RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 GTF3AQ92664 365 aaKnown RBP3.84□□□□□ -1.79
UBE2D3-225ENST00000508476 SPDL1Q96EA4 605 aa3.84□□□□□ -1.79
UBE2D3-225ENST00000508476 FAM20AQ96MK3 541 aa3.84□□□□□ -1.79
UBE2D3-225ENST00000508476 TIGD1Q96MW7 591 aa3.84□□□□□ -1.79
UBE2D3-225ENST00000508476 GPATCH1Q9BRR8 931 aaKnown RBP3.84□□□□□ -1.79
UBE2D3-225ENST00000508476 KRTAP4-4Q9BYR3 166 aa3.84□□□□□ -1.79
UBE2D3-225ENST00000508476 PITPNM3Q9BZ71 974 aa3.84□□□□□ -1.79
UBE2D3-225ENST00000508476 ZHX3Q9H4I2 956 aa3.84□□□□□ -1.79
UBE2D3-225ENST00000508476 EQTNQ9NQ60 294 aa3.84□□□□□ -1.79
UBE2D3-225ENST00000508476 SLC35C2Q9NQQ7 365 aa3.84□□□□□ -1.79
UBE2D3-225ENST00000508476 GKN1Q9NS71 199 aa3.84□□□□□ -1.79
UBE2D3-225ENST00000508476 FAM207AQ9NSI2 230 aaPredicted RBP3.84□□□□□ -1.79
UBE2D3-225ENST00000508476 OR6C2Q9NZP2 312 aa3.84□□□□□ -1.79
UBE2D3-225ENST00000508476 TMED3Q9Y3Q3 217 aa3.84□□□□□ -1.79
UBE2D3-225ENST00000508476 LAS1LQ9Y4W2 734 aaKnown RBP3.84□□□□□ -1.79
UBE2D3-225ENST00000508476 NME7Q9Y5B8 376 aa3.84□□□□□ -1.79
UBE2D3-225ENST00000508476 ITIH6Q6UXX5 1313 aa3.84□□□□□ -1.79
UBE2D3-225ENST00000508476 KPNA7A9QM74 516 aa3.83□□□□□ -1.8
UBE2D3-225ENST00000508476 SRSF10O75494 262 aaKnown RBP3.83□□□□□ -1.8
UBE2D3-225ENST00000508476 SEC24AO95486 1093 aa3.83□□□□□ -1.8
UBE2D3-225ENST00000508476 CSH1P0DML2 217 aa3.83□□□□□ -1.8
UBE2D3-225ENST00000508476 CSH2P0DML3 217 aa3.83□□□□□ -1.8
UBE2D3-225ENST00000508476 RAPSNQ13702 412 aa3.83□□□□□ -1.8
UBE2D3-225ENST00000508476 LCE3EQ5T5B0 92 aa3.83□□□□□ -1.8
UBE2D3-225ENST00000508476 C4orf50Q6ZRC1 276 aa3.83□□□□□ -1.8
UBE2D3-225ENST00000508476 ARHGAP22Q7Z5H3 698 aa3.83□□□□□ -1.8
UBE2D3-225ENST00000508476 Q8N377 158 aa3.83□□□□□ -1.8
UBE2D3-225ENST00000508476 EXD1Q8NHP7 514 aa3.83□□□□□ -1.8
UBE2D3-225ENST00000508476 SDF4Q9BRK5 362 aa3.83□□□□□ -1.8
UBE2D3-225ENST00000508476 WWTR1Q9GZV5 400 aa3.83□□□□□ -1.8
UBE2D3-225ENST00000508476 OPA3Q9H6K4 179 aa3.83□□□□□ -1.8
UBE2D3-225ENST00000508476 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.83□□□□□ -1.8
UBE2D3-225ENST00000508476 hCG_1807616A0A1W2PRN6 198 aa3.82□□□□□ -1.8
UBE2D3-225ENST00000508476 C2orf81A6NN90 581 aa3.82□□□□□ -1.8
UBE2D3-225ENST00000508476 IDH3BO43837 385 aa3.82□□□□□ -1.8
UBE2D3-225ENST00000508476 PRKACGP22612 351 aa3.82□□□□□ -1.8
UBE2D3-225ENST00000508476 LHCGRP22888 699 aa3.82□□□□□ -1.8
UBE2D3-225ENST00000508476 MPZP25189 248 aa3.82□□□□□ -1.8
UBE2D3-225ENST00000508476 RBMS1P29558 406 aaKnown RBP3.82□□□□□ -1.8
UBE2D3-225ENST00000508476 STAT2P52630 851 aa3.82□□□□□ -1.8
UBE2D3-225ENST00000508476 HUNKP57058 714 aa3.82□□□□□ -1.8
UBE2D3-225ENST00000508476 GEMIN4P57678 1058 aaKnown RBP3.82□□□□□ -1.8
UBE2D3-225ENST00000508476 CSNK2BP67870 215 aa3.82□□□□□ -1.8
UBE2D3-225ENST00000508476 ELAVL2Q12926 359 aaKnown RBP3.82□□□□□ -1.8
UBE2D3-225ENST00000508476 CALCOCO2Q13137 446 aa3.82□□□□□ -1.8
UBE2D3-225ENST00000508476 MTF1Q14872 753 aa3.82□□□□□ -1.8
UBE2D3-225ENST00000508476 UGT3A2Q3SY77 523 aa3.82□□□□□ -1.8
UBE2D3-225ENST00000508476 Q8NBF4 154 aa3.82□□□□□ -1.8
UBE2D3-225ENST00000508476 PIGBQ92521 554 aa3.82□□□□□ -1.8
UBE2D3-225ENST00000508476 SLC22A18Q96BI1 424 aa3.82□□□□□ -1.8
UBE2D3-225ENST00000508476 FOXN4Q96NZ1 517 aa3.82□□□□□ -1.8
UBE2D3-225ENST00000508476 NAP1L4Q99733 375 aaKnown RBP3.82□□□□□ -1.8
UBE2D3-225ENST00000508476 TREX2Q9BQ50 279 aaPredicted RBP3.82□□□□□ -1.8
UBE2D3-225ENST00000508476 CCDC3Q9BQI4 270 aa3.82□□□□□ -1.8
UBE2D3-225ENST00000508476 MIS12Q9H081 205 aa3.82□□□□□ -1.8
UBE2D3-225ENST00000508476 SLC7A10Q9NS82 523 aa3.82□□□□□ -1.8
UBE2D3-225ENST00000508476 VPS28Q9UK41 221 aa3.82□□□□□ -1.8
UBE2D3-225ENST00000508476 PADI2Q9Y2J8 665 aa3.82□□□□□ -1.8
UBE2D3-225ENST00000508476 RSF1Q96T23 1441 aaPredicted RBP3.81□□□□□ -1.8
UBE2D3-225ENST00000508476 IGHV3OR16-10A0A075B7F0 116 aa3.81□□□□□ -1.8
UBE2D3-225ENST00000508476 A8MV72 311 aaPredicted RBP3.81□□□□□ -1.8
UBE2D3-225ENST00000508476 FPGTO14772 594 aa3.81□□□□□ -1.8
UBE2D3-225ENST00000508476 GLRA3O75311 464 aa3.81□□□□□ -1.8
UBE2D3-225ENST00000508476 CDK2AP2O75956 126 aa3.81□□□□□ -1.8
UBE2D3-225ENST00000508476 C22orf31O95567 290 aa3.81□□□□□ -1.8
UBE2D3-225ENST00000508476 DANCRP0C864 163 aa3.81□□□□□ -1.8
UBE2D3-225ENST00000508476 HAPLN1P10915 354 aaPredicted RBP3.81□□□□□ -1.8
UBE2D3-225ENST00000508476 MS4A2Q01362 244 aa3.81□□□□□ -1.8
UBE2D3-225ENST00000508476 CHAF1BQ13112 559 aa3.81□□□□□ -1.8
UBE2D3-225ENST00000508476 SH2D6Q7Z4S9 175 aa3.81□□□□□ -1.8
UBE2D3-225ENST00000508476 CATSPERDQ86XM0 798 aa3.81□□□□□ -1.8
UBE2D3-225ENST00000508476 CDC20BQ86Y33 519 aa3.81□□□□□ -1.8
UBE2D3-225ENST00000508476 MMD2Q8IY49 270 aa3.81□□□□□ -1.8
UBE2D3-225ENST00000508476 MCUQ8NE86 351 aa3.81□□□□□ -1.8
UBE2D3-225ENST00000508476 OR6S1Q8NH40 331 aa3.81□□□□□ -1.8
UBE2D3-225ENST00000508476 APOBEC4Q8WW27 367 aaKnown RBP3.81□□□□□ -1.8
UBE2D3-225ENST00000508476 SYN2Q92777 582 aaPredicted RBP3.81□□□□□ -1.8
UBE2D3-225ENST00000508476 ZNF622Q969S3 477 aaKnown RBP eCLIP3.81□□□□□ -1.8
UBE2D3-225ENST00000508476 NXNL1Q96CM4 212 aa3.81□□□□□ -1.8
UBE2D3-225ENST00000508476 PRICKLE1Q96MT3 831 aaPredicted RBP3.81□□□□□ -1.8
UBE2D3-225ENST00000508476 SOSTQ9BQB4 213 aa3.81□□□□□ -1.8
UBE2D3-225ENST00000508476 WNT5BQ9H1J7 359 aa3.81□□□□□ -1.8
UBE2D3-225ENST00000508476 GOLPH3LQ9H4A5 285 aa3.81□□□□□ -1.8
UBE2D3-225ENST00000508476 PPANQ9NQ55 473 aaKnown RBP3.81□□□□□ -1.8
UBE2D3-225ENST00000508476 DPP3Q9NY33 737 aa3.81□□□□□ -1.8
UBE2D3-225ENST00000508476 FBXO2Q9UK22 296 aaPredicted RBP3.81□□□□□ -1.8
UBE2D3-225ENST00000508476 PCDHGB4Q9UN71 923 aa3.81□□□□□ -1.8
UBE2D3-225ENST00000508476 TRIM17Q9Y577 477 aa3.81□□□□□ -1.8
UBE2D3-225ENST00000508476 MPTX1A8MV57 137 aa3.8□□□□□ -1.8
UBE2D3-225ENST00000508476 EPHB6O15197 1021 aa3.8□□□□□ -1.8
UBE2D3-225ENST00000508476 SLC2A2P11168 524 aaPredicted RBP3.8□□□□□ -1.8
UBE2D3-225ENST00000508476 CSTF2P33240 577 aaKnown RBP eCLIP3.8□□□□□ -1.83e-8■■■■□ 24.2
UBE2D3-225ENST00000508476 FASTKD3Q14CZ7 662 aaKnown RBP3.8□□□□□ -1.8
UBE2D3-225ENST00000508476 WTAPQ15007 396 aa3.8□□□□□ -1.8
UBE2D3-225ENST00000508476 EXT1Q16394 746 aa3.8□□□□□ -1.8
UBE2D3-225ENST00000508476 MEA1Q16626 185 aa3.8□□□□□ -1.8
UBE2D3-225ENST00000508476 MOGAT2Q3SYC2 334 aa3.8□□□□□ -1.8
UBE2D3-225ENST00000508476 PDLIM3Q53GG5 364 aaPredicted RBP3.8□□□□□ -1.8
UBE2D3-225ENST00000508476 SLC35D3Q5M8T2 416 aa3.8□□□□□ -1.8
UBE2D3-225ENST00000508476 LCN1P1Q5VSP4 162 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms