RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 GALNT7Q86SF2 657 aa17.2■□□□□ 0.34
CLK4-211ENST00000522556 ZC3HC1Q86WB0 502 aaKnown RBP17.2■□□□□ 0.34
CLK4-211ENST00000522556 TMEM126BQ8IUX1 230 aa17.2■□□□□ 0.34
CLK4-211ENST00000522556 OR9A1PQ8NGU1 263 aa17.2■□□□□ 0.34
CLK4-211ENST00000522556 PYROXD1Q8WU10 500 aa17.2■□□□□ 0.34
CLK4-211ENST00000522556 ASB11Q8WXH4 323 aa17.2■□□□□ 0.34
CLK4-211ENST00000522556 LINGO1Q96FE5 620 aa17.2■□□□□ 0.34
CLK4-211ENST00000522556 MIPEPQ99797 713 aa17.2■□□□□ 0.34
CLK4-211ENST00000522556 ACAT2Q9BWD1 397 aa17.2■□□□□ 0.34
CLK4-211ENST00000522556 ZDHHC18Q9NUE0 388 aa17.2■□□□□ 0.34
CLK4-211ENST00000522556 ZFATQ9P243 1243 aa17.2■□□□□ 0.34
CLK4-211ENST00000522556 KLHL42Q9P2K6 505 aa17.2■□□□□ 0.34
CLK4-211ENST00000522556 IGSF10Q6WRI0 2623 aa17.2■□□□□ 0.34
CLK4-211ENST00000522556 TCRBV9S1A1TA0A576 114 aa17.19■□□□□ 0.34
CLK4-211ENST00000522556 GFYI3L273 518 aa17.19■□□□□ 0.34
CLK4-211ENST00000522556 SLC16A8O95907 504 aa17.19■□□□□ 0.34
CLK4-211ENST00000522556 SYF2O95926 243 aaKnown RBP17.19■□□□□ 0.34
CLK4-211ENST00000522556 MAP4P27816 1152 aaKnown RBP17.19■□□□□ 0.34
CLK4-211ENST00000522556 CCNFP41002 786 aa17.19■□□□□ 0.34
CLK4-211ENST00000522556 GRIA3P42263 894 aa17.19■□□□□ 0.34
CLK4-211ENST00000522556 GUCY2DQ02846 1103 aa17.19■□□□□ 0.34
CLK4-211ENST00000522556 ABHD18Q0P651 414 aa17.19■□□□□ 0.34
CLK4-211ENST00000522556 MAP7Q14244 749 aa17.19■□□□□ 0.34
CLK4-211ENST00000522556 CYP2A13Q16696 494 aa17.19■□□□□ 0.34
CLK4-211ENST00000522556 FAM69BQ5VUD6 431 aa17.19■□□□□ 0.34
CLK4-211ENST00000522556 TTC23LQ6PF05 361 aa17.19■□□□□ 0.34
CLK4-211ENST00000522556 STRA8Q7Z7C7 330 aa17.19■□□□□ 0.34
CLK4-211ENST00000522556 ESX1Q8N693 406 aa17.19■□□□□ 0.34
CLK4-211ENST00000522556 LRRN4CLQ8ND94 238 aa17.19■□□□□ 0.34
CLK4-211ENST00000522556 OR2A1Q8NGT9 310 aa17.19■□□□□ 0.34
CLK4-211ENST00000522556 HMGCLL1Q8TB92 370 aa17.19■□□□□ 0.34
CLK4-211ENST00000522556 CT55Q8WUE5 264 aa17.19■□□□□ 0.34
CLK4-211ENST00000522556 TTC9Q92623 222 aa17.19■□□□□ 0.34
CLK4-211ENST00000522556 FCRL4Q96PJ5 515 aa17.19■□□□□ 0.34
CLK4-211ENST00000522556 MCMBPQ9BTE3 642 aa17.19■□□□□ 0.34
CLK4-211ENST00000522556 RAB11FIP5Q9BXF6 653 aa17.19■□□□□ 0.34
CLK4-211ENST00000522556 SLC12A9Q9BXP2 914 aa17.19■□□□□ 0.34
CLK4-211ENST00000522556 SPRTNQ9H040 489 aaPredicted RBP17.19■□□□□ 0.34
CLK4-211ENST00000522556 SYNPO2LQ9H987 977 aa17.19■□□□□ 0.34
CLK4-211ENST00000522556 GPN2Q9H9Y4 310 aaPredicted RBP17.19■□□□□ 0.34
CLK4-211ENST00000522556 SLC6A20Q9NP91 592 aa17.19■□□□□ 0.34
CLK4-211ENST00000522556 TAS2R13Q9NYV9 303 aa17.19■□□□□ 0.34
CLK4-211ENST00000522556 SPATA7Q9P0W8 599 aa17.19■□□□□ 0.34
CLK4-211ENST00000522556 PCM1Q15154 2024 aa17.19■□□□□ 0.34
CLK4-211ENST00000522556 ATMQ13315 3056 aa17.18■□□□□ 0.34
CLK4-211ENST00000522556 EIF3HO15372 352 aaKnown RBP eCLIP17.18■□□□□ 0.34
CLK4-211ENST00000522556 NKX2-8O15522 239 aa17.18■□□□□ 0.34
CLK4-211ENST00000522556 KDM1AO60341 852 aa17.18■□□□□ 0.34
CLK4-211ENST00000522556 CTSVO60911 334 aa17.18■□□□□ 0.34
CLK4-211ENST00000522556 CATP04040 527 aaKnown RBP17.18■□□□□ 0.34
CLK4-211ENST00000522556 ATXN8OSP0DMR3 200 aa17.18■□□□□ 0.34
CLK4-211ENST00000522556 ENO3P13929 434 aaPredicted RBP17.18■□□□□ 0.34
CLK4-211ENST00000522556 SAT1P21673 171 aa17.18■□□□□ 0.34
CLK4-211ENST00000522556 OAS2P29728 719 aaKnown RBP17.18■□□□□ 0.34
CLK4-211ENST00000522556 DLSTP36957 453 aa17.18■□□□□ 0.34
CLK4-211ENST00000522556 GMPRP36959 345 aa17.18■□□□□ 0.34
CLK4-211ENST00000522556 TSTA3Q13630 321 aaPredicted RBP17.18■□□□□ 0.34
CLK4-211ENST00000522556 SF1Q15637 639 aaKnown RBP17.18■□□□□ 0.34
CLK4-211ENST00000522556 PHKG1Q16816 387 aa17.18■□□□□ 0.34
CLK4-211ENST00000522556 UBE2R2Q712K3 238 aaPredicted RBP17.18■□□□□ 0.34
CLK4-211ENST00000522556 LRRC56Q8IYG6 542 aaPredicted RBP17.18■□□□□ 0.34
CLK4-211ENST00000522556 MMGT1Q8N4V1 131 aa17.18■□□□□ 0.34
CLK4-211ENST00000522556 DNAJC22Q8N4W6 341 aa17.18■□□□□ 0.34
CLK4-211ENST00000522556 OR2L3Q8NG85 312 aa17.18■□□□□ 0.34
CLK4-211ENST00000522556 ZNF480Q8WV37 535 aa17.18■□□□□ 0.34
CLK4-211ENST00000522556 SEC14L1Q92503 715 aa17.18■□□□□ 0.34
CLK4-211ENST00000522556 TRIM44Q96DX7 344 aaPredicted RBP17.18■□□□□ 0.34
CLK4-211ENST00000522556 TCTN2Q96GX1 697 aa17.18■□□□□ 0.34
CLK4-211ENST00000522556 LHX9Q9NQ69 397 aa17.18■□□□□ 0.34
CLK4-211ENST00000522556 ABCF3Q9NUQ8 709 aa17.18■□□□□ 0.34
CLK4-211ENST00000522556 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.18■□□□□ 0.34
CLK4-211ENST00000522556 HEATR5BQ9P2D3 2071 aa17.17■□□□□ 0.34
CLK4-211ENST00000522556 FAM95CA0A1B0GW59 222 aa17.17■□□□□ 0.34
CLK4-211ENST00000522556 NDC80O14777 642 aa17.17■□□□□ 0.34
CLK4-211ENST00000522556 CPNE3O75131 537 aaKnown RBP17.17■□□□□ 0.34
CLK4-211ENST00000522556 PRB1P04280 392 aa17.17■□□□□ 0.34
CLK4-211ENST00000522556 MSL3P1P0C860 447 aa17.17■□□□□ 0.34
CLK4-211ENST00000522556 CBSLP0DN79 551 aa17.17■□□□□ 0.34
CLK4-211ENST00000522556 PRKAR1AP10644 381 aa17.17■□□□□ 0.34
CLK4-211ENST00000522556 IMPA1P29218 277 aa17.17■□□□□ 0.34
CLK4-211ENST00000522556 CBSP35520 551 aa17.17■□□□□ 0.34
CLK4-211ENST00000522556 SKIV2L2P42285 1042 aaKnown RBP17.17■□□□□ 0.34
CLK4-211ENST00000522556 PNLIPRP1P54315 467 aa17.17■□□□□ 0.34
CLK4-211ENST00000522556 RPS18P62269 152 aaKnown RBP17.17■□□□□ 0.34
CLK4-211ENST00000522556 PTCHD3Q3KNS1 767 aa17.17■□□□□ 0.34
CLK4-211ENST00000522556 FAM45BPQ6NSW5 357 aa17.17■□□□□ 0.34
CLK4-211ENST00000522556 CEP97Q8IW35 865 aa17.17■□□□□ 0.34
CLK4-211ENST00000522556 TMEM151BQ8IW70 566 aa17.17■□□□□ 0.34
CLK4-211ENST00000522556 PALM2Q8IXS6 379 aa17.17■□□□□ 0.34
CLK4-211ENST00000522556 DTWD1Q8N5C7 304 aa17.17■□□□□ 0.34
CLK4-211ENST00000522556 FAM45AQ8TCE6 357 aa17.17■□□□□ 0.34
CLK4-211ENST00000522556 STARD8Q92502 1023 aa17.17■□□□□ 0.34
CLK4-211ENST00000522556 VPS39Q96JC1 886 aa17.17■□□□□ 0.34
CLK4-211ENST00000522556 TAC3Q9UHF0 121 aa17.17■□□□□ 0.34
CLK4-211ENST00000522556 SH2B3Q9UQQ2 575 aa17.17■□□□□ 0.34
CLK4-211ENST00000522556 PDE10AQ9Y233 779 aa17.17■□□□□ 0.34
CLK4-211ENST00000522556 VWA7Q9Y334 891 aa17.17■□□□□ 0.34
CLK4-211ENST00000522556 PCSK5Q92824 1860 aa17.16■□□□□ 0.34
CLK4-211ENST00000522556 IGKV1-8A0A0C4DH67 115 aa17.16■□□□□ 0.34
CLK4-211ENST00000522556 FAM159BA6NKW6 160 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms