RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 TAZQ16635 292 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 CDKN3Q16667 212 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 ST3GAL2Q16842 350 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 ALG11Q2TAA5 492 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 TSTD2Q5T7W7 516 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 ARMC12Q5T9G4 340 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 LRRC38Q5VT99 294 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 SLC9A4Q6AI14 798 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 PNCKQ6P2M8 343 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 CRTC1Q6UUV9 634 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 KYAT3Q6YP21 454 aaKnown RBP4.5□□□□□ -1.69
NUP54-206ENST00000508465 CCNI2Q6ZMN8 369 aaPredicted RBP4.5□□□□□ -1.69
NUP54-206ENST00000508465 FKBP9P1Q75LS8 142 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 DPPA4Q7L190 304 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 TRIM74Q86UV6 250 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 LRRC49Q8IUZ0 686 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 TMEM139Q8IV31 216 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 CCDC50Q8IVM0 306 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 SFTPA2Q8IWL1 248 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 CCDC13Q8IYE1 715 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 CBARPQ8N350 705 aaPredicted RBP4.5□□□□□ -1.69
NUP54-206ENST00000508465 BBS5Q8N3I7 341 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 ZNF548Q8NEK5 533 aaPredicted RBP4.5□□□□□ -1.69
NUP54-206ENST00000508465 LPCAT1Q8NF37 534 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 OR4C6Q8NH72 309 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 ATL2Q8NHH9 583 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 KIAA1524Q8TCG1 905 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 ASB12Q8WXK4 309 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 ADAMTS14Q8WXS8 1223 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 OR1E3Q8WZA6 343 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 SCAMP4Q969E2 229 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 ZBTB9Q96C00 473 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 SCRN2Q96FV2 425 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 RAX2Q96IS3 184 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 APOLD1Q96LR9 279 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 IL12RB2Q99665 862 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 HERPUD2Q9BSE4 406 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 SLC13A1Q9BZW2 595 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 ABCG8Q9H221 673 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 GLOD4Q9HC38 313 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 ARFGAP3Q9NP61 516 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 MOSPD1Q9UJG1 213 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 RALYQ9UKM9 306 aaKnown RBP4.5□□□□□ -1.69
NUP54-206ENST00000508465 PHTF1Q9UMS5 762 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 PACSIN2Q9UNF0 486 aaPredicted RBP4.5□□□□□ -1.69
NUP54-206ENST00000508465 PLEKHM1Q9Y4G2 1056 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 SHROOM3Q8TF72 1996 aa4.5□□□□□ -1.69
NUP54-206ENST00000508465 hCG_1818297A0A087WSY0 165 aa4.49□□□□□ -1.69
NUP54-206ENST00000508465 LY6G6EA0A0G2JKS1 128 aa4.49□□□□□ -1.69
NUP54-206ENST00000508465 TCRBV7S2A1N4TA0A589 114 aa4.49□□□□□ -1.69
NUP54-206ENST00000508465 NEMP2A6NFY4 417 aa4.49□□□□□ -1.69
NUP54-206ENST00000508465 ALG1L2C9J202 215 aa4.49□□□□□ -1.69
NUP54-206ENST00000508465 H7C0C1 242 aa4.49□□□□□ -1.69
NUP54-206ENST00000508465 TAF4O00268 1085 aa4.49□□□□□ -1.69
NUP54-206ENST00000508465 INPP4BO15327 924 aa4.49□□□□□ -1.69
NUP54-206ENST00000508465 YKT6O15498 198 aa4.49□□□□□ -1.69
NUP54-206ENST00000508465 KCNAB3O43448 404 aa4.49□□□□□ -1.69
NUP54-206ENST00000508465 SOCS5O75159 536 aa4.49□□□□□ -1.69
NUP54-206ENST00000508465 HEXIM1O94992 359 aaKnown RBP4.49□□□□□ -1.69
NUP54-206ENST00000508465 TRIM16O95361 564 aa4.49□□□□□ -1.69
NUP54-206ENST00000508465 FTCDO95954 541 aa4.49□□□□□ -1.69
NUP54-206ENST00000508465 MT-CYBP00156 380 aaPredicted RBP4.49□□□□□ -1.69
NUP54-206ENST00000508465 TNFP01375 233 aa4.49□□□□□ -1.69
NUP54-206ENST00000508465 SLC4A1P02730 911 aa4.49□□□□□ -1.69
NUP54-206ENST00000508465 PROS1P07225 676 aa4.49□□□□□ -1.69
NUP54-206ENST00000508465 ANXA6P08133 673 aa4.49□□□□□ -1.69
NUP54-206ENST00000508465 CTSEP14091 401 aa4.49□□□□□ -1.69
NUP54-206ENST00000508465 ZFXP17010 805 aaPredicted RBP4.49□□□□□ -1.69
NUP54-206ENST00000508465 HSPA9P38646 679 aaKnown RBP4.49□□□□□ -1.69
NUP54-206ENST00000508465 GRIA3P42263 894 aa4.49□□□□□ -1.69
NUP54-206ENST00000508465 ATP5OP48047 213 aa4.49□□□□□ -1.69
NUP54-206ENST00000508465 ACADVLP49748 655 aa4.49□□□□□ -1.69
NUP54-206ENST00000508465 PEX5P50542 639 aa4.49□□□□□ -1.69
NUP54-206ENST00000508465 HK3P52790 923 aa4.49□□□□□ -1.69
NUP54-206ENST00000508465 HADHBP55084 474 aaKnown RBP4.49□□□□□ -1.69
NUP54-206ENST00000508465 HNRNPKP61978 463 aaKnown RBP eCLIP4.49□□□□□ -1.697e-6■□□□□ 8.5
NUP54-206ENST00000508465 YPEL5P62699 121 aa4.49□□□□□ -1.69
NUP54-206ENST00000508465 IFI35P80217 286 aaPredicted RBP4.49□□□□□ -1.69
NUP54-206ENST00000508465 PPARDQ03181 441 aa4.49□□□□□ -1.69
NUP54-206ENST00000508465 PPIDQ08752 370 aaKnown RBP4.49□□□□□ -1.69
NUP54-206ENST00000508465 WASHC5Q12768 1159 aa4.49□□□□□ -1.69
NUP54-206ENST00000508465 ARHGEF7Q14155 803 aa4.49□□□□□ -1.69
NUP54-206ENST00000508465 TFDP2Q14188 446 aa4.49□□□□□ -1.69
NUP54-206ENST00000508465 PTK2BQ14289 1009 aa4.49□□□□□ -1.69
NUP54-206ENST00000508465 NFATC4Q14934 902 aa4.49□□□□□ -1.69
NUP54-206ENST00000508465 PDK1Q15118 436 aa4.49□□□□□ -1.69
NUP54-206ENST00000508465 NOMO1Q15155 1222 aa4.49□□□□□ -1.69
NUP54-206ENST00000508465 KCTD19Q17RG1 926 aaPredicted RBP4.49□□□□□ -1.69
NUP54-206ENST00000508465 INAVAQ3KP66 663 aa4.49□□□□□ -1.69
NUP54-206ENST00000508465 TFDP3Q5H9I0 405 aa4.49□□□□□ -1.69
NUP54-206ENST00000508465 LRRC66Q68CR7 880 aa4.49□□□□□ -1.69
NUP54-206ENST00000508465 FCRLBQ6BAA4 426 aa4.49□□□□□ -1.69
NUP54-206ENST00000508465 ZNF529Q6P280 563 aa4.49□□□□□ -1.69
NUP54-206ENST00000508465 GUSBP11Q6P575 273 aa4.49□□□□□ -1.69
NUP54-206ENST00000508465 DOK6Q6PKX4 331 aa4.49□□□□□ -1.69
NUP54-206ENST00000508465 USP45Q70EL2 814 aa4.49□□□□□ -1.69
NUP54-206ENST00000508465 MARK2Q7KZI7 788 aaKnown RBP4.49□□□□□ -1.69
NUP54-206ENST00000508465 PID1Q7Z2X4 250 aa4.49□□□□□ -1.69
NUP54-206ENST00000508465 EFL1Q7Z2Z2 1120 aaKnown RBP4.49□□□□□ -1.69
NUP54-206ENST00000508465 TECPR1Q7Z6L1 1165 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms