RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 CMC1Q7Z7K0 106 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 ZNF605Q86T29 641 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 BPHLQ86WA6 291 aaPredicted RBP8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 LRRC6Q86X45 466 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 TMEM126BQ8IUX1 230 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 PALM2Q8IXS6 379 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 IFT20Q8IY31 132 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 DENND1AQ8TEH3 1009 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 DCAKDQ8WVC6 231 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 ASZ1Q8WWH4 475 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 N4BP2L2Q92802 583 aaPredicted RBP8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 KCNJ9Q92806 393 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 MED8Q96G25 268 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 VPS39Q96JC1 886 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 RBBP8Q99708 897 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 PARD6BQ9BYG5 372 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 FAM129AQ9BZQ8 928 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 UNKQ9C0B0 810 aaKnown RBP8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 KLHL25Q9H0H3 589 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 TFB2MQ9H5Q4 396 aaKnown RBP8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 ACSS3Q9H6R3 686 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 PPANQ9NQ55 473 aaKnown RBP8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 EURLQ9NYK6 297 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 CTNNAL1Q9UBT7 734 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 IL17BQ9UHF5 180 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 POLG2Q9UHN1 485 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 CROTQ9UKG9 612 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 ADAMTS6Q9UKP5 1117 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 RAB21Q9UL25 225 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 PADI1Q9ULC6 663 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 ICKQ9UPZ9 632 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 DHRS7Q9Y394 339 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 PCDHB3Q9Y5E6 796 aa8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 HEMK1Q9Y5R4 338 aaPredicted RBP8.46□□□□□ -1.06
PDLIM5-213ENST00000509357 FAM95CA0A1B0GW59 222 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 PIPSLA2A3N6 862 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 ARHGEF33A8MVX0 844 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 BTN3A3O00478 584 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 NDC80O14777 642 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 PHGDHO43175 533 aaKnown RBP8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 SCRG1O75711 98 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 MATN4O95460 622 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 RPN2P04844 631 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 FAM87AP0C7U9 286 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 SFTPCP11686 197 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 MCM3P25205 808 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 PRDX3P30048 256 aaKnown RBP8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 SHMT2P34897 504 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 STAT5AP42229 794 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 CCR10P46092 362 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 PMS2P54278 862 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 ABRQ12979 859 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 MAP7Q14244 749 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 ZKSCAN8Q15776 578 aaPredicted RBP8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 KLHL38Q2WGJ6 581 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 DEFB109BQ30KR1 87 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 RNF187Q5TA31 235 aaPredicted RBP8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 WDR93Q6P2C0 686 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 MBOAT1Q6ZNC8 495 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 SLC26A11Q86WA9 606 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 FAM20CQ8IXL6 584 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 LMNTD2Q8IXW0 634 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 TBC1D21Q8IYX1 336 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 CARFQ8N187 725 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 ZNF843Q8N446 348 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 D2HGDHQ8N465 521 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 SPATA6LQ8N4H0 392 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 ZBTB2Q8N680 514 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 PPM1NQ8N819 430 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 GPATCH11Q8N954 259 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 LINC01555Q8NAE3 123 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 CALML6Q8TD86 181 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 MZB1Q8WU39 189 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 EEF1AKMT1Q8WVE0 214 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 SLC44A1Q8WWI5 657 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 STARD8Q92502 1023 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 MR1Q95460 341 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 MRRFQ96E11 262 aaKnown RBP8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 SLC45A3Q96JT2 553 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 CATSPER2Q96P56 530 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 IL17FQ96PD4 163 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 FCRL4Q96PJ5 515 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 PANX3Q96QZ0 392 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 GPR22Q99680 433 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 SLC12A9Q9BXP2 914 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 SPRY4Q9C004 299 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 FAM117AQ9C073 453 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 RHOJQ9H4E5 214 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 SYNPO2LQ9H987 977 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 C1GALT1Q9NS00 363 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 IRAK4Q9NWZ3 460 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 SPHK1Q9NYA1 384 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 ACTR10Q9NZ32 417 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 ZFATQ9P243 1243 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 KCND3Q9UK17 655 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 POMT2Q9UKY4 750 aa8.45□□□□□ -1.06
PDLIM5-213ENST00000509357 PCM1Q15154 2024 aa8.44□□□□□ -1.06
PDLIM5-213ENST00000509357 ISM1B1AKI9 464 aa8.44□□□□□ -1.06
PDLIM5-213ENST00000509357 TMEM150CB9EJG8 249 aa8.44□□□□□ -1.06
PDLIM5-213ENST00000509357 KPNA5O15131 536 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms