RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 TRAPPC9Q96Q05 1148 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 OR6C1Q96RD1 312 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 TMEM79Q9BSE2 394 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 DPH7Q9BTV6 452 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 DHRS4Q9BTZ2 278 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 SLC12A9Q9BXP2 914 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 FUT8Q9BYC5 575 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 STRADBQ9C0K7 418 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 SPRTNQ9H040 489 aaPredicted RBP4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 CENPHQ9H3R5 247 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 SYNPO2LQ9H987 977 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 UCK1Q9HA47 277 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 PARVBQ9HBI1 364 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 SYTL2Q9HCH5 934 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 SLC6A20Q9NP91 592 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 SLC39A1Q9NY26 324 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 FOXJ2Q9P0K8 574 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 TMEM216Q9P0N5 145 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 CPSF2Q9P2I0 782 aaKnown RBP4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 PSMC3IPQ9P2W1 217 aaPredicted RBP4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 TLK1Q9UKI8 766 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 ANGPTL2Q9UKU9 493 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 POMT2Q9UKY4 750 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 RAB21Q9UL25 225 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 CORO1CQ9ULV4 474 aaPredicted RBP4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 ACOT9Q9Y305 439 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 MN1Q10571 1320 aaPredicted RBP4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 ZNF292O60281 2723 aa4.44□□□□□ -1.7
CHMP4A-202ENST00000524955 DCHS1Q96JQ0 3298 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 A0A087X1B8 175 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 LOC105369274A0A096LPK9 316 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 IGKV1-8A0A0C4DH67 115 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 LOC102723532A0A0G2JNH3 316 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 A0A0J9YVX5 310 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 A0A0J9YY10 115 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 PABPN1LA6NDY0 278 aaKnown RBP4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 TLCD2A6NGC4 264 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 TMEM150CB9EJG8 249 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 C9orf172C9J069 976 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 H7BY64 318 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 TK2O00142 265 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 MYO1CO00159 1063 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 HAT1O14929 419 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 ZW10O43264 779 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 TLX3O43711 291 aaPredicted RBP4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 PRICKLE3O43900 615 aaPredicted RBP4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 CCNT2O60583 730 aaKnown RBP4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 CTSVO60911 334 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 SH3BGRLO75368 114 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 TCEA3O75764 348 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 KRT37O76014 449 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 WDR47O94967 919 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 SIX3O95343 332 aaPredicted RBP4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 B3GALT4O96024 378 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 MT-ND3P03897 115 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 NTRK1P04629 796 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 EIF2S1P05198 315 aaKnown RBP4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 C8GP07360 202 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 HIST1H2AGP0C0S8 130 aaPredicted RBP4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 SBK3P0C264 359 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 CDH1P12830 882 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 NPPBP16860 134 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 NELFEP18615 380 aaKnown RBP4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 HIST1H2ADP20671 130 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 VARSP26640 1264 aaKnown RBP4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 CRABP2P29373 138 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 OAS2P29728 719 aaKnown RBP4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 SLC5A2P31639 672 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 CCKBRP32239 447 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 CCNFP41002 786 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 SERPINB9P50453 376 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 CSRP3P50461 194 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 FOXL2P58012 376 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 ZNF844Q08AG5 666 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 SQSTM1Q13501 440 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 TUBB3Q13509 450 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 SLC9A5Q14940 896 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 TGFBIQ15582 683 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 CYP2A13Q16696 494 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 PFKFB4Q16877 469 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 KRT71Q3SY84 523 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 TAF1BQ53T94 588 aaPredicted RBP4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 TECRLQ5HYJ1 363 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 CATSPEREQ5SY80 951 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 CEP85LQ5SZL2 805 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 C1orf189Q5VU69 101 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 FAM69BQ5VUD6 431 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 PRAMEF13Q5VWM6 474 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 FCRL6Q6DN72 434 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 FRMPD2BQ6IN97 320 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 LRRC8EQ6NSJ5 796 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 EMBQ6PCB8 327 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 FAM199XQ6PEV8 388 aaPredicted RBP4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 KLHL35Q6PF15 583 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 FIGLAQ6QHK4 219 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 TAOK1Q7L7X3 1001 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 ERMP1Q7Z2K6 904 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 ISCA2Q86U28 154 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 SRRM1Q8IYB3 904 aaKnown RBP4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 LRRC56Q8IYG6 542 aaPredicted RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms