RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 STT3BQ8TCJ2 826 aa19.42■□□□□ 0.7
SQSTM1-215ENST00000514093 STOX2Q9P2F5 926 aaPredicted RBP19.42■□□□□ 0.7
SQSTM1-215ENST00000514093 C3orf18Q9UK00 162 aa19.42■□□□□ 0.7
SQSTM1-215ENST00000514093 PCNX1Q96RV3 2341 aa19.41■□□□□ 0.7
SQSTM1-215ENST00000514093 NSG1A0A0A6YYJ2 146 aa19.41■□□□□ 0.7
SQSTM1-215ENST00000514093 HACD1B0YJ81 288 aa19.41■□□□□ 0.7
SQSTM1-215ENST00000514093 H7C0C1 242 aa19.41■□□□□ 0.7
SQSTM1-215ENST00000514093 SPOPO43791 374 aa19.41■□□□□ 0.7
SQSTM1-215ENST00000514093 RASAL1O95294 804 aa19.41■□□□□ 0.7
SQSTM1-215ENST00000514093 UQCRHP07919 91 aa19.41■□□□□ 0.7
SQSTM1-215ENST00000514093 PKLRP30613 574 aa19.41■□□□□ 0.7
SQSTM1-215ENST00000514093 SSTR2P30874 369 aa19.41■□□□□ 0.7
SQSTM1-215ENST00000514093 NSG1P42857 185 aa19.41■□□□□ 0.7
SQSTM1-215ENST00000514093 SLC1A1P43005 524 aa19.41■□□□□ 0.7
SQSTM1-215ENST00000514093 ATP5OP48047 213 aa19.41■□□□□ 0.7
SQSTM1-215ENST00000514093 CARSP49589 748 aaKnown RBP19.41■□□□□ 0.7
SQSTM1-215ENST00000514093 PMP22Q01453 160 aa19.41■□□□□ 0.7
SQSTM1-215ENST00000514093 INAQ16352 499 aa19.41■□□□□ 0.7
SQSTM1-215ENST00000514093 SYTL3Q4VX76 610 aa19.41■□□□□ 0.7
SQSTM1-215ENST00000514093 ATG9BQ674R7 924 aa19.41■□□□□ 0.7
SQSTM1-215ENST00000514093 SPNS3Q6ZMD2 512 aa19.41■□□□□ 0.7
SQSTM1-215ENST00000514093 NLRP9Q7RTR0 991 aa19.41■□□□□ 0.7
SQSTM1-215ENST00000514093 LAPTM4BQ86VI4 370 aa19.41■□□□□ 0.7
SQSTM1-215ENST00000514093 TTC29Q8NA56 475 aaPredicted RBP19.41■□□□□ 0.7
SQSTM1-215ENST00000514093 MIEF2Q96C03 454 aa19.41■□□□□ 0.7
SQSTM1-215ENST00000514093 IL17FQ96PD4 163 aa19.41■□□□□ 0.7
SQSTM1-215ENST00000514093 SELENOSQ9BQE4 189 aa19.41■□□□□ 0.7
SQSTM1-215ENST00000514093 ZNF304Q9HCX3 659 aa19.41■□□□□ 0.7
SQSTM1-215ENST00000514093 ABI3Q9P2A4 366 aa19.41■□□□□ 0.7
SQSTM1-215ENST00000514093 IMPACTQ9P2X3 320 aa19.41■□□□□ 0.7
SQSTM1-215ENST00000514093 hCG_1818297A0A087WSY0 165 aa19.4■□□□□ 0.7
SQSTM1-215ENST00000514093 SLC5A10A0PJK1 596 aa19.4■□□□□ 0.7
SQSTM1-215ENST00000514093 AP2A2O94973 939 aa19.4■□□□□ 0.7
SQSTM1-215ENST00000514093 WDPCPO95876 746 aa19.4■□□□□ 0.7
SQSTM1-215ENST00000514093 GSTM1P09488 218 aa19.4■□□□□ 0.7
SQSTM1-215ENST00000514093 ZGLP1P0C6A0 271 aa19.4■□□□□ 0.7
SQSTM1-215ENST00000514093 ESRRAP11474 423 aaPredicted RBP19.4■□□□□ 0.7
SQSTM1-215ENST00000514093 COX6A1P12074 109 aa19.4■□□□□ 0.7
SQSTM1-215ENST00000514093 RAB28P51157 221 aa19.4■□□□□ 0.7
SQSTM1-215ENST00000514093 VSX2P58304 361 aaPredicted RBP19.4■□□□□ 0.7
SQSTM1-215ENST00000514093 GSTM4Q03013 218 aa19.4■□□□□ 0.7
SQSTM1-215ENST00000514093 OCA2Q04671 838 aa19.4■□□□□ 0.7
SQSTM1-215ENST00000514093 EEF1A2Q05639 463 aaKnown RBP19.4■□□□□ 0.7
SQSTM1-215ENST00000514093 C3AR1Q16581 482 aa19.4■□□□□ 0.7
SQSTM1-215ENST00000514093 TFDP3Q5H9I0 405 aa19.4■□□□□ 0.7
SQSTM1-215ENST00000514093 TCTE1Q5JU00 501 aa19.4■□□□□ 0.7
SQSTM1-215ENST00000514093 YOD1Q5VVQ6 348 aaPredicted RBP19.4■□□□□ 0.7
SQSTM1-215ENST00000514093 ITPRIPL1Q6GPH6 555 aa19.4■□□□□ 0.7
SQSTM1-215ENST00000514093 FIGLAQ6QHK4 219 aa19.4■□□□□ 0.7
SQSTM1-215ENST00000514093 NDUFAF7Q7L592 441 aa19.4■□□□□ 0.7
SQSTM1-215ENST00000514093 CDH24Q86UP0 819 aa19.4■□□□□ 0.7
SQSTM1-215ENST00000514093 POM121Q96HA1 1249 aa19.4■□□□□ 0.7
SQSTM1-215ENST00000514093 TBL1YQ9BQ87 522 aa19.4■□□□□ 0.7
SQSTM1-215ENST00000514093 HEMGNQ9BXL5 484 aa19.4■□□□□ 0.7
SQSTM1-215ENST00000514093 TINAGQ9UJW2 476 aa19.4■□□□□ 0.7
SQSTM1-215ENST00000514093 AAR2Q9Y312 384 aaKnown RBP19.4■□□□□ 0.7
SQSTM1-215ENST00000514093 MRPS2Q9Y399 296 aaKnown RBP19.4■□□□□ 0.7
SQSTM1-215ENST00000514093 AKR1B10O60218 316 aa19.39■□□□□ 0.69
SQSTM1-215ENST00000514093 SLC19A2O60779 497 aa19.39■□□□□ 0.69
SQSTM1-215ENST00000514093 CRYABP02511 175 aaKnown RBP19.39■□□□□ 0.69
SQSTM1-215ENST00000514093 TPH1P17752 444 aa19.39■□□□□ 0.69
SQSTM1-215ENST00000514093 RBPJQ06330 500 aa19.39■□□□□ 0.69
SQSTM1-215ENST00000514093 PRPSAP1Q14558 356 aa19.39■□□□□ 0.69
SQSTM1-215ENST00000514093 SF1Q15637 639 aaKnown RBP19.39■□□□□ 0.69
SQSTM1-215ENST00000514093 FAM214AQ32MH5 1076 aa19.39■□□□□ 0.69
SQSTM1-215ENST00000514093 ZC3H12BQ5HYM0 836 aaKnown RBP19.39■□□□□ 0.69
SQSTM1-215ENST00000514093 ANKRD20A2Q5SQ80 823 aa19.39■□□□□ 0.69
SQSTM1-215ENST00000514093 WASHC2DQ5SRD0 308 aa19.39■□□□□ 0.69
SQSTM1-215ENST00000514093 ANKRD20A1Q5TYW2 823 aa19.39■□□□□ 0.69
SQSTM1-215ENST00000514093 ANKRD20A3Q5VUR7 823 aa19.39■□□□□ 0.69
SQSTM1-215ENST00000514093 TMTC1Q8IUR5 882 aa19.39■□□□□ 0.69
SQSTM1-215ENST00000514093 RHOT2Q8IXI1 618 aa19.39■□□□□ 0.69
SQSTM1-215ENST00000514093 MTFMTQ96DP5 389 aaKnown RBP19.39■□□□□ 0.69
SQSTM1-215ENST00000514093 SPTLC3Q9NUV7 552 aa19.39■□□□□ 0.69
SQSTM1-215ENST00000514093 IL1RAPL1Q9NZN1 696 aa19.39■□□□□ 0.69
SQSTM1-215ENST00000514093 ZNF282Q9UDV7 671 aaPredicted RBP19.39■□□□□ 0.69
SQSTM1-215ENST00000514093 HYKKA2RU49 373 aa19.38■□□□□ 0.69
SQSTM1-215ENST00000514093 FFAR3O14843 346 aa19.38■□□□□ 0.69
SQSTM1-215ENST00000514093 GPR42O15529 346 aa19.38■□□□□ 0.69
SQSTM1-215ENST00000514093 KDM1AO60341 852 aa19.38■□□□□ 0.69
SQSTM1-215ENST00000514093 CTSVO60911 334 aa19.38■□□□□ 0.69
SQSTM1-215ENST00000514093 WFS1O76024 890 aa19.38■□□□□ 0.69
SQSTM1-215ENST00000514093 FTH1P02794 183 aa19.38■□□□□ 0.69
SQSTM1-215ENST00000514093 SERPINA7P05543 415 aa19.38■□□□□ 0.69
SQSTM1-215ENST00000514093 CD9P21926 228 aa19.38■□□□□ 0.69
SQSTM1-215ENST00000514093 CASP6P55212 293 aa19.38■□□□□ 0.69
SQSTM1-215ENST00000514093 CACNG1Q06432 222 aa19.38■□□□□ 0.69
SQSTM1-215ENST00000514093 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.38■□□□□ 0.69
SQSTM1-215ENST00000514093 FAAH2Q6GMR7 532 aa19.38■□□□□ 0.69
SQSTM1-215ENST00000514093 FRMPD2BQ6IN97 320 aa19.38■□□□□ 0.69
SQSTM1-215ENST00000514093 HIBCHQ6NVY1 386 aaPredicted RBP19.38■□□□□ 0.69
SQSTM1-215ENST00000514093 NCCRP1Q6ZVX7 275 aaPredicted RBP19.38■□□□□ 0.69
SQSTM1-215ENST00000514093 CEP97Q8IW35 865 aa19.38■□□□□ 0.69
SQSTM1-215ENST00000514093 DNAJB8Q8NHS0 232 aa19.38■□□□□ 0.69
SQSTM1-215ENST00000514093 CFAP61Q8NHU2 1237 aa19.38■□□□□ 0.69
SQSTM1-215ENST00000514093 ADAMTS18Q8TE60 1221 aa19.38■□□□□ 0.69
SQSTM1-215ENST00000514093 IQCDQ96DY2 449 aa19.38■□□□□ 0.69
SQSTM1-215ENST00000514093 CDKN2AIPNLQ96HQ2 116 aa19.38■□□□□ 0.69
SQSTM1-215ENST00000514093 ZNF285Q96NJ3 590 aa19.38■□□□□ 0.69
SQSTM1-215ENST00000514093 MENTQ9BUN1 341 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms