RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 GPR180Q86V85 440 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 ECHDC2Q86YB7 292 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 NUP43Q8NFH3 380 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 ST8SIA2Q92186 375 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 TOP1MTQ969P6 601 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 HAVCR1Q96D42 359 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 CDKN2AIPNLQ96HQ2 116 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 SPATA33Q96N06 139 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 CHP1Q99653 195 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 RTP3Q9BQQ7 232 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 UPF3BQ9BZI7 483 aaKnown RBP6.04□□□□□ -1.44
CHD1-208ENST00000512392 SHCBP1LQ9BZQ2 653 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 SIK2Q9H0K1 926 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 UPF2Q9HAU5 1272 aaKnown RBP6.04□□□□□ -1.44
CHD1-208ENST00000512392 MAGEF1Q9HAY2 307 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 NTN4Q9HB63 628 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 MBD2Q9UBB5 411 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 NDRG4Q9ULP0 352 aaKnown RBP6.04□□□□□ -1.44
CHD1-208ENST00000512392 IFT52Q9Y366 437 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 RHBDD3Q9Y3P4 386 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 TAF6LQ9Y6J9 622 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 SF3B1O75533 1304 aaKnown RBP eCLIP6.03□□□□□ -1.44
CHD1-208ENST00000512392 FAM90A10PA6NDY2 464 aa6.03□□□□□ -1.44
CHD1-208ENST00000512392 CXorf49A8MYA2 514 aaPredicted RBP6.03□□□□□ -1.44
CHD1-208ENST00000512392 GOLGA8MH3BSY2 632 aa6.03□□□□□ -1.44
CHD1-208ENST00000512392 TEX46H3BTG2 121 aa6.03□□□□□ -1.44
CHD1-208ENST00000512392 OGG1O15527 345 aa6.03□□□□□ -1.44
CHD1-208ENST00000512392 TRAPPC3O43617 180 aa6.03□□□□□ -1.44
CHD1-208ENST00000512392 TRIM13O60858 407 aa6.03□□□□□ -1.44
CHD1-208ENST00000512392 ATXN1LP0C7T5 689 aaKnown RBP6.03□□□□□ -1.44
CHD1-208ENST00000512392 PLA2G4BP0C869 781 aa6.03□□□□□ -1.44
CHD1-208ENST00000512392 SLC6A2P23975 617 aa6.03□□□□□ -1.44
CHD1-208ENST00000512392 CORO7P57737 925 aa6.03□□□□□ -1.44
CHD1-208ENST00000512392 YWHAEP62258 255 aaKnown RBP6.03□□□□□ -1.44
CHD1-208ENST00000512392 TLE3Q04726 772 aa6.03□□□□□ -1.44
CHD1-208ENST00000512392 PON2Q15165 354 aa6.03□□□□□ -1.44
CHD1-208ENST00000512392 EDRF1Q3B7T1 1238 aa6.03□□□□□ -1.44
CHD1-208ENST00000512392 PLEKHO1Q53GL0 409 aaPredicted RBP6.03□□□□□ -1.44
CHD1-208ENST00000512392 DCAF6Q58WW2 860 aa6.03□□□□□ -1.44
CHD1-208ENST00000512392 PAGE2BQ5JRK9 111 aa6.03□□□□□ -1.44
CHD1-208ENST00000512392 LRRC73Q5JTD7 316 aa6.03□□□□□ -1.44
CHD1-208ENST00000512392 PRAMEF5Q5TYX0 476 aa6.03□□□□□ -1.44
CHD1-208ENST00000512392 PRAMEF6Q5VXH4 476 aa6.03□□□□□ -1.44
CHD1-208ENST00000512392 PTRHD1Q6GMV3 140 aaKnown RBP6.03□□□□□ -1.44
CHD1-208ENST00000512392 SLC25A25Q6KCM7 469 aa6.03□□□□□ -1.44
CHD1-208ENST00000512392 TEPPQ6URK8 271 aa6.03□□□□□ -1.44
CHD1-208ENST00000512392 TRMT10CQ7L0Y3 403 aaKnown RBP6.03□□□□□ -1.44
CHD1-208ENST00000512392 NDUFAF7Q7L592 441 aa6.03□□□□□ -1.44
CHD1-208ENST00000512392 DET1Q7L5Y6 550 aa6.03□□□□□ -1.44
CHD1-208ENST00000512392 SPRED1Q7Z699 444 aa6.03□□□□□ -1.44
CHD1-208ENST00000512392 NLGN4YQ8NFZ3 816 aaPredicted RBP6.03□□□□□ -1.44
CHD1-208ENST00000512392 OR14L1PQ8NHC6 308 aa6.03□□□□□ -1.44
CHD1-208ENST00000512392 ANGPTL6Q8NI99 470 aa6.03□□□□□ -1.44
CHD1-208ENST00000512392 PAQR8Q8TEZ7 354 aa6.03□□□□□ -1.44
CHD1-208ENST00000512392 MITD1Q8WV92 249 aa6.03□□□□□ -1.44
CHD1-208ENST00000512392 CPA5Q8WXQ8 436 aa6.03□□□□□ -1.44
CHD1-208ENST00000512392 FAM168AQ92567 244 aa6.03□□□□□ -1.44
CHD1-208ENST00000512392 SLCO4A1Q96BD0 722 aa6.03□□□□□ -1.44
CHD1-208ENST00000512392 REPS1Q96D71 796 aa6.03□□□□□ -1.44
CHD1-208ENST00000512392 RPL10LQ96L21 214 aaKnown RBP6.03□□□□□ -1.44
CHD1-208ENST00000512392 APOLD1Q96LR9 279 aa6.03□□□□□ -1.44
CHD1-208ENST00000512392 CCNL2Q96S94 520 aaPredicted RBP6.03□□□□□ -1.44
CHD1-208ENST00000512392 TSG101Q99816 390 aa6.03□□□□□ -1.44
CHD1-208ENST00000512392 SPAG8Q99932 426 aaPredicted RBP6.03□□□□□ -1.44
CHD1-208ENST00000512392 PRRG3Q9BZD7 231 aa6.03□□□□□ -1.44
CHD1-208ENST00000512392 KATNBL1Q9H079 304 aa6.03□□□□□ -1.44
CHD1-208ENST00000512392 TMEM245Q9H330 911 aa6.03□□□□□ -1.44
CHD1-208ENST00000512392 FN3KQ9H479 309 aa6.03□□□□□ -1.44
CHD1-208ENST00000512392 RGCCQ9H4X1 137 aa6.03□□□□□ -1.44
CHD1-208ENST00000512392 GEMIN7Q9H840 131 aaKnown RBP6.03□□□□□ -1.44
CHD1-208ENST00000512392 HHATLQ9HCP6 504 aa6.03□□□□□ -1.44
CHD1-208ENST00000512392 ERVK-18Q9QC07 812 aa6.03□□□□□ -1.44
CHD1-208ENST00000512392 COPG2Q9UBF2 871 aa6.03□□□□□ -1.44
CHD1-208ENST00000512392 GPR160Q9UJ42 338 aa6.03□□□□□ -1.44
CHD1-208ENST00000512392 FOXA2Q9Y261 457 aaPredicted RBP6.03□□□□□ -1.44
CHD1-208ENST00000512392 REXO2Q9Y3B8 237 aaKnown RBP6.03□□□□□ -1.44
CHD1-208ENST00000512392 BZW2Q9Y6E2 419 aaKnown RBP6.03□□□□□ -1.44
CHD1-208ENST00000512392 FER1L4A9Z1Z3 1794 aa6.02□□□□□ -1.45
CHD1-208ENST00000512392 TRAV25A0A0B4J276 109 aa6.02□□□□□ -1.45
CHD1-208ENST00000512392 TMEM120BA0PK00 339 aa6.02□□□□□ -1.45
CHD1-208ENST00000512392 SLC22A2O15244 555 aa6.02□□□□□ -1.45
CHD1-208ENST00000512392 OR4F21O95013 312 aa6.02□□□□□ -1.45
CHD1-208ENST00000512392 VNN1O95497 513 aa6.02□□□□□ -1.45
CHD1-208ENST00000512392 MBP02144 154 aa6.02□□□□□ -1.45
CHD1-208ENST00000512392 MT-ND1P03886 318 aa6.02□□□□□ -1.45
CHD1-208ENST00000512392 CYP2C8P10632 490 aa6.02□□□□□ -1.45
CHD1-208ENST00000512392 SLC2A3P11169 496 aa6.02□□□□□ -1.45
CHD1-208ENST00000512392 B4GALT1P15291 398 aa6.02□□□□□ -1.45
CHD1-208ENST00000512392 GJA1P17302 382 aa6.02□□□□□ -1.45
CHD1-208ENST00000512392 UGT1A1P22309 533 aa6.02□□□□□ -1.45
CHD1-208ENST00000512392 LRPAP1P30533 357 aa6.02□□□□□ -1.45
CHD1-208ENST00000512392 POLR2LP62875 67 aaKnown RBP6.02□□□□□ -1.45
CHD1-208ENST00000512392 HSD11B2P80365 405 aa6.02□□□□□ -1.45
CHD1-208ENST00000512392 PPP2R2BQ00005 443 aa6.02□□□□□ -1.45
CHD1-208ENST00000512392 SKIDA1Q1XH10 827 aa6.02□□□□□ -1.45
CHD1-208ENST00000512392 PCID2Q5JVF3 399 aa6.02□□□□□ -1.45
CHD1-208ENST00000512392 SCYL2Q6P3W7 929 aa6.02□□□□□ -1.45
CHD1-208ENST00000512392 TMEM108Q6UXF1 575 aa6.02□□□□□ -1.45
CHD1-208ENST00000512392 PAQR9Q6ZVX9 377 aa6.02□□□□□ -1.45
CHD1-208ENST00000512392 FAM131BQ86XD5 332 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms