RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 RPL34P49207 117 aaKnown RBP6.97□□□□□ -1.29
SDCBP-208ENST00000520228 TBL3Q12788 808 aaKnown RBP6.97□□□□□ -1.29
SDCBP-208ENST00000520228 AP5B1Q2VPB7 878 aa6.97□□□□□ -1.29
SDCBP-208ENST00000520228 C5orf22Q49AR2 442 aa6.97□□□□□ -1.29
SDCBP-208ENST00000520228 ALFQ53S48 1182 aa6.97□□□□□ -1.29
SDCBP-208ENST00000520228 TAF3Q5VWG9 929 aa6.97□□□□□ -1.29
SDCBP-208ENST00000520228 NAPEPLDQ6IQ20 393 aa6.97□□□□□ -1.29
SDCBP-208ENST00000520228 RHBDF2Q6PJF5 856 aa6.97□□□□□ -1.29
SDCBP-208ENST00000520228 WDTC1Q8N5D0 677 aa6.97□□□□□ -1.29
SDCBP-208ENST00000520228 SCAIQ8N9R8 606 aa6.97□□□□□ -1.29
SDCBP-208ENST00000520228 TMEM35BQ8NCS4 154 aa6.97□□□□□ -1.29
SDCBP-208ENST00000520228 PRSS33Q8NF86 280 aa6.97□□□□□ -1.29
SDCBP-208ENST00000520228 PCSK5Q92824 1860 aa6.97□□□□□ -1.29
SDCBP-208ENST00000520228 RPL36ALQ969Q0 106 aaKnown RBP6.97□□□□□ -1.29
SDCBP-208ENST00000520228 WBP2Q969T9 261 aa6.97□□□□□ -1.29
SDCBP-208ENST00000520228 VOPP1Q96AW1 172 aa6.97□□□□□ -1.29
SDCBP-208ENST00000520228 FAM149B1Q96BN6 582 aa6.97□□□□□ -1.29
SDCBP-208ENST00000520228 PPP1R13BQ96KQ4 1090 aa6.97□□□□□ -1.29
SDCBP-208ENST00000520228 CPXM1Q96SM3 734 aa6.97□□□□□ -1.29
SDCBP-208ENST00000520228 NOTCH4Q99466 2003 aa6.97□□□□□ -1.29
SDCBP-208ENST00000520228 P2RY13Q9BPV8 354 aa6.97□□□□□ -1.29
SDCBP-208ENST00000520228 TRIM62Q9BVG3 475 aa6.97□□□□□ -1.29
SDCBP-208ENST00000520228 DCLK3Q9C098 648 aa6.97□□□□□ -1.29
SDCBP-208ENST00000520228 SYNCQ9H7C4 482 aa6.97□□□□□ -1.29
SDCBP-208ENST00000520228 WASH6PQ9NQA3 447 aa6.97□□□□□ -1.29
SDCBP-208ENST00000520228 MSRB1Q9NZV6 116 aa6.97□□□□□ -1.29
SDCBP-208ENST00000520228 OSGIN2Q9Y236 505 aa6.97□□□□□ -1.29
SDCBP-208ENST00000520228 ZNF510Q9Y2H8 683 aa6.97□□□□□ -1.29
SDCBP-208ENST00000520228 MUC6Q6W4X9 2439 aa6.97□□□□□ -1.29
SDCBP-208ENST00000520228 TRBV5-7A0A0A0MS05 114 aa6.96□□□□□ -1.3
SDCBP-208ENST00000520228 SH2D7A6NKC9 451 aaPredicted RBP6.96□□□□□ -1.3
SDCBP-208ENST00000520228 CAPN9O14815 690 aa6.96□□□□□ -1.3
SDCBP-208ENST00000520228 PAPSS1O43252 624 aaPredicted RBP6.96□□□□□ -1.3
SDCBP-208ENST00000520228 LSM8O95777 96 aaKnown RBP6.96□□□□□ -1.3
SDCBP-208ENST00000520228 KLKB1P03952 638 aa6.96□□□□□ -1.3
SDCBP-208ENST00000520228 CORO1AP31146 461 aaKnown RBP6.96□□□□□ -1.3
SDCBP-208ENST00000520228 HARS2P49590 506 aaKnown RBP6.96□□□□□ -1.3
SDCBP-208ENST00000520228 YWHAZP63104 245 aaKnown RBP6.96□□□□□ -1.3
SDCBP-208ENST00000520228 CDR2Q01850 454 aa6.96□□□□□ -1.3
SDCBP-208ENST00000520228 GAD2Q05329 585 aa6.96□□□□□ -1.3
SDCBP-208ENST00000520228 IL13RA2Q14627 380 aa6.96□□□□□ -1.3
SDCBP-208ENST00000520228 ANGPT1Q15389 498 aa6.96□□□□□ -1.3
SDCBP-208ENST00000520228 SMTNL2Q2TAL5 461 aa6.96□□□□□ -1.3
SDCBP-208ENST00000520228 RETSATQ6NUM9 610 aa6.96□□□□□ -1.3
SDCBP-208ENST00000520228 CACNA2D4Q7Z3S7 1137 aa6.96□□□□□ -1.3
SDCBP-208ENST00000520228 C1QL2Q7Z5L3 287 aa6.96□□□□□ -1.3
SDCBP-208ENST00000520228 ZNF677Q86XU0 584 aa6.96□□□□□ -1.3
SDCBP-208ENST00000520228 TMEM25Q86YD3 366 aa6.96□□□□□ -1.3
SDCBP-208ENST00000520228 C1orf131Q8NDD1 294 aaKnown RBP6.96□□□□□ -1.3
SDCBP-208ENST00000520228 SETD9Q8NE22 299 aa6.96□□□□□ -1.3
SDCBP-208ENST00000520228 HTRA1Q92743 480 aa6.96□□□□□ -1.3
SDCBP-208ENST00000520228 CD101Q93033 1021 aa6.96□□□□□ -1.3
SDCBP-208ENST00000520228 SH3KBP1Q96B97 665 aa6.96□□□□□ -1.3
SDCBP-208ENST00000520228 NAP1L5Q96NT1 182 aaPredicted RBP6.96□□□□□ -1.3
SDCBP-208ENST00000520228 TMEM79Q9BSE2 394 aa6.96□□□□□ -1.3
SDCBP-208ENST00000520228 GPR63Q9BZJ6 419 aa6.96□□□□□ -1.3
SDCBP-208ENST00000520228 TSPY26PQ9H489 355 aa6.96□□□□□ -1.3
SDCBP-208ENST00000520228 FBRSL1Q9HCM7 1045 aaKnown RBP6.96□□□□□ -1.3
SDCBP-208ENST00000520228 SPHK2Q9NRA0 654 aa6.96□□□□□ -1.3
SDCBP-208ENST00000520228 TRNAU1APQ9NX07 287 aaKnown RBP6.96□□□□□ -1.3
SDCBP-208ENST00000520228 WDR35Q9P2L0 1181 aa6.96□□□□□ -1.3
SDCBP-208ENST00000520228 NOCTQ9UK39 431 aaKnown RBP6.96□□□□□ -1.3
SDCBP-208ENST00000520228 SLC13A4Q9UKG4 626 aa6.96□□□□□ -1.3
SDCBP-208ENST00000520228 AGO1Q9UL18 857 aaKnown RBP6.96□□□□□ -1.3
SDCBP-208ENST00000520228 ICKQ9UPZ9 632 aa6.96□□□□□ -1.3
SDCBP-208ENST00000520228 CRYL1Q9Y2S2 319 aa6.96□□□□□ -1.3
SDCBP-208ENST00000520228 HBS1LQ9Y450 684 aaKnown RBP6.96□□□□□ -1.3
SDCBP-208ENST00000520228 DOCK8Q8NF50 2099 aa6.96□□□□□ -1.3
SDCBP-208ENST00000520228 DOCK6Q96HP0 2047 aa6.95□□□□□ -1.3
SDCBP-208ENST00000520228 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.95□□□□□ -1.3
SDCBP-208ENST00000520228 DDAH2O95865 285 aa6.95□□□□□ -1.3
SDCBP-208ENST00000520228 AGR2O95994 175 aa6.95□□□□□ -1.3
SDCBP-208ENST00000520228 EGFP01133 1207 aa6.95□□□□□ -1.3
SDCBP-208ENST00000520228 FYNP06241 537 aa6.95□□□□□ -1.3
SDCBP-208ENST00000520228 CCDC172P0C7W6 258 aa6.95□□□□□ -1.3
SDCBP-208ENST00000520228 CDH5P33151 784 aaPredicted RBP6.95□□□□□ -1.3
SDCBP-208ENST00000520228 OPRD1P41143 372 aa6.95□□□□□ -1.3
SDCBP-208ENST00000520228 MMP13P45452 471 aa6.95□□□□□ -1.3
SDCBP-208ENST00000520228 CXCL12P48061 93 aa6.95□□□□□ -1.3
SDCBP-208ENST00000520228 UBASH3AP57075 661 aa6.95□□□□□ -1.3
SDCBP-208ENST00000520228 CSTF1Q05048 431 aaKnown RBP6.95□□□□□ -1.3
SDCBP-208ENST00000520228 PMPCAQ10713 525 aa6.95□□□□□ -1.3
SDCBP-208ENST00000520228 FBXO43Q4G163 708 aa6.95□□□□□ -1.3
SDCBP-208ENST00000520228 PTPN20Q4JDL3 420 aa6.95□□□□□ -1.3
SDCBP-208ENST00000520228 EFHC1Q5JVL4 640 aa6.95□□□□□ -1.3
SDCBP-208ENST00000520228 NAA35Q5VZE5 725 aa6.95□□□□□ -1.3
SDCBP-208ENST00000520228 OR6B2Q6IFH4 312 aa6.95□□□□□ -1.3
SDCBP-208ENST00000520228 C11orf87Q6NUJ2 197 aa6.95□□□□□ -1.3
SDCBP-208ENST00000520228 Q6ZS52 159 aa6.95□□□□□ -1.3
SDCBP-208ENST00000520228 TPGS1Q6ZTW0 290 aa6.95□□□□□ -1.3
SDCBP-208ENST00000520228 KDELC2Q7Z4H8 507 aa6.95□□□□□ -1.3
SDCBP-208ENST00000520228 ERICH1Q86X53 443 aa6.95□□□□□ -1.3
SDCBP-208ENST00000520228 ZDHHC17Q8IUH5 632 aa6.95□□□□□ -1.3
SDCBP-208ENST00000520228 SPEM1Q8N4L4 309 aa6.95□□□□□ -1.3
SDCBP-208ENST00000520228 MSANTD4Q8NCY6 345 aa6.95□□□□□ -1.3
SDCBP-208ENST00000520228 CCDC26Q8TAB7 109 aa6.95□□□□□ -1.3
SDCBP-208ENST00000520228 DQX1Q8TE96 717 aaKnown RBP6.95□□□□□ -1.3
SDCBP-208ENST00000520228 SLC20A1Q8WUM9 679 aa6.95□□□□□ -1.3
SDCBP-208ENST00000520228 ATOH1Q92858 354 aaPredicted RBP6.95□□□□□ -1.3
SDCBP-208ENST00000520228 BBS2Q9BXC9 721 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms