RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 ISM1B1AKI9 464 aa13.67□□□□□ -0.22
CPSF1-201ENST00000526271 GPC4O75487 556 aa13.67□□□□□ -0.22
CPSF1-201ENST00000526271 ALPPP05187 535 aa13.67□□□□□ -0.22
CPSF1-201ENST00000526271 MSNP26038 577 aaKnown RBP13.67□□□□□ -0.22
CPSF1-201ENST00000526271 GRIA1P42261 906 aa13.67□□□□□ -0.22
CPSF1-201ENST00000526271 NSG1P42857 185 aa13.67□□□□□ -0.22
CPSF1-201ENST00000526271 COPS2P61201 443 aa13.67□□□□□ -0.22
CPSF1-201ENST00000526271 CCZ1BP86790 482 aa13.67□□□□□ -0.22
CPSF1-201ENST00000526271 CCZ1P86791 482 aaPredicted RBP13.67□□□□□ -0.22
CPSF1-201ENST00000526271 ITIH4Q14624 930 aa13.67□□□□□ -0.22
CPSF1-201ENST00000526271 CYP2A13Q16696 494 aa13.67□□□□□ -0.22
CPSF1-201ENST00000526271 DARS2Q6PI48 645 aaKnown RBP13.67□□□□□ -0.22
CPSF1-201ENST00000526271 SLC22A15Q8IZD6 547 aa13.67□□□□□ -0.22
CPSF1-201ENST00000526271 TAB3Q8N5C8 712 aaPredicted RBP13.67□□□□□ -0.22
CPSF1-201ENST00000526271 LRRC57Q8N9N7 239 aa13.67□□□□□ -0.22
CPSF1-201ENST00000526271 FAM71DQ8N9W8 422 aa13.67□□□□□ -0.22
CPSF1-201ENST00000526271 STYXQ8WUJ0 223 aa13.67□□□□□ -0.22
CPSF1-201ENST00000526271 MARVELD3Q96A59 401 aa13.67□□□□□ -0.22
CPSF1-201ENST00000526271 FKBP10Q96AY3 582 aa13.67□□□□□ -0.22
CPSF1-201ENST00000526271 C17orf62Q9BQA9 187 aa13.67□□□□□ -0.22
CPSF1-201ENST00000526271 EFR3BQ9Y2G0 817 aa13.67□□□□□ -0.22
CPSF1-201ENST00000526271 MTORP42345 2549 aa13.66□□□□□ -0.22
CPSF1-201ENST00000526271 CACNA1CQ13936 2221 aa13.66□□□□□ -0.22
CPSF1-201ENST00000526271 A0A0U1RQJ8 604 aa13.66□□□□□ -0.22
CPSF1-201ENST00000526271 A0A1B0GX78 115 aa13.66□□□□□ -0.22
CPSF1-201ENST00000526271 MACROD2A1Z1Q3 448 aa13.66□□□□□ -0.22
CPSF1-201ENST00000526271 DSCR3O14972 297 aa13.66□□□□□ -0.22
CPSF1-201ENST00000526271 IPO13O94829 963 aaKnown RBP13.66□□□□□ -0.22
CPSF1-201ENST00000526271 CELA2AP08217 269 aa13.66□□□□□ -0.22
CPSF1-201ENST00000526271 STSP08842 583 aa13.66□□□□□ -0.22
CPSF1-201ENST00000526271 GSTM1P09488 218 aa13.66□□□□□ -0.22
CPSF1-201ENST00000526271 EDN3P14138 238 aa13.66□□□□□ -0.22
CPSF1-201ENST00000526271 ALAS2P22557 587 aa13.66□□□□□ -0.22
CPSF1-201ENST00000526271 CTNNA2P26232 953 aa13.66□□□□□ -0.22
CPSF1-201ENST00000526271 PSMB5P28074 263 aa13.66□□□□□ -0.22
CPSF1-201ENST00000526271 GSTM4Q03013 218 aa13.66□□□□□ -0.22
CPSF1-201ENST00000526271 KLF1Q13351 362 aaPredicted RBP13.66□□□□□ -0.22
CPSF1-201ENST00000526271 ZNF169Q14929 603 aaPredicted RBP13.66□□□□□ -0.22
CPSF1-201ENST00000526271 KIR2DS3Q14952 304 aa13.66□□□□□ -0.22
CPSF1-201ENST00000526271 FRMPD2BQ6IN97 320 aa13.66□□□□□ -0.22
CPSF1-201ENST00000526271 LAPTM4BQ86VI4 370 aa13.66□□□□□ -0.22
CPSF1-201ENST00000526271 DNAJB14Q8TBM8 379 aa13.66□□□□□ -0.22
CPSF1-201ENST00000526271 C8orf44Q96CB5 159 aa13.66□□□□□ -0.22
CPSF1-201ENST00000526271 NDC1Q9BTX1 674 aa13.66□□□□□ -0.22
CPSF1-201ENST00000526271 LACRTQ9GZZ8 138 aa13.66□□□□□ -0.22
CPSF1-201ENST00000526271 WDR54Q9H977 334 aa13.66□□□□□ -0.22
CPSF1-201ENST00000526271 CUTCQ9NTM9 273 aa13.66□□□□□ -0.22
CPSF1-201ENST00000526271 TXLNGQ9NUQ3 528 aa13.66□□□□□ -0.22
CPSF1-201ENST00000526271 FEZ2Q9UHY8 353 aaPredicted RBP13.66□□□□□ -0.22
CPSF1-201ENST00000526271 CDC23Q9UJX2 597 aa13.66□□□□□ -0.22
CPSF1-201ENST00000526271 ENTPD4Q9Y227 616 aa13.66□□□□□ -0.22
CPSF1-201ENST00000526271 MAU2Q9Y6X3 613 aa13.66□□□□□ -0.22
CPSF1-201ENST00000526271 LOC105369274A0A096LPK9 316 aa13.65□□□□□ -0.22
CPSF1-201ENST00000526271 LOC102723532A0A0G2JNH3 316 aa13.65□□□□□ -0.22
CPSF1-201ENST00000526271 A0A1W2PPV9 198 aa13.65□□□□□ -0.22
CPSF1-201ENST00000526271 FITM1A5D6W6 292 aa13.65□□□□□ -0.22
CPSF1-201ENST00000526271 GOT2P00505 430 aaKnown RBP13.65□□□□□ -0.22
CPSF1-201ENST00000526271 ALBP02768 609 aa13.65□□□□□ -0.22
CPSF1-201ENST00000526271 PTMAP06454 111 aaKnown RBP13.65□□□□□ -0.22
CPSF1-201ENST00000526271 CD9P21926 228 aa13.65□□□□□ -0.22
CPSF1-201ENST00000526271 SOX11P35716 441 aa13.65□□□□□ -0.22
CPSF1-201ENST00000526271 RAB28P51157 221 aa13.65□□□□□ -0.22
CPSF1-201ENST00000526271 KCNK10P57789 538 aa13.65□□□□□ -0.22
CPSF1-201ENST00000526271 ACVR1Q04771 509 aa13.65□□□□□ -0.22
CPSF1-201ENST00000526271 PRPSAP1Q14558 356 aa13.65□□□□□ -0.22
CPSF1-201ENST00000526271 PARP6Q2NL67 630 aa13.65□□□□□ -0.22
CPSF1-201ENST00000526271 SP5Q6BEB4 398 aaPredicted RBP13.65□□□□□ -0.22
CPSF1-201ENST00000526271 FIGLAQ6QHK4 219 aa13.65□□□□□ -0.22
CPSF1-201ENST00000526271 LINC00696Q6ZRV3 163 aa13.65□□□□□ -0.22
CPSF1-201ENST00000526271 PRUNE1Q86TP1 453 aa13.65□□□□□ -0.22
CPSF1-201ENST00000526271 LDB1Q86U70 411 aaPredicted RBP13.65□□□□□ -0.22
CPSF1-201ENST00000526271 FJX1Q86VR8 437 aa13.65□□□□□ -0.22
CPSF1-201ENST00000526271 OR4N4Q8N0Y3 316 aa13.65□□□□□ -0.22
CPSF1-201ENST00000526271 KRT222Q8N1A0 295 aa13.65□□□□□ -0.22
CPSF1-201ENST00000526271 OR52K1Q8NGK4 314 aa13.65□□□□□ -0.22
CPSF1-201ENST00000526271 SLC35B2Q8TB61 432 aa13.65□□□□□ -0.22
CPSF1-201ENST00000526271 DENND1AQ8TEH3 1009 aa13.65□□□□□ -0.22
CPSF1-201ENST00000526271 N4BP2L2Q92802 583 aaPredicted RBP13.65□□□□□ -0.22
CPSF1-201ENST00000526271 C10orf90Q96M02 699 aa13.65□□□□□ -0.22
CPSF1-201ENST00000526271 KCNF1Q9H3M0 494 aa13.65□□□□□ -0.22
CPSF1-201ENST00000526271 VPS37BQ9H9H4 285 aa13.65□□□□□ -0.22
CPSF1-201ENST00000526271 MARCH4Q9P2E8 410 aaPredicted RBP13.65□□□□□ -0.22
CPSF1-201ENST00000526271 POLG2Q9UHN1 485 aa13.65□□□□□ -0.22
CPSF1-201ENST00000526271 RUVBL2Q9Y230 463 aaKnown RBP13.65□□□□□ -0.22
CPSF1-201ENST00000526271 NFS1Q9Y697 457 aa13.65□□□□□ -0.22
CPSF1-201ENST00000526271 NF1P21359 2839 aa13.65□□□□□ -0.22
CPSF1-201ENST00000526271 SCN2AQ99250 2005 aa13.64□□□□□ -0.23
CPSF1-201ENST00000526271 GRID2IPA4D2P6 1211 aa13.64□□□□□ -0.23
CPSF1-201ENST00000526271 FFAR3O14843 346 aa13.64□□□□□ -0.23
CPSF1-201ENST00000526271 GPR42O15529 346 aa13.64□□□□□ -0.23
CPSF1-201ENST00000526271 IGHEP01854 428 aa13.64□□□□□ -0.23
CPSF1-201ENST00000526271 MFAP5Q13361 173 aa13.64□□□□□ -0.23
CPSF1-201ENST00000526271 ELOAQ14241 798 aaKnown RBP13.64□□□□□ -0.23
CPSF1-201ENST00000526271 SPA17Q15506 151 aa13.64□□□□□ -0.23
CPSF1-201ENST00000526271 ATG9BQ674R7 924 aa13.64□□□□□ -0.23
CPSF1-201ENST00000526271 ARHGEF39Q8N4T4 335 aa13.64□□□□□ -0.23
CPSF1-201ENST00000526271 OR2L8Q8NGY9 312 aa13.64□□□□□ -0.23
CPSF1-201ENST00000526271 ITLN2Q8WWU7 325 aaPredicted RBP13.64□□□□□ -0.23
CPSF1-201ENST00000526271 TM9SF4Q92544 642 aa13.64□□□□□ -0.23
CPSF1-201ENST00000526271 HDAC10Q969S8 669 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms