GSTA3Q16772 222 aa19.88■□□□□ 0.77
SMCO4-203ENST00000526869 ALG11Q2TAA5 492 aa19.88■□□□□ 0.77
SMCO4-203ENST00000526869 TCHHL1Q5QJ38 904 aaPredicted RBP19.88■□□□□ 0.77
SMCO4-203ENST00000526869 GRHL2Q6ISB3 625 aa19.88■□□□□ 0.77
SMCO4-203ENST00000526869 ABRAXAS1Q6UWZ7 409 aa19.88■□□□□ 0.77
SMCO4-203ENST00000526869 SLC36A4Q6YBV0 504 aa19.88■□□□□ 0.77
SMCO4-203ENST00000526869 RAB42Q8N4Z0 105 aa19.88■□□□□ 0.77
SMCO4-203ENST00000526869 RLN3Q8WXF3 142 aa19.88■□□□□ 0.77
SMCO4-203ENST00000526869 WDR34Q96EX3 536 aa19.88■□□□□ 0.77
SMCO4-203ENST00000526869 SPACA7Q96KW9 195 aa19.88■□□□□ 0.77
SMCO4-203ENST00000526869 C12orf66Q96MD2 445 aa19.88■□□□□ 0.77
SMCO4-203ENST00000526869 OR4K3Q96R72 315 aa19.88■□□□□ 0.77
SMCO4-203ENST00000526869 RAB11FIP5Q9BXF6 653 aa19.88■□□□□ 0.77
SMCO4-203ENST00000526869 EHD1Q9H4M9 534 aa19.88■□□□□ 0.77
SMCO4-203ENST00000526869 TMEM45AQ9NWC5 275 aa19.88■□□□□ 0.77
SMCO4-203ENST00000526869 WDR37Q9Y2I8 494 aa19.88■□□□□ 0.77
SMCO4-203ENST00000526869 DYRK1BQ9Y463 629 aa19.88■□□□□ 0.77
SMCO4-203ENST00000526869 PLEKHM1Q9Y4G2 1056 aa19.88■□□□□ 0.77
SMCO4-203ENST00000526869 NPIPB8E9PQR5 432 aa19.87■□□□□ 0.77
SMCO4-203ENST00000526869 RGS14O43566 566 aa19.87■□□□□ 0.77
SMCO4-203ENST00000526869 KDM1AO60341 852 aa19.87■□□□□ 0.77
SMCO4-203ENST00000526869 COX4I1P13073 169 aa19.87■□□□□ 0.77
SMCO4-203ENST00000526869 IDO1P14902 403 aa19.87■□□□□ 0.77
SMCO4-203ENST00000526869 RPL10P27635 214 aaKnown RBP19.87■□□□□ 0.77
SMCO4-203ENST00000526869 ACADVLP49748 655 aa19.87■□□□□ 0.77
SMCO4-203ENST00000526869 ERVK-8P63133 956 aa19.87■□□□□ 0.77
SMCO4-203ENST00000526869 GRIK2Q13002 908 aa19.87■□□□□ 0.77
SMCO4-203ENST00000526869 ABRAXAS2Q15018 415 aa19.87■□□□□ 0.77
SMCO4-203ENST00000526869 MAPRE2Q15555 327 aa19.87■□□□□ 0.77
SMCO4-203ENST00000526869 ATP6AP1LQ52LC2 224 aa19.87■□□□□ 0.77
SMCO4-203ENST00000526869 C10orf62Q5T681 223 aaPredicted RBP19.87■□□□□ 0.77
SMCO4-203ENST00000526869 FAM219BQ5XKK7 198 aa19.87■□□□□ 0.77
SMCO4-203ENST00000526869 Q6ZSR9 355 aa19.87■□□□□ 0.77
SMCO4-203ENST00000526869 FAM160A2Q8N612 972 aaPredicted RBP19.87■□□□□ 0.77
SMCO4-203ENST00000526869 OR2T11Q8NH01 316 aa19.87■□□□□ 0.77
SMCO4-203ENST00000526869 RP9Q8TA86 221 aaKnown RBP19.87■□□□□ 0.77
SMCO4-203ENST00000526869 HMGCLL1Q8TB92 370 aa19.87■□□□□ 0.77
SMCO4-203ENST00000526869 PPP3R2Q96LZ3 170 aa19.87■□□□□ 0.77
SMCO4-203ENST00000526869 BTBD10Q9BSF8 475 aa19.87■□□□□ 0.77
SMCO4-203ENST00000526869 HAUS8Q9BT25 410 aa19.87■□□□□ 0.77
SMCO4-203ENST00000526869 MENTQ9BUN1 341 aa19.87■□□□□ 0.77
SMCO4-203ENST00000526869 PCBD2Q9H0N5 130 aa19.87■□□□□ 0.77
SMCO4-203ENST00000526869 C1orf21Q9H246 121 aa19.87■□□□□ 0.77
SMCO4-203ENST00000526869 CCL27Q9Y4X3 112 aa19.87■□□□□ 0.77
SMCO4-203ENST00000526869 SPTY2D1-AS1A0A0U1RR47 76 aa19.86■□□□□ 0.77
SMCO4-203ENST00000526869 PDZK1P1A8MUH7 402 aa19.86■□□□□ 0.77
SMCO4-203ENST00000526869 H0YIV9 168 aa19.86■□□□□ 0.77
SMCO4-203ENST00000526869 K7ESF4 209 aa19.86■□□□□ 0.77
SMCO4-203ENST00000526869 AXIN1O15169 862 aa19.86■□□□□ 0.77
SMCO4-203ENST00000526869 PRAMEF4O60810 478 aa19.86■□□□□ 0.77
SMCO4-203ENST00000526869 RASGRP1O95267 797 aa19.86■□□□□ 0.77
SMCO4-203ENST00000526869 TNFP01375 233 aa19.86■□□□□ 0.77
SMCO4-203ENST00000526869 ALDOCP09972 364 aaKnown RBP19.86■□□□□ 0.77
SMCO4-203ENST00000526869 MTHFD1P11586 935 aaKnown RBP19.86■□□□□ 0.77
SMCO4-203ENST00000526869 EZRP15311 586 aaKnown RBP19.86■□□□□ 0.77
SMCO4-203ENST00000526869 NDUFS1P28331 727 aa19.86■□□□□ 0.77
SMCO4-203ENST00000526869 HOXA6P31267 233 aa19.86■□□□□ 0.77
SMCO4-203ENST00000526869 ZRSR2Q15696 482 aaKnown RBP19.86■□□□□ 0.77
SMCO4-203ENST00000526869 RPE65Q16518 533 aa19.86■□□□□ 0.77
SMCO4-203ENST00000526869 XKR6Q5GH73 641 aa19.86■□□□□ 0.77
SMCO4-203ENST00000526869 C6orf136Q5SQH8 315 aa19.86■□□□□ 0.77
SMCO4-203ENST00000526869 PRAMEF9Q5VWM5 478 aa19.86■□□□□ 0.77
SMCO4-203ENST00000526869 LCTLQ6UWM7 567 aa19.86■□□□□ 0.77
SMCO4-203ENST00000526869 SLCO4C1Q6ZQN7 724 aa19.86■□□□□ 0.77
SMCO4-203ENST00000526869 IQCHQ86VS3 1027 aa19.86■□□□□ 0.77
SMCO4-203ENST00000526869 MYLK4Q86YV6 388 aaPredicted RBP19.86■□□□□ 0.77
SMCO4-203ENST00000526869 SLC22A18ASQ8N1D0 253 aa19.86■□□□□ 0.77
SMCO4-203ENST00000526869 FRMD1Q8N878 549 aa19.86■□□□□ 0.77
SMCO4-203ENST00000526869 PPFIBP2Q8ND30 876 aa19.86■□□□□ 0.77
SMCO4-203ENST00000526869 TSACCQ96A04 125 aaPredicted RBP19.86■□□□□ 0.77
SMCO4-203ENST00000526869 MARK4Q96L34 752 aa19.86■□□□□ 0.77
SMCO4-203ENST00000526869 CAMK1GQ96NX5 476 aa19.86■□□□□ 0.77
SMCO4-203ENST00000526869 FERD3LQ96RJ6 166 aa19.86■□□□□ 0.77
SMCO4-203ENST00000526869 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.86■□□□□ 0.77
SMCO4-203ENST00000526869 CIDEBQ9UHD4 219 aa19.86■□□□□ 0.77
SMCO4-203ENST00000526869 ZNF490Q9ULM2 529 aaPredicted RBP19.86■□□□□ 0.77
SMCO4-203ENST00000526869 G3BP2Q9UN86 482 aaKnown RBP19.86■□□□□ 0.77
SMCO4-203ENST00000526869 TDRKHQ9Y2W6 561 aaKnown RBP19.86■□□□□ 0.77
SMCO4-203ENST00000526869 TRIOO75962 3097 aa19.85■□□□□ 0.77
SMCO4-203ENST00000526869 E7EQ34 232 aa19.85■□□□□ 0.77
SMCO4-203ENST00000526869 PSMD12O00232 456 aaPredicted RBP19.85■□□□□ 0.77
SMCO4-203ENST00000526869 FFAR3O14843 346 aa19.85■□□□□ 0.77
SMCO4-203ENST00000526869 GPR42O15529 346 aa19.85■□□□□ 0.77
SMCO4-203ENST00000526869 THEGLP0DJG4 465 aa19.85■□□□□ 0.77
SMCO4-203ENST00000526869 NPPBP16860 134 aa19.85■□□□□ 0.77
SMCO4-203ENST00000526869 PRPH2P23942 346 aa19.85■□□□□ 0.77
SMCO4-203ENST00000526869 EMX2Q04743 252 aa19.85■□□□□ 0.77
SMCO4-203ENST00000526869 DOC2AQ14183 400 aa19.85■□□□□ 0.77
SMCO4-203ENST00000526869 CLCA4Q14CN2 919 aa19.85■□□□□ 0.77
SMCO4-203ENST00000526869 CPSF6Q16630 551 aaKnown RBP eCLIP19.85■□□□□ 0.77
SMCO4-203ENST00000526869 USP39Q53GS9 565 aaKnown RBP19.85■□□□□ 0.77
SMCO4-203ENST00000526869 PRAMEF14Q5SWL7 426 aa19.85■□□□□ 0.77
SMCO4-203ENST00000526869 PRAMEF13Q5VWM6 474 aa19.85■□□□□ 0.77
SMCO4-203ENST00000526869 FRG2Q64ET8 278 aa19.85■□□□□ 0.77
SMCO4-203ENST00000526869 ATG9BQ674R7 924 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms