RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 ADRA2CP18825 462 aa2.93□□□□□ -1.94
CHD1-207ENST00000511628 JAK1P23458 1154 aa2.93□□□□□ -1.94
CHD1-207ENST00000511628 PTGER4P35408 488 aa2.93□□□□□ -1.94
CHD1-207ENST00000511628 GMPSP49915 693 aaPredicted RBP2.93□□□□□ -1.94
CHD1-207ENST00000511628 CAPZA1P52907 286 aa2.93□□□□□ -1.94
CHD1-207ENST00000511628 PTENP60484 403 aa2.93□□□□□ -1.94
CHD1-207ENST00000511628 CX3CL1P78423 397 aa2.93□□□□□ -1.94
CHD1-207ENST00000511628 PRKCZQ05513 592 aa2.93□□□□□ -1.94
CHD1-207ENST00000511628 MFAP5Q13361 173 aa2.93□□□□□ -1.94
CHD1-207ENST00000511628 ITGA7Q13683 1181 aa2.93□□□□□ -1.94
CHD1-207ENST00000511628 UGP2Q16851 508 aa2.93□□□□□ -1.94
CHD1-207ENST00000511628 TCTE1Q5JU00 501 aa2.93□□□□□ -1.94
CHD1-207ENST00000511628 C6orf136Q5SQH8 315 aa2.93□□□□□ -1.94
CHD1-207ENST00000511628 LINGO4Q6UY18 593 aa2.93□□□□□ -1.94
CHD1-207ENST00000511628 DET1Q7L5Y6 550 aa2.93□□□□□ -1.94
CHD1-207ENST00000511628 CFAP206Q8IYR0 622 aa2.93□□□□□ -1.94
CHD1-207ENST00000511628 BMPERQ8N8U9 685 aa2.93□□□□□ -1.94
CHD1-207ENST00000511628 ZNF485Q8NCK3 441 aa2.93□□□□□ -1.94
CHD1-207ENST00000511628 NPEPL1Q8NDH3 523 aa2.93□□□□□ -1.94
CHD1-207ENST00000511628 OR11H4Q8NGC9 324 aa2.93□□□□□ -1.94
CHD1-207ENST00000511628 SETD6Q8TBK2 473 aa2.93□□□□□ -1.94
CHD1-207ENST00000511628 SSMEM1Q8WWF3 244 aa2.93□□□□□ -1.94
CHD1-207ENST00000511628 ATP6V1E2Q96A05 226 aa2.93□□□□□ -1.94
CHD1-207ENST00000511628 MOB3AQ96BX8 217 aa2.93□□□□□ -1.94
CHD1-207ENST00000511628 ABHD8Q96I13 439 aa2.93□□□□□ -1.94
CHD1-207ENST00000511628 SPATA33Q96N06 139 aa2.93□□□□□ -1.94
CHD1-207ENST00000511628 RAD9AQ99638 391 aa2.93□□□□□ -1.94
CHD1-207ENST00000511628 CITED2Q99967 270 aaPredicted RBP2.93□□□□□ -1.94
CHD1-207ENST00000511628 TRAF4Q9BUZ4 470 aaPredicted RBP2.93□□□□□ -1.94
CHD1-207ENST00000511628 SLC2A11Q9BYW1 496 aa2.93□□□□□ -1.94
CHD1-207ENST00000511628 S1PR5Q9H228 398 aa2.93□□□□□ -1.94
CHD1-207ENST00000511628 A4GALTQ9NPC4 353 aa2.93□□□□□ -1.94
CHD1-207ENST00000511628 PFDN4Q9NQP4 134 aa2.93□□□□□ -1.94
CHD1-207ENST00000511628 SERINC1Q9NRX5 453 aa2.93□□□□□ -1.94
CHD1-207ENST00000511628 ZNF701Q9NV72 531 aaPredicted RBP2.93□□□□□ -1.94
CHD1-207ENST00000511628 SLC38A7Q9NVC3 462 aa2.93□□□□□ -1.94
CHD1-207ENST00000511628 POLLQ9UGP5 575 aa2.93□□□□□ -1.94
CHD1-207ENST00000511628 CPSF3Q9UKF6 684 aaKnown RBP2.93□□□□□ -1.94
CHD1-207ENST00000511628 TMED3Q9Y3Q3 217 aa2.93□□□□□ -1.94
CHD1-207ENST00000511628 C2CD2Q9Y426 696 aa2.93□□□□□ -1.94
CHD1-207ENST00000511628 NME7Q9Y5B8 376 aa2.93□□□□□ -1.94
CHD1-207ENST00000511628 ZFP37Q9Y6Q3 630 aaPredicted RBP2.93□□□□□ -1.94
CHD1-207ENST00000511628 A0A087WV48 116 aa2.92□□□□□ -1.94
CHD1-207ENST00000511628 A0A1W2PPI3 338 aa2.92□□□□□ -1.94
CHD1-207ENST00000511628 A4D1N5 150 aa2.92□□□□□ -1.94
CHD1-207ENST00000511628 HHLA1C9JL84 531 aa2.92□□□□□ -1.94
CHD1-207ENST00000511628 PI4K2BG5E9Z4 385 aa2.92□□□□□ -1.94
CHD1-207ENST00000511628 H0YAE9 185 aa2.92□□□□□ -1.94
CHD1-207ENST00000511628 PDE9AO76083 593 aa2.92□□□□□ -1.94
CHD1-207ENST00000511628 TBX6O95947 436 aaPredicted RBP2.92□□□□□ -1.94
CHD1-207ENST00000511628 LBPP18428 481 aa2.92□□□□□ -1.94
CHD1-207ENST00000511628 GNAZP19086 355 aa2.92□□□□□ -1.94
CHD1-207ENST00000511628 MSH3P20585 1137 aa2.92□□□□□ -1.94
CHD1-207ENST00000511628 CD27P26842 260 aa2.92□□□□□ -1.94
CHD1-207ENST00000511628 CDC25CP30307 473 aa2.92□□□□□ -1.94
CHD1-207ENST00000511628 ASCL1P50553 236 aa2.92□□□□□ -1.94
CHD1-207ENST00000511628 BMXP51813 675 aa2.92□□□□□ -1.94
CHD1-207ENST00000511628 NR0B1P51843 470 aaKnown RBP2.92□□□□□ -1.94
CHD1-207ENST00000511628 GSDMDP57764 484 aa2.92□□□□□ -1.94
CHD1-207ENST00000511628 NFE2L1Q14494 772 aa2.92□□□□□ -1.94
CHD1-207ENST00000511628 KIR2DS3Q14952 304 aa2.92□□□□□ -1.94
CHD1-207ENST00000511628 E2F5Q15329 346 aa2.92□□□□□ -1.94
CHD1-207ENST00000511628 CA9Q16790 459 aa2.92□□□□□ -1.94
CHD1-207ENST00000511628 C14orf177Q52M58 125 aa2.92□□□□□ -1.94
CHD1-207ENST00000511628 CORO6Q6QEF8 472 aa2.92□□□□□ -1.94
CHD1-207ENST00000511628 PET117Q6UWS5 81 aa2.92□□□□□ -1.94
CHD1-207ENST00000511628 TMEM182Q6ZP80 229 aaPredicted RBP2.92□□□□□ -1.94
CHD1-207ENST00000511628 TTC30BQ8N4P2 665 aa2.92□□□□□ -1.94
CHD1-207ENST00000511628 ADAD2Q8NCV1 583 aaKnown RBP2.92□□□□□ -1.94
CHD1-207ENST00000511628 KLHDC9Q8NEP7 349 aa2.92□□□□□ -1.94
CHD1-207ENST00000511628 VANGL1Q8TAA9 524 aaPredicted RBP2.92□□□□□ -1.94
CHD1-207ENST00000511628 GRHL3Q8TE85 626 aa2.92□□□□□ -1.94
CHD1-207ENST00000511628 ZNF473Q8WTR7 871 aaKnown RBP2.92□□□□□ -1.94
CHD1-207ENST00000511628 ATL1Q8WXF7 558 aa2.92□□□□□ -1.94
CHD1-207ENST00000511628 IRGQQ8WZA9 623 aa2.92□□□□□ -1.94
CHD1-207ENST00000511628 NSMAFQ92636 917 aa2.92□□□□□ -1.94
CHD1-207ENST00000511628 ST6GALNAC6Q969X2 333 aa2.92□□□□□ -1.94
CHD1-207ENST00000511628 EXOC4Q96A65 974 aa2.92□□□□□ -1.94
CHD1-207ENST00000511628 DHX58Q96C10 678 aa2.92□□□□□ -1.94
CHD1-207ENST00000511628 RMDN2Q96LZ7 410 aa2.92□□□□□ -1.94
CHD1-207ENST00000511628 SPAG5Q96R06 1193 aa2.92□□□□□ -1.94
CHD1-207ENST00000511628 APOBEC3GQ9HC16 384 aaKnown RBP2.92□□□□□ -1.94
CHD1-207ENST00000511628 XAB2Q9HCS7 855 aaKnown RBP2.92□□□□□ -1.94
CHD1-207ENST00000511628 ECHDC1Q9NTX5 307 aa2.92□□□□□ -1.94
CHD1-207ENST00000511628 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.92□□□□□ -1.94
CHD1-207ENST00000511628 TBC1D7Q9P0N9 293 aa2.92□□□□□ -1.94
CHD1-207ENST00000511628 DAPK2Q9UIK4 370 aa2.92□□□□□ -1.94
CHD1-207ENST00000511628 RASAL2Q9UJF2 1139 aa2.92□□□□□ -1.94
CHD1-207ENST00000511628 WDR83OSQ9Y284 106 aa2.92□□□□□ -1.94
CHD1-207ENST00000511628 KIAA1210Q9ULL0 1709 aa2.91□□□□□ -1.94
CHD1-207ENST00000511628 A0A1W2PRB8 838 aa2.91□□□□□ -1.94
CHD1-207ENST00000511628 DUXAA6NLW8 204 aa2.91□□□□□ -1.94
CHD1-207ENST00000511628 PRR32B1ATL7 298 aa2.91□□□□□ -1.94
CHD1-207ENST00000511628 PRKNO60260 465 aaPredicted RBP2.91□□□□□ -1.94
CHD1-207ENST00000511628 SIX3O95343 332 aaPredicted RBP2.91□□□□□ -1.94
CHD1-207ENST00000511628 SLU7O95391 586 aaKnown RBP2.91□□□□□ -1.94
CHD1-207ENST00000511628 GSRP00390 522 aa2.91□□□□□ -1.94
CHD1-207ENST00000511628 SUPT20HL2P0C7V6 817 aa2.91□□□□□ -1.94
CHD1-207ENST00000511628 HSPA8P11142 646 aaKnown RBP2.91□□□□□ -1.94
CHD1-207ENST00000511628 EPHA2P29317 976 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms