RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 OR4K2Q8NGD2 314 aa13.34□□□□□ -0.27
SPCS3-204ENST00000513139 TFB1MQ8WVM0 346 aaKnown RBP13.34□□□□□ -0.27
SPCS3-204ENST00000513139 FSD1LQ9BXM9 530 aa13.34□□□□□ -0.27
SPCS3-204ENST00000513139 ENAMQ9NRM1 1142 aa13.34□□□□□ -0.27
SPCS3-204ENST00000513139 SPHK1Q9NYA1 384 aa13.34□□□□□ -0.27
SPCS3-204ENST00000513139 POLG2Q9UHN1 485 aa13.34□□□□□ -0.27
SPCS3-204ENST00000513139 PPP2R2CQ9Y2T4 447 aa13.34□□□□□ -0.27
SPCS3-204ENST00000513139 VSTM2BA6NLU5 285 aa13.33□□□□□ -0.28
SPCS3-204ENST00000513139 BTNL10A8MVZ5 291 aa13.33□□□□□ -0.28
SPCS3-204ENST00000513139 CCDC175P0C221 793 aa13.33□□□□□ -0.28
SPCS3-204ENST00000513139 COMTP21964 271 aa13.33□□□□□ -0.28
SPCS3-204ENST00000513139 FDXRP22570 491 aa13.33□□□□□ -0.28
SPCS3-204ENST00000513139 SMSP52788 366 aa13.33□□□□□ -0.28
SPCS3-204ENST00000513139 HADHBP55084 474 aaKnown RBP13.33□□□□□ -0.28
SPCS3-204ENST00000513139 CASP6P55212 293 aa13.33□□□□□ -0.28
SPCS3-204ENST00000513139 LSM11P83369 360 aaKnown RBP eCLIP13.33□□□□□ -0.28
SPCS3-204ENST00000513139 KIR2DS3Q14952 304 aa13.33□□□□□ -0.28
SPCS3-204ENST00000513139 GPR33Q49SQ1 333 aa13.33□□□□□ -0.28
SPCS3-204ENST00000513139 SNX20Q7Z614 316 aa13.33□□□□□ -0.28
SPCS3-204ENST00000513139 KBTBD2Q8IY47 623 aa13.33□□□□□ -0.28
SPCS3-204ENST00000513139 TBC1D21Q8IYX1 336 aa13.33□□□□□ -0.28
SPCS3-204ENST00000513139 SEC14L3Q9UDX4 400 aa13.33□□□□□ -0.28
SPCS3-204ENST00000513139 FKBPLQ9UIM3 349 aa13.33□□□□□ -0.28
SPCS3-204ENST00000513139 PYCARDQ9ULZ3 195 aa13.33□□□□□ -0.28
SPCS3-204ENST00000513139 GUCA1BQ9UMX6 200 aa13.33□□□□□ -0.28
SPCS3-204ENST00000513139 ALG6Q9Y672 507 aa13.33□□□□□ -0.28
SPCS3-204ENST00000513139 KDM1AO60341 852 aa13.32□□□□□ -0.28
SPCS3-204ENST00000513139 TNNT1P13805 278 aa13.32□□□□□ -0.28
SPCS3-204ENST00000513139 ACPPP15309 386 aa13.32□□□□□ -0.28
SPCS3-204ENST00000513139 CD1EP15812 388 aa13.32□□□□□ -0.28
SPCS3-204ENST00000513139 ITGALP20701 1170 aa13.32□□□□□ -0.28
SPCS3-204ENST00000513139 SOX11P35716 441 aa13.32□□□□□ -0.28
SPCS3-204ENST00000513139 CARSP49589 748 aaKnown RBP13.32□□□□□ -0.28
SPCS3-204ENST00000513139 KRTAP10-9P60411 292 aa13.32□□□□□ -0.28
SPCS3-204ENST00000513139 ADORA2A-AS1P86434 159 aa13.32□□□□□ -0.28
SPCS3-204ENST00000513139 PID1Q7Z2X4 250 aa13.32□□□□□ -0.28
SPCS3-204ENST00000513139 RFX6Q8HWS3 928 aa13.32□□□□□ -0.28
SPCS3-204ENST00000513139 MCATQ8IVS2 390 aaKnown RBP13.32□□□□□ -0.28
SPCS3-204ENST00000513139 ZNF567Q8N184 647 aa13.32□□□□□ -0.28
SPCS3-204ENST00000513139 OR5AR1Q8NGP9 310 aa13.32□□□□□ -0.28
SPCS3-204ENST00000513139 CCDC110Q8TBZ0 833 aa13.32□□□□□ -0.28
SPCS3-204ENST00000513139 PSMF1Q92530 271 aa13.32□□□□□ -0.28
SPCS3-204ENST00000513139 MTFMTQ96DP5 389 aaKnown RBP13.32□□□□□ -0.28
SPCS3-204ENST00000513139 SPOCK3Q9BQ16 436 aa13.32□□□□□ -0.28
SPCS3-204ENST00000513139 RNF32Q9H0A6 362 aa13.32□□□□□ -0.28
SPCS3-204ENST00000513139 SOX17Q9H6I2 414 aaPredicted RBP13.32□□□□□ -0.28
SPCS3-204ENST00000513139 LZTFL1Q9NQ48 299 aa13.32□□□□□ -0.28
SPCS3-204ENST00000513139 CUTCQ9NTM9 273 aa13.32□□□□□ -0.28
SPCS3-204ENST00000513139 ZDHHC3Q9NYG2 299 aa13.32□□□□□ -0.28
SPCS3-204ENST00000513139 KLHL8Q9P2G9 620 aaPredicted RBP13.32□□□□□ -0.28
SPCS3-204ENST00000513139 CTSFQ9UBX1 484 aa13.32□□□□□ -0.28
SPCS3-204ENST00000513139 ASF1AQ9Y294 204 aa13.32□□□□□ -0.28
SPCS3-204ENST00000513139 GRID2IPA4D2P6 1211 aa13.31□□□□□ -0.28
SPCS3-204ENST00000513139 LIN7AO14910 233 aaPredicted RBP13.31□□□□□ -0.28
SPCS3-204ENST00000513139 SLC19A2O60779 497 aa13.31□□□□□ -0.28
SPCS3-204ENST00000513139 RASAL1O95294 804 aa13.31□□□□□ -0.28
SPCS3-204ENST00000513139 CLDN14O95500 239 aa13.31□□□□□ -0.28
SPCS3-204ENST00000513139 CRTAMO95727 393 aa13.31□□□□□ -0.28
SPCS3-204ENST00000513139 MYBL2P10244 700 aa13.31□□□□□ -0.28
SPCS3-204ENST00000513139 MST1P26927 711 aa13.31□□□□□ -0.28
SPCS3-204ENST00000513139 ACADLP28330 430 aa13.31□□□□□ -0.28
SPCS3-204ENST00000513139 DYNLT1P63172 113 aa13.31□□□□□ -0.28
SPCS3-204ENST00000513139 GRM7Q14831 915 aa13.31□□□□□ -0.28
SPCS3-204ENST00000513139 FAM214AQ32MH5 1076 aa13.31□□□□□ -0.28
SPCS3-204ENST00000513139 TCTE1Q5JU00 501 aa13.31□□□□□ -0.28
SPCS3-204ENST00000513139 LRRC38Q5VT99 294 aa13.31□□□□□ -0.28
SPCS3-204ENST00000513139 ATG9BQ674R7 924 aa13.31□□□□□ -0.28
SPCS3-204ENST00000513139 SHISA6Q6ZSJ9 500 aa13.31□□□□□ -0.28
SPCS3-204ENST00000513139 FAM20CQ8IXL6 584 aa13.31□□□□□ -0.28
SPCS3-204ENST00000513139 TXLNBQ8N3L3 684 aa13.31□□□□□ -0.28
SPCS3-204ENST00000513139 OR5K2Q8NHB8 316 aa13.31□□□□□ -0.28
SPCS3-204ENST00000513139 CHTF18Q8WVB6 975 aa13.31□□□□□ -0.28
SPCS3-204ENST00000513139 CRB3Q9BUF7 120 aa13.31□□□□□ -0.28
SPCS3-204ENST00000513139 MCCC2Q9HCC0 563 aa13.31□□□□□ -0.28
SPCS3-204ENST00000513139 ZNF160Q9HCG1 818 aa13.31□□□□□ -0.28
SPCS3-204ENST00000513139 TRHDEQ9UKU6 1024 aa13.31□□□□□ -0.28
SPCS3-204ENST00000513139 MRPS2Q9Y399 296 aaKnown RBP13.31□□□□□ -0.28
SPCS3-204ENST00000513139 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.31□□□□□ -0.28
SPCS3-204ENST00000513139 INTS1Q8N201 2190 aaKnown RBP13.31□□□□□ -0.28
SPCS3-204ENST00000513139 TRBV5-4A0A0C4DH59 114 aa13.3□□□□□ -0.28
SPCS3-204ENST00000513139 A0A1W2PQ72 361 aa13.3□□□□□ -0.28
SPCS3-204ENST00000513139 ISM1B1AKI9 464 aa13.3□□□□□ -0.28
SPCS3-204ENST00000513139 MAP2K7O14733 419 aa13.3□□□□□ -0.28
SPCS3-204ENST00000513139 SPOPO43791 374 aa13.3□□□□□ -0.28
SPCS3-204ENST00000513139 ANXA9O76027 345 aa13.3□□□□□ -0.28
SPCS3-204ENST00000513139 AP2A1O95782 977 aa13.3□□□□□ -0.28
SPCS3-204ENST00000513139 AGTP01019 485 aa13.3□□□□□ -0.28
SPCS3-204ENST00000513139 PRR35P0CG20 571 aa13.3□□□□□ -0.28
SPCS3-204ENST00000513139 TPBGLP0DKB5 382 aa13.3□□□□□ -0.28
SPCS3-204ENST00000513139 ESRRAP11474 423 aaPredicted RBP13.3□□□□□ -0.28
SPCS3-204ENST00000513139 MAGP20916 626 aa13.3□□□□□ -0.28
SPCS3-204ENST00000513139 KIR3DL1P43629 444 aa13.3□□□□□ -0.28
SPCS3-204ENST00000513139 TFDP2Q14188 446 aa13.3□□□□□ -0.28
SPCS3-204ENST00000513139 ODF2Q5BJF6 829 aa13.3□□□□□ -0.28
SPCS3-204ENST00000513139 ZC3H12BQ5HYM0 836 aaKnown RBP13.3□□□□□ -0.28
SPCS3-204ENST00000513139 RANBP10Q6VN20 620 aa13.3□□□□□ -0.28
SPCS3-204ENST00000513139 NDUFAF7Q7L592 441 aa13.3□□□□□ -0.28
SPCS3-204ENST00000513139 NLRP9Q7RTR0 991 aa13.3□□□□□ -0.28
SPCS3-204ENST00000513139 LAPTM4BQ86VI4 370 aa13.3□□□□□ -0.28
SPCS3-204ENST00000513139 CEP97Q8IW35 865 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms