RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 PRSS58Q8IYP2 241 aa10.44□□□□□ -0.74
DDX41-216ENST00000513562 CLDN19Q8N6F1 224 aa10.44□□□□□ -0.74
DDX41-216ENST00000513562 LINC01555Q8NAE3 123 aa10.44□□□□□ -0.74
DDX41-216ENST00000513562 GPR137Q96N19 417 aa10.44□□□□□ -0.74
DDX41-216ENST00000513562 VAT1Q99536 393 aa10.44□□□□□ -0.74
DDX41-216ENST00000513562 C19orf43Q9BQ61 176 aa10.44□□□□□ -0.74
DDX41-216ENST00000513562 SELENOSQ9BQE4 189 aa10.44□□□□□ -0.74
DDX41-216ENST00000513562 TMEM121Q9BTD3 319 aa10.44□□□□□ -0.74
DDX41-216ENST00000513562 ZNF304Q9HCX3 659 aa10.44□□□□□ -0.74
DDX41-216ENST00000513562 LUC7LQ9NQ29 371 aaKnown RBP10.44□□□□□ -0.74
DDX41-216ENST00000513562 RIC8BQ9NVN3 520 aa10.44□□□□□ -0.74
DDX41-216ENST00000513562 SAE1Q9UBE0 346 aaPredicted RBP10.44□□□□□ -0.74
DDX41-216ENST00000513562 TNFRSF10DQ9UBN6 386 aa10.44□□□□□ -0.74
DDX41-216ENST00000513562 ZNF282Q9UDV7 671 aaPredicted RBP10.44□□□□□ -0.74
DDX41-216ENST00000513562 SPG11Q96JI7 2443 aa10.44□□□□□ -0.74
DDX41-216ENST00000513562 NAV3Q8IVL0 2385 aa10.44□□□□□ -0.74
DDX41-216ENST00000513562 IGHV1-45A0A0A0MS14 117 aa10.43□□□□□ -0.74
DDX41-216ENST00000513562 KDM1AO60341 852 aa10.43□□□□□ -0.74
DDX41-216ENST00000513562 WFS1O76024 890 aa10.43□□□□□ -0.74
DDX41-216ENST00000513562 AP2A2O94973 939 aa10.43□□□□□ -0.74
DDX41-216ENST00000513562 KRT1P04264 644 aa10.43□□□□□ -0.74
DDX41-216ENST00000513562 UQCRHP07919 91 aa10.43□□□□□ -0.74
DDX41-216ENST00000513562 PECAM1P16284 738 aaPredicted RBP10.43□□□□□ -0.74
DDX41-216ENST00000513562 IGFBP2P18065 325 aa10.43□□□□□ -0.74
DDX41-216ENST00000513562 MC4RP32245 332 aa10.43□□□□□ -0.74
DDX41-216ENST00000513562 CDKN1CP49918 316 aaPredicted RBP10.43□□□□□ -0.74
DDX41-216ENST00000513562 EEF1A2Q05639 463 aaKnown RBP10.43□□□□□ -0.74
DDX41-216ENST00000513562 MSLNQ13421 630 aaPredicted RBP10.43□□□□□ -0.74
DDX41-216ENST00000513562 NFKBIBQ15653 356 aa10.43□□□□□ -0.74
DDX41-216ENST00000513562 FILIP1LQ4L180 1135 aa10.43□□□□□ -0.74
DDX41-216ENST00000513562 KRTCAP3Q53RY4 240 aa10.43□□□□□ -0.74
DDX41-216ENST00000513562 TFDP3Q5H9I0 405 aa10.43□□□□□ -0.74
DDX41-216ENST00000513562 ZC3H12BQ5HYM0 836 aaKnown RBP10.43□□□□□ -0.74
DDX41-216ENST00000513562 PRMT9Q6P2P2 845 aa10.43□□□□□ -0.74
DDX41-216ENST00000513562 SASS6Q6UVJ0 657 aa10.43□□□□□ -0.74
DDX41-216ENST00000513562 RANBP10Q6VN20 620 aa10.43□□□□□ -0.74
DDX41-216ENST00000513562 PID1Q7Z2X4 250 aa10.43□□□□□ -0.74
DDX41-216ENST00000513562 SERPINA9Q86WD7 417 aa10.43□□□□□ -0.74
DDX41-216ENST00000513562 PHF10Q8WUB8 498 aaKnown RBP10.43□□□□□ -0.74
DDX41-216ENST00000513562 GORASP1Q9BQQ3 440 aa10.43□□□□□ -0.74
DDX41-216ENST00000513562 MENTQ9BUN1 341 aa10.43□□□□□ -0.74
DDX41-216ENST00000513562 CXXC4Q9H2H0 198 aa10.43□□□□□ -0.74
DDX41-216ENST00000513562 RSPH14Q9UHP6 348 aa10.43□□□□□ -0.74
DDX41-216ENST00000513562 GTF3C3Q9Y5Q9 886 aa10.43□□□□□ -0.74
DDX41-216ENST00000513562 MDC1Q14676 2089 aaKnown RBP10.43□□□□□ -0.74
DDX41-216ENST00000513562 SVILO95425 2214 aa10.42□□□□□ -0.74
DDX41-216ENST00000513562 A0A1B0GTH6 734 aa10.42□□□□□ -0.74
DDX41-216ENST00000513562 HYKKA2RU49 373 aa10.42□□□□□ -0.74
DDX41-216ENST00000513562 IDSB3KWA1 339 aa10.42□□□□□ -0.74
DDX41-216ENST00000513562 BHMG1C9JSJ3 638 aaPredicted RBP10.42□□□□□ -0.74
DDX41-216ENST00000513562 CCL22O00626 93 aa10.42□□□□□ -0.74
DDX41-216ENST00000513562 CRTAMO95727 393 aa10.42□□□□□ -0.74
DDX41-216ENST00000513562 MLYCDO95822 493 aa10.42□□□□□ -0.74
DDX41-216ENST00000513562 H2AFZP0C0S5 128 aa10.42□□□□□ -0.74
DDX41-216ENST00000513562 ITGAMP11215 1152 aa10.42□□□□□ -0.74
DDX41-216ENST00000513562 DRD2P14416 443 aa10.42□□□□□ -0.74
DDX41-216ENST00000513562 CXCR2P25025 360 aa10.42□□□□□ -0.74
DDX41-216ENST00000513562 ADRA1AP35348 466 aa10.42□□□□□ -0.74
DDX41-216ENST00000513562 GRIA3P42263 894 aa10.42□□□□□ -0.74
DDX41-216ENST00000513562 GEMP55040 296 aa10.42□□□□□ -0.74
DDX41-216ENST00000513562 AP2B1P63010 937 aa10.42□□□□□ -0.74
DDX41-216ENST00000513562 MESDQ14696 234 aa10.42□□□□□ -0.74
DDX41-216ENST00000513562 ZNF766Q5HY98 468 aa10.42□□□□□ -0.74
DDX41-216ENST00000513562 ABHD17BQ5VST6 288 aa10.42□□□□□ -0.74
DDX41-216ENST00000513562 LRRC38Q5VT99 294 aa10.42□□□□□ -0.74
DDX41-216ENST00000513562 MFSD7Q6UXD7 560 aa10.42□□□□□ -0.74
DDX41-216ENST00000513562 ARHGEF18Q6ZSZ5 1173 aa10.42□□□□□ -0.74
DDX41-216ENST00000513562 NEK10Q6ZWH5 1172 aa10.42□□□□□ -0.74
DDX41-216ENST00000513562 H2AFVQ71UI9 128 aa10.42□□□□□ -0.74
DDX41-216ENST00000513562 LAPTM4BQ86VI4 370 aa10.42□□□□□ -0.74
DDX41-216ENST00000513562 TGIF2LYQ8IUE0 185 aa10.42□□□□□ -0.74
DDX41-216ENST00000513562 CA5BP1Q8WTZ4 195 aa10.42□□□□□ -0.74
DDX41-216ENST00000513562 CTNNBL1Q8WYA6 563 aaPredicted RBP10.42□□□□□ -0.74
DDX41-216ENST00000513562 RNF25Q96BH1 459 aaPredicted RBP10.42□□□□□ -0.74
DDX41-216ENST00000513562 SLC22A18Q96BI1 424 aa10.42□□□□□ -0.74
DDX41-216ENST00000513562 NAP1L5Q96NT1 182 aaPredicted RBP10.42□□□□□ -0.74
DDX41-216ENST00000513562 DMRTA2Q96SC8 542 aa10.42□□□□□ -0.74
DDX41-216ENST00000513562 GBA3Q9H227 469 aa10.42□□□□□ -0.74
DDX41-216ENST00000513562 INTS7Q9NVH2 962 aaKnown RBP10.42□□□□□ -0.74
DDX41-216ENST00000513562 CHMP5Q9NZZ3 219 aa10.42□□□□□ -0.74
DDX41-216ENST00000513562 TRHDEQ9UKU6 1024 aa10.42□□□□□ -0.74
DDX41-216ENST00000513562 PCDHGB6Q9Y5F9 930 aa10.42□□□□□ -0.74
DDX41-216ENST00000513562 MYO7BQ6PIF6 2116 aa10.42□□□□□ -0.74
DDX41-216ENST00000513562 NCOA6Q14686 2063 aaPredicted RBP10.42□□□□□ -0.74
DDX41-216ENST00000513562 LOC102723996A0A087X1L8 192 aa10.41□□□□□ -0.74
DDX41-216ENST00000513562 SLC5A10A0PJK1 596 aa10.41□□□□□ -0.74
DDX41-216ENST00000513562 ASPDHA6ND91 283 aa10.41□□□□□ -0.74
DDX41-216ENST00000513562 E9PLN8 166 aa10.41□□□□□ -0.74
DDX41-216ENST00000513562 H7C0S8 307 aa10.41□□□□□ -0.74
DDX41-216ENST00000513562 QSOX1O00391 747 aa10.41□□□□□ -0.74
DDX41-216ENST00000513562 ADAM10O14672 748 aa10.41□□□□□ -0.74
DDX41-216ENST00000513562 SRPX2O60687 465 aaPredicted RBP10.41□□□□□ -0.74
DDX41-216ENST00000513562 CTSVO60911 334 aa10.41□□□□□ -0.74
DDX41-216ENST00000513562 S1PR4O95977 384 aa10.41□□□□□ -0.74
DDX41-216ENST00000513562 PRSS56P0CW18 603 aa10.41□□□□□ -0.74
DDX41-216ENST00000513562 DNAJA1P31689 397 aaKnown RBP10.41□□□□□ -0.74
DDX41-216ENST00000513562 CDKN2BP42772 138 aa10.41□□□□□ -0.74
DDX41-216ENST00000513562 EMP2P54851 167 aa10.41□□□□□ -0.74
DDX41-216ENST00000513562 VSX2P58304 361 aaPredicted RBP10.41□□□□□ -0.74
DDX41-216ENST00000513562 PLOD1Q02809 727 aaPredicted RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms