RNA–Protein interactions for RNA: ENST00000525459.1

PTPRK-218, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2 BASIC

Gene PTPRK, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-218ENST00000525459 USP53Q70EK8 1073 aa18.09■□□□□ 0.49
PTPRK-218ENST00000525459 RAB44Q7Z6P3 723 aaPredicted RBP18.09■□□□□ 0.49
PTPRK-218ENST00000525459 KMT5CQ86Y97 462 aa18.09■□□□□ 0.49
PTPRK-218ENST00000525459 SPNS2Q8IVW8 549 aa18.09■□□□□ 0.49
PTPRK-218ENST00000525459 DCBLD1Q8N8Z6 715 aa18.09■□□□□ 0.49
PTPRK-218ENST00000525459 GPR78Q96P69 363 aa18.09■□□□□ 0.49
PTPRK-218ENST00000525459 IL17FQ96PD4 163 aa18.09■□□□□ 0.49
PTPRK-218ENST00000525459 MRPL57Q9BQC6 102 aaKnown RBP18.09■□□□□ 0.49
PTPRK-218ENST00000525459 STRADBQ9C0K7 418 aa18.09■□□□□ 0.49
PTPRK-218ENST00000525459 MRPL46Q9H2W6 279 aaKnown RBP18.09■□□□□ 0.49
PTPRK-218ENST00000525459 CNOT10Q9H9A5 744 aaKnown RBP18.09■□□□□ 0.49
PTPRK-218ENST00000525459 ATXN7L1Q9ULK2 861 aaPredicted RBP18.09■□□□□ 0.49
PTPRK-218ENST00000525459 HEATR5BQ9P2D3 2071 aa18.09■□□□□ 0.49
PTPRK-218ENST00000525459 E7ENX8 843 aa18.09■□□□□ 0.49
PTPRK-218ENST00000525459 HGSO14964 777 aaPredicted RBP18.09■□□□□ 0.49
PTPRK-218ENST00000525459 GUCA1CO95843 209 aa18.09■□□□□ 0.49
PTPRK-218ENST00000525459 KRT4P19013 534 aa18.09■□□□□ 0.49
PTPRK-218ENST00000525459 GLRBP48167 497 aa18.09■□□□□ 0.49
PTPRK-218ENST00000525459 TAP2Q03519 686 aa18.09■□□□□ 0.49
PTPRK-218ENST00000525459 ZFP36L1Q07352 338 aaKnown RBP18.09■□□□□ 0.49
PTPRK-218ENST00000525459 SULT1C3Q6IMI6 304 aa18.09■□□□□ 0.49
PTPRK-218ENST00000525459 DGLUCYQ7Z3D6 616 aa18.09■□□□□ 0.49
PTPRK-218ENST00000525459 PLD6Q8N2A8 252 aaKnown RBP18.09■□□□□ 0.49
PTPRK-218ENST00000525459 TGM7Q96PF1 710 aa18.09■□□□□ 0.49
PTPRK-218ENST00000525459 SMC6Q96SB8 1091 aa18.09■□□□□ 0.49
PTPRK-218ENST00000525459 PITPNM3Q9BZ71 974 aa18.09■□□□□ 0.49
PTPRK-218ENST00000525459 UNKQ9C0B0 810 aaKnown RBP18.09■□□□□ 0.49
PTPRK-218ENST00000525459 C1GALT1Q9NS00 363 aa18.09■□□□□ 0.49
PTPRK-218ENST00000525459 CD274Q9NZQ7 290 aa18.09■□□□□ 0.49
PTPRK-218ENST00000525459 AKAP7Q9P0M2 348 aaPredicted RBP18.09■□□□□ 0.49
PTPRK-218ENST00000525459 CIDEBQ9UHD4 219 aa18.09■□□□□ 0.49
PTPRK-218ENST00000525459 PCDHB11Q9Y5F2 797 aa18.09■□□□□ 0.49
PTPRK-218ENST00000525459 IGHV5-10-1A0A0J9YXX1 117 aa18.08■□□□□ 0.48
PTPRK-218ENST00000525459 A0A1W2PPM1 405 aa18.08■□□□□ 0.48
PTPRK-218ENST00000525459 ISM1B1AKI9 464 aa18.08■□□□□ 0.48
PTPRK-218ENST00000525459 GOLGA8RI6L899 631 aa18.08■□□□□ 0.48
PTPRK-218ENST00000525459 COPEO14579 308 aa18.08■□□□□ 0.48
PTPRK-218ENST00000525459 PRDX3P30048 256 aaKnown RBP18.08■□□□□ 0.48
PTPRK-218ENST00000525459 RPA3P35244 121 aaPredicted RBP18.08■□□□□ 0.48
PTPRK-218ENST00000525459 TBPL1P62380 186 aa18.08■□□□□ 0.48
PTPRK-218ENST00000525459 CFHR1Q03591 330 aa18.08■□□□□ 0.48
PTPRK-218ENST00000525459 SLC18A2Q05940 514 aa18.08■□□□□ 0.48
PTPRK-218ENST00000525459 EIF3IQ13347 325 aaKnown RBP18.08■□□□□ 0.48
PTPRK-218ENST00000525459 ISXQ2M1V0 245 aa18.08■□□□□ 0.48
PTPRK-218ENST00000525459 CAPN13Q6MZZ7 669 aaPredicted RBP18.08■□□□□ 0.48
PTPRK-218ENST00000525459 SH2D5Q6ZV89 423 aa18.08■□□□□ 0.48
PTPRK-218ENST00000525459 SRRM1Q8IYB3 904 aaKnown RBP18.08■□□□□ 0.48
PTPRK-218ENST00000525459 LIN37Q96GY3 246 aaPredicted RBP18.08■□□□□ 0.48
PTPRK-218ENST00000525459 SCYL1Q96KG9 808 aa18.08■□□□□ 0.48
PTPRK-218ENST00000525459 IQCGQ9H095 443 aaKnown RBP18.08■□□□□ 0.48
PTPRK-218ENST00000525459 INTS7Q9NVH2 962 aaKnown RBP18.08■□□□□ 0.48
PTPRK-218ENST00000525459 SEMA5BQ9P283 1151 aa18.08■□□□□ 0.48
PTPRK-218ENST00000525459 XPR1Q9UBH6 696 aa18.08■□□□□ 0.48
PTPRK-218ENST00000525459 GRID1Q9ULK0 1009 aa18.08■□□□□ 0.48
PTPRK-218ENST00000525459 ACTL7BQ9Y614 415 aa18.08■□□□□ 0.48
PTPRK-218ENST00000525459 A0A0J9YY10 115 aa18.07■□□□□ 0.48
PTPRK-218ENST00000525459 SUPT3HB4E1H0 165 aa18.07■□□□□ 0.48
PTPRK-218ENST00000525459 MAP3K7O43318 606 aa18.07■□□□□ 0.48
PTPRK-218ENST00000525459 SUPT3HO75486 399 aa18.07■□□□□ 0.48
PTPRK-218ENST00000525459 RASSF9O75901 435 aa18.07■□□□□ 0.48
PTPRK-218ENST00000525459 UGT2B7P16662 529 aa18.07■□□□□ 0.48
PTPRK-218ENST00000525459 CDH3P22223 829 aa18.07■□□□□ 0.48
PTPRK-218ENST00000525459 CRHR1P34998 444 aa18.07■□□□□ 0.48
PTPRK-218ENST00000525459 PDX1P52945 283 aa18.07■□□□□ 0.48
PTPRK-218ENST00000525459 GFERP55789 205 aa18.07■□□□□ 0.48
PTPRK-218ENST00000525459 CCDC153Q494R4 210 aa18.07■□□□□ 0.48
PTPRK-218ENST00000525459 CYB5D1Q6P9G0 228 aa18.07■□□□□ 0.48
PTPRK-218ENST00000525459 TMPRSS7Q7RTY8 843 aa18.07■□□□□ 0.48
PTPRK-218ENST00000525459 LRRC56Q8IYG6 542 aaPredicted RBP18.07■□□□□ 0.48
PTPRK-218ENST00000525459 OR56A3Q8NH54 315 aa18.07■□□□□ 0.48
PTPRK-218ENST00000525459 RHBDF1Q96CC6 855 aa18.07■□□□□ 0.48
PTPRK-218ENST00000525459 APOPT1Q96IL0 206 aa18.07■□□□□ 0.48
PTPRK-218ENST00000525459 CCDC74BQ96LY2 380 aa18.07■□□□□ 0.48
PTPRK-218ENST00000525459 OR2A14Q96R47 310 aa18.07■□□□□ 0.48
PTPRK-218ENST00000525459 MID2Q9UJV3 735 aa18.07■□□□□ 0.48
PTPRK-218ENST00000525459 KRT87PA6NCN2 255 aa18.06■□□□□ 0.48
PTPRK-218ENST00000525459 PRICKLE3O43900 615 aaPredicted RBP18.06■□□□□ 0.48
PTPRK-218ENST00000525459 CSO75390 466 aaKnown RBP18.06■□□□□ 0.48
PTPRK-218ENST00000525459 JUPP14923 745 aa18.06■□□□□ 0.48
PTPRK-218ENST00000525459 GGT5P36269 586 aa18.06■□□□□ 0.48
PTPRK-218ENST00000525459 GMPRP36959 345 aa18.06■□□□□ 0.48
PTPRK-218ENST00000525459 ABATP80404 500 aa18.06■□□□□ 0.48
PTPRK-218ENST00000525459 PHF19Q5T6S3 580 aa18.06■□□□□ 0.48
PTPRK-218ENST00000525459 PRAMEF13Q5VWM6 474 aa18.06■□□□□ 0.48
PTPRK-218ENST00000525459 METTL2BQ6P1Q9 378 aaKnown RBP18.06■□□□□ 0.48
PTPRK-218ENST00000525459 ZNF574Q6ZN55 896 aaPredicted RBP18.06■□□□□ 0.48
PTPRK-218ENST00000525459 MBOAT1Q6ZNC8 495 aa18.06■□□□□ 0.48
PTPRK-218ENST00000525459 TMPRSS9Q7Z410 1059 aa18.06■□□□□ 0.48
PTPRK-218ENST00000525459 KLHDC8AQ8IYD2 350 aa18.06■□□□□ 0.48
PTPRK-218ENST00000525459 LMNTD1Q8N9Z9 388 aa18.06■□□□□ 0.48
PTPRK-218ENST00000525459 MIPEPQ99797 713 aa18.06■□□□□ 0.48
PTPRK-218ENST00000525459 HAUS8Q9BT25 410 aa18.06■□□□□ 0.48
PTPRK-218ENST00000525459 SGPP1Q9BX95 441 aa18.06■□□□□ 0.48
PTPRK-218ENST00000525459 ACBD3Q9H3P7 528 aa18.06■□□□□ 0.48
PTPRK-218ENST00000525459 ZNF768Q9H5H4 540 aaKnown RBP18.06■□□□□ 0.48
PTPRK-218ENST00000525459 SPHK1Q9NYA1 384 aa18.06■□□□□ 0.48
PTPRK-218ENST00000525459 WWOXQ9NZC7 414 aa18.06■□□□□ 0.48
PTPRK-218ENST00000525459 ANKMY1Q9P2S6 941 aa18.06■□□□□ 0.48
PTPRK-218ENST00000525459 A0A1W2PPV9 198 aa18.06■□□□□ 0.48
PTPRK-218ENST00000525459 SMIM24O75264 130 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms