RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 ASIC5Q9NY37 505 aa16.36■□□□□ 0.21
SREK1-212ENST00000522912 SLAMF8Q9P0V8 285 aa16.36■□□□□ 0.21
SREK1-212ENST00000522912 OR1A2Q9Y585 309 aa16.36■□□□□ 0.21
SREK1-212ENST00000522912 TNRC18O15417 2968 aaPredicted RBP16.35■□□□□ 0.21
SREK1-212ENST00000522912 H3BQ06 376 aaPredicted RBP16.35■□□□□ 0.21
SREK1-212ENST00000522912 NVLO15381 856 aaKnown RBP16.35■□□□□ 0.21
SREK1-212ENST00000522912 UGDHO60701 494 aa16.35■□□□□ 0.21
SREK1-212ENST00000522912 CCR3P51677 355 aa16.35■□□□□ 0.21
SREK1-212ENST00000522912 DGKQP52824 942 aa16.35■□□□□ 0.21
SREK1-212ENST00000522912 MRPS22P82650 360 aaKnown RBP16.35■□□□□ 0.21
SREK1-212ENST00000522912 DOC2AQ14183 400 aa16.35■□□□□ 0.21
SREK1-212ENST00000522912 IER5LQ5T953 404 aa16.35■□□□□ 0.21
SREK1-212ENST00000522912 ICE2Q659A1 982 aa16.35■□□□□ 0.21
SREK1-212ENST00000522912 AMZ2Q86W34 360 aa16.35■□□□□ 0.21
SREK1-212ENST00000522912 OR14C36Q8NHC7 312 aa16.35■□□□□ 0.21
SREK1-212ENST00000522912 C1QTNF2Q9BXJ5 285 aa16.35■□□□□ 0.21
SREK1-212ENST00000522912 OSBPL6Q9BZF3 934 aa16.35■□□□□ 0.21
SREK1-212ENST00000522912 TRIM8Q9BZR9 551 aa16.35■□□□□ 0.21
SREK1-212ENST00000522912 TTYH1Q9H313 450 aaPredicted RBP16.35■□□□□ 0.21
SREK1-212ENST00000522912 CD207Q9UJ71 328 aa16.35■□□□□ 0.21
SREK1-212ENST00000522912 PIAS3Q9Y6X2 628 aa16.35■□□□□ 0.21
SREK1-212ENST00000522912 SERTM1A2A2V5 107 aa16.35■□□□□ 0.21
SREK1-212ENST00000522912 C2CD4DB7Z1M9 353 aa16.35■□□□□ 0.21
SREK1-212ENST00000522912 CLGNO14967 610 aa16.35■□□□□ 0.21
SREK1-212ENST00000522912 PLRG1O43660 514 aaKnown RBP16.35■□□□□ 0.21
SREK1-212ENST00000522912 DNAJA2O60884 412 aa16.35■□□□□ 0.21
SREK1-212ENST00000522912 BCKDHAP12694 445 aa16.35■□□□□ 0.21
SREK1-212ENST00000522912 HOXB2P14652 356 aa16.35■□□□□ 0.21
SREK1-212ENST00000522912 PRPH2P23942 346 aa16.35■□□□□ 0.21
SREK1-212ENST00000522912 VARSP26640 1264 aaKnown RBP16.35■□□□□ 0.21
SREK1-212ENST00000522912 TRIM23P36406 574 aa16.35■□□□□ 0.21
SREK1-212ENST00000522912 FOXM1Q08050 763 aa16.35■□□□□ 0.21
SREK1-212ENST00000522912 PCDH1Q08174 1060 aa16.35■□□□□ 0.21
SREK1-212ENST00000522912 USP39Q53GS9 565 aaKnown RBP16.35■□□□□ 0.21
SREK1-212ENST00000522912 C6orf10Q5SRN2 563 aa16.35■□□□□ 0.21
SREK1-212ENST00000522912 SLC2A7Q6PXP3 512 aa16.35■□□□□ 0.21
SREK1-212ENST00000522912 DHDDSQ86SQ9 333 aa16.35■□□□□ 0.21
SREK1-212ENST00000522912 LRRTM4Q86VH4 590 aa16.35■□□□□ 0.21
SREK1-212ENST00000522912 OR9A1PQ8NGU1 263 aa16.35■□□□□ 0.21
SREK1-212ENST00000522912 MAGEB10Q96LZ2 347 aaPredicted RBP16.35■□□□□ 0.21
SREK1-212ENST00000522912 ZNF570Q96NI8 536 aa16.35■□□□□ 0.21
SREK1-212ENST00000522912 BCAP29Q9UHQ4 241 aa16.35■□□□□ 0.21
SREK1-212ENST00000522912 DLGAP4Q9Y2H0 992 aa16.35■□□□□ 0.21
SREK1-212ENST00000522912 PCDHA9Q9Y5H5 950 aa16.35■□□□□ 0.21
SREK1-212ENST00000522912 A0A1W2PQU0 124 aa16.34■□□□□ 0.21
SREK1-212ENST00000522912 GRXCR2A6NFK2 248 aa16.34■□□□□ 0.21
SREK1-212ENST00000522912 CASP2P42575 452 aa16.34■□□□□ 0.21
SREK1-212ENST00000522912 RPS21P63220 83 aaKnown RBP16.34■□□□□ 0.21
SREK1-212ENST00000522912 TRAP1Q12931 704 aaKnown RBP16.34■□□□□ 0.21
SREK1-212ENST00000522912 TMEM259Q4ZIN3 620 aa16.34■□□□□ 0.21
SREK1-212ENST00000522912 CACHD1Q5VU97 1274 aa16.34■□□□□ 0.21
SREK1-212ENST00000522912 RALGPS2Q86X27 583 aaPredicted RBP16.34■□□□□ 0.21
SREK1-212ENST00000522912 KBTBD2Q8IY47 623 aa16.34■□□□□ 0.21
SREK1-212ENST00000522912 DPP10Q8N608 796 aa16.34■□□□□ 0.21
SREK1-212ENST00000522912 DNAJB14Q8TBM8 379 aa16.34■□□□□ 0.21
SREK1-212ENST00000522912 TMEM125Q96AQ2 219 aa16.34■□□□□ 0.21
SREK1-212ENST00000522912 CMTM7Q96FZ5 175 aa16.34■□□□□ 0.21
SREK1-212ENST00000522912 WDR26Q9H7D7 661 aa16.34■□□□□ 0.21
SREK1-212ENST00000522912 MYO10Q9HD67 2058 aa16.34■□□□□ 0.21
SREK1-212ENST00000522912 CROCCQ5TZA2 2017 aa16.33■□□□□ 0.21
SREK1-212ENST00000522912 DYTNA2CJ06 578 aa16.33■□□□□ 0.21
SREK1-212ENST00000522912 NPIPB8E9PQR5 432 aa16.33■□□□□ 0.21
SREK1-212ENST00000522912 DNTTP04053 509 aa16.33■□□□□ 0.21
SREK1-212ENST00000522912 TEAD1P28347 426 aa16.33■□□□□ 0.21
SREK1-212ENST00000522912 TBPL1P62380 186 aa16.33■□□□□ 0.21
SREK1-212ENST00000522912 TAF11Q15544 211 aa16.33■□□□□ 0.21
SREK1-212ENST00000522912 GRHL2Q6ISB3 625 aa16.33■□□□□ 0.21
SREK1-212ENST00000522912 PDZD3Q86UT5 571 aa16.33■□□□□ 0.21
SREK1-212ENST00000522912 LRRC56Q8IYG6 542 aaPredicted RBP16.33■□□□□ 0.21
SREK1-212ENST00000522912 SYTL1Q8IYJ3 562 aa16.33■□□□□ 0.21
SREK1-212ENST00000522912 KIAA2013Q8IYS2 634 aa16.33■□□□□ 0.21
SREK1-212ENST00000522912 OXR1Q8N573 874 aa16.33■□□□□ 0.21
SREK1-212ENST00000522912 KRTCAP2Q8N6L1 136 aa16.33■□□□□ 0.21
SREK1-212ENST00000522912 PHC3Q8NDX5 983 aa16.33■□□□□ 0.21
SREK1-212ENST00000522912 WDR20Q8TBZ3 569 aa16.33■□□□□ 0.21
SREK1-212ENST00000522912 APIPQ96GX9 242 aa16.33■□□□□ 0.21
SREK1-212ENST00000522912 DPY30Q9C005 99 aa16.33■□□□□ 0.21
SREK1-212ENST00000522912 TRPV5Q9NQA5 729 aa16.33■□□□□ 0.21
SREK1-212ENST00000522912 SH2B3Q9UQQ2 575 aa16.33■□□□□ 0.21
SREK1-212ENST00000522912 IFRD1O00458 451 aaPredicted RBP16.33■□□□□ 0.2
SREK1-212ENST00000522912 RNGTTO60942 597 aaKnown RBP16.33■□□□□ 0.2
SREK1-212ENST00000522912 FUCA1P04066 466 aa16.33■□□□□ 0.2
SREK1-212ENST00000522912 IGFBP4P22692 258 aa16.33■□□□□ 0.2
SREK1-212ENST00000522912 ADPRHP54922 357 aa16.33■□□□□ 0.2
SREK1-212ENST00000522912 RPA4Q13156 261 aa16.33■□□□□ 0.2
SREK1-212ENST00000522912 SGCGQ13326 291 aa16.33■□□□□ 0.2
SREK1-212ENST00000522912 MUM1Q2TAK8 710 aa16.33■□□□□ 0.2
SREK1-212ENST00000522912 RABL3Q5HYI8 236 aa16.33■□□□□ 0.2
SREK1-212ENST00000522912 UNC5DQ6UXZ4 953 aa16.33■□□□□ 0.2
SREK1-212ENST00000522912 DLEU7Q6UYE1 221 aa16.33■□□□□ 0.2
SREK1-212ENST00000522912 SPATA24Q86W54 205 aa16.33■□□□□ 0.2
SREK1-212ENST00000522912 CLHC1Q8NHS4 586 aa16.33■□□□□ 0.2
SREK1-212ENST00000522912 DNAJC9Q8WXX5 260 aa16.33■□□□□ 0.2
SREK1-212ENST00000522912 NEIL2Q969S2 332 aa16.33■□□□□ 0.2
SREK1-212ENST00000522912 ANKRD27Q96NW4 1050 aa16.33■□□□□ 0.2
SREK1-212ENST00000522912 SLC17A9Q9BYT1 436 aa16.33■□□□□ 0.2
SREK1-212ENST00000522912 FBRSQ9HAH7 460 aa16.33■□□□□ 0.2
SREK1-212ENST00000522912 KCNK12Q9HB15 430 aa16.33■□□□□ 0.2
SREK1-212ENST00000522912 LIMD1Q9UGP4 676 aa16.33■□□□□ 0.2
SREK1-212ENST00000522912 PSMD13Q9UNM6 376 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms