RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 SPACA3Q8IXA5 215 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 RBM12BQ8IXT5 1001 aaKnown RBP6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 LRRC56Q8IYG6 542 aaPredicted RBP6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 ZBED8Q8IZ13 594 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 SHISA5Q8N114 240 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 DTWD1Q8N5C7 304 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 C2orf73Q8N5S3 287 aaPredicted RBP6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 ZBTB2Q8N680 514 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 AVL9Q8NBF6 648 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 KCNJ9Q92806 393 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 USP7Q93009 1102 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 NAF1Q96HR8 494 aaKnown RBP6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 TMEM74Q96NL1 305 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 OR2A14Q96R47 310 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 FERD3LQ96RJ6 166 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 FAM167BQ9BTA0 163 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 EPB41L4BQ9H329 900 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 TFB2MQ9H5Q4 396 aaKnown RBP6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 L2HGDHQ9H9P8 463 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 FAM60AQ9NP50 221 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 SAYSD1Q9NPB0 183 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 LATS2Q9NRM7 1088 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 NINJ2Q9NZG7 142 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 SAMD15Q9P1V8 674 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 ZC3H7BQ9UGR2 993 aaKnown RBP6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 PCDHGA7Q9Y5G6 932 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 PCDHGA3Q9Y5H0 932 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 URB1O60287 2271 aaKnown RBP6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 IGKV1-8A0A0C4DH67 115 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 HMX2A2RU54 273 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 CTAGE15A4D2H0 777 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 KLHL33A6NCF5 533 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 TLCD2A6NGC4 264 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 FAM159BA6NKW6 160 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 B4E171 279 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 MYO1CO00159 1063 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 EREGO14944 169 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 PSIP1O75475 530 aaKnown RBP6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 C1orf105O95561 183 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 CHRM5P08912 532 aaPredicted RBP6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 GSTM1P09488 218 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 NELFEP18615 380 aaKnown RBP6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 ITGAXP20702 1163 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 F8A1P23610 371 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 ATP5DP30049 168 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 TSPAN7P41732 249 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 MAPK10P53779 464 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 PLTPP55058 493 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 ARL4CP56559 192 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 FOXL2P58012 376 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 SARNPP82979 210 aaKnown RBP6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 MC2RQ01718 297 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 GSTM4Q03013 218 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 CKAP4Q07065 602 aaKnown RBP6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 TRA2AQ13595 282 aaKnown RBP eCLIP6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 PLCL1Q15111 1095 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 GPR19Q15760 415 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 PHKG1Q16816 387 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 COL28A1Q2UY09 1125 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 PLEKHS1Q5SXH7 462 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 RNF187Q5TA31 235 aaPredicted RBP6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 FAM219BQ5XKK7 198 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 LCN10Q6JVE6 187 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 C8orf74Q6P047 294 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 C19orf48Q6RUI8 117 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 UNC5DQ6UXZ4 953 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 LRRC69Q6ZNQ3 347 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 PCGF5Q86SE9 256 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 GALNT7Q86SF2 657 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 CTAGE6Q86UF2 777 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 ZC3HC1Q86WB0 502 aaKnown RBP6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 CEP97Q8IW35 865 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 DCUN1D3Q8IWE4 304 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 PDIK1LQ8N165 341 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 OR4E2Q8NGC2 313 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 GSDMBQ8TAX9 411 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 ANKRD49Q8WVL7 239 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 SH3KBP1Q96B97 665 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 ZNF578Q96N58 590 aaPredicted RBP6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 BBC3Q96PG8 261 aaPredicted RBP6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 TRAPPC9Q96Q05 1148 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 TCF12Q99081 682 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 RSRP1Q9BUV0 290 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 EPB41L1Q9H4G0 881 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 STN1Q9H668 368 aaKnown RBP6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 MVB12BQ9H7P6 319 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 VPS37BQ9H9H4 285 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 AKIRIN1Q9H9L7 192 aaPredicted RBP6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 CAB39LQ9H9S4 337 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 SLC6A20Q9NP91 592 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 HRASLS2Q9NWW9 162 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 ACTR10Q9NZ32 417 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 ASF1AQ9Y294 204 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 BTRCQ9Y297 605 aa6.96□□□□□ -1.3
TOPBP1-207ENST00000509162 SPTBP11277 2137 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 A0A1W2PNR3 127 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 MAGEB16A2A368 324 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 SLC9B1P1A6NJY1 282 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms