RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 NSMCE4AQ9NXX6 385 aa19.15■□□□□ 0.66
SFXN1-209ENST00000508290 UTP6Q9NYH9 597 aaKnown RBP19.15■□□□□ 0.66
SFXN1-209ENST00000508290 IL17BQ9UHF5 180 aa19.15■□□□□ 0.66
SFXN1-209ENST00000508290 TUBD1Q9UJT1 453 aa19.15■□□□□ 0.66
SFXN1-209ENST00000508290 SNX24Q9Y343 169 aa19.15■□□□□ 0.66
SFXN1-209ENST00000508290 UTP11Q9Y3A2 253 aaKnown RBP19.15■□□□□ 0.66
SFXN1-209ENST00000508290 MGAQ8IWI9 3026 aa19.14■□□□□ 0.66
SFXN1-209ENST00000508290 ARHGEF33A8MVX0 844 aa19.14■□□□□ 0.65
SFXN1-209ENST00000508290 TP73O15350 636 aa19.14■□□□□ 0.65
SFXN1-209ENST00000508290 PRICKLE3O43900 615 aaPredicted RBP19.14■□□□□ 0.65
SFXN1-209ENST00000508290 CCNDBP1O95273 360 aa19.14■□□□□ 0.65
SFXN1-209ENST00000508290 RAB40ALP0C0E4 278 aa19.14■□□□□ 0.65
SFXN1-209ENST00000508290 MAGP20916 626 aa19.14■□□□□ 0.65
SFXN1-209ENST00000508290 AGXTP21549 392 aa19.14■□□□□ 0.65
SFXN1-209ENST00000508290 RORAP35398 523 aa19.14■□□□□ 0.65
SFXN1-209ENST00000508290 CCR10P46092 362 aa19.14■□□□□ 0.65
SFXN1-209ENST00000508290 GABRA4P48169 554 aa19.14■□□□□ 0.65
SFXN1-209ENST00000508290 CARSP49589 748 aaKnown RBP19.14■□□□□ 0.65
SFXN1-209ENST00000508290 PDIA2Q13087 525 aaKnown RBP19.14■□□□□ 0.65
SFXN1-209ENST00000508290 TBR1Q16650 682 aa19.14■□□□□ 0.65
SFXN1-209ENST00000508290 TEDDM1Q5T9Z0 273 aa19.14■□□□□ 0.65
SFXN1-209ENST00000508290 YOD1Q5VVQ6 348 aaPredicted RBP19.14■□□□□ 0.65
SFXN1-209ENST00000508290 SYVN1Q86TM6 617 aa19.14■□□□□ 0.65
SFXN1-209ENST00000508290 IGDCC3Q8IVU1 814 aa19.14■□□□□ 0.65
SFXN1-209ENST00000508290 DSELQ8IZU8 1212 aa19.14■□□□□ 0.65
SFXN1-209ENST00000508290 DNAJC22Q8N4W6 341 aa19.14■□□□□ 0.65
SFXN1-209ENST00000508290 GIMAP7Q8NHV1 300 aa19.14■□□□□ 0.65
SFXN1-209ENST00000508290 PROKR1Q8TCW9 393 aa19.14■□□□□ 0.65
SFXN1-209ENST00000508290 MR1Q95460 341 aa19.14■□□□□ 0.65
SFXN1-209ENST00000508290 CFAP36Q96G28 342 aa19.14■□□□□ 0.65
SFXN1-209ENST00000508290 IL17FQ96PD4 163 aa19.14■□□□□ 0.65
SFXN1-209ENST00000508290 KLHL25Q9H0H3 589 aa19.14■□□□□ 0.65
SFXN1-209ENST00000508290 FAM60AQ9NP50 221 aa19.14■□□□□ 0.65
SFXN1-209ENST00000508290 ZFATQ9P243 1243 aa19.14■□□□□ 0.65
SFXN1-209ENST00000508290 ANKMY1Q9P2S6 941 aa19.14■□□□□ 0.65
SFXN1-209ENST00000508290 GALPQ9UBC7 116 aa19.14■□□□□ 0.65
SFXN1-209ENST00000508290 RUVBL2Q9Y230 463 aaKnown RBP19.14■□□□□ 0.65
SFXN1-209ENST00000508290 GFYI3L273 518 aa19.13■□□□□ 0.65
SFXN1-209ENST00000508290 ZSCAN9O15535 394 aaPredicted RBP19.13■□□□□ 0.65
SFXN1-209ENST00000508290 KATNA1O75449 491 aa19.13■□□□□ 0.65
SFXN1-209ENST00000508290 BANF1O75531 89 aa19.13■□□□□ 0.65
SFXN1-209ENST00000508290 CREG1O75629 220 aa19.13■□□□□ 0.65
SFXN1-209ENST00000508290 AHSGP02765 367 aa19.13■□□□□ 0.65
SFXN1-209ENST00000508290 PTPN4P29074 926 aa19.13■□□□□ 0.65
SFXN1-209ENST00000508290 CMPK1P30085 196 aa19.13■□□□□ 0.65
SFXN1-209ENST00000508290 MGAT5Q09328 741 aa19.13■□□□□ 0.65
SFXN1-209ENST00000508290 C19orf57Q0VDD7 668 aa19.13■□□□□ 0.65
SFXN1-209ENST00000508290 GPS2Q13227 327 aa19.13■□□□□ 0.65
SFXN1-209ENST00000508290 SP140Q13342 867 aa19.13■□□□□ 0.65
SFXN1-209ENST00000508290 ZIC1Q15915 447 aa19.13■□□□□ 0.65
SFXN1-209ENST00000508290 TCTE1Q5JU00 501 aa19.13■□□□□ 0.65
SFXN1-209ENST00000508290 RHBDD2Q6NTF9 364 aa19.13■□□□□ 0.65
SFXN1-209ENST00000508290 SLC26A11Q86WA9 606 aa19.13■□□□□ 0.65
SFXN1-209ENST00000508290 PALM2Q8IXS6 379 aa19.13■□□□□ 0.65
SFXN1-209ENST00000508290 C17orf53Q8N3J3 647 aaPredicted RBP19.13■□□□□ 0.65
SFXN1-209ENST00000508290 DLG3Q92796 817 aa19.13■□□□□ 0.65
SFXN1-209ENST00000508290 EXTL1Q92935 676 aa19.13■□□□□ 0.65
SFXN1-209ENST00000508290 NDC1Q9BTX1 674 aa19.13■□□□□ 0.65
SFXN1-209ENST00000508290 DHRS4Q9BTZ2 278 aa19.13■□□□□ 0.65
SFXN1-209ENST00000508290 PCMTD2Q9NV79 361 aa19.13■□□□□ 0.65
SFXN1-209ENST00000508290 EURLQ9NYK6 297 aa19.13■□□□□ 0.65
SFXN1-209ENST00000508290 LOC400499M0QZD8 3231 aa19.13■□□□□ 0.65
SFXN1-209ENST00000508290 C9J4A7 227 aa19.12■□□□□ 0.65
SFXN1-209ENST00000508290 NKX2-8O15522 239 aa19.12■□□□□ 0.65
SFXN1-209ENST00000508290 ZNF749O43361 778 aa19.12■□□□□ 0.65
SFXN1-209ENST00000508290 RAD51CO43502 376 aa19.12■□□□□ 0.65
SFXN1-209ENST00000508290 SRPX2O60687 465 aaPredicted RBP19.12■□□□□ 0.65
SFXN1-209ENST00000508290 C8GP07360 202 aa19.12■□□□□ 0.65
SFXN1-209ENST00000508290 ARSFP54793 590 aa19.12■□□□□ 0.65
SFXN1-209ENST00000508290 CYP4F2P78329 520 aa19.12■□□□□ 0.65
SFXN1-209ENST00000508290 CCSMST1Q4G0I0 132 aa19.12■□□□□ 0.65
SFXN1-209ENST00000508290 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.12■□□□□ 0.65
SFXN1-209ENST00000508290 DUPD1Q68J44 220 aa19.12■□□□□ 0.65
SFXN1-209ENST00000508290 FAM45BPQ6NSW5 357 aa19.12■□□□□ 0.65
SFXN1-209ENST00000508290 FIGLAQ6QHK4 219 aa19.12■□□□□ 0.65
SFXN1-209ENST00000508290 SYTL1Q8IYJ3 562 aa19.12■□□□□ 0.65
SFXN1-209ENST00000508290 FBXO36Q8NEA4 188 aa19.12■□□□□ 0.65
SFXN1-209ENST00000508290 OR2L3Q8NG85 312 aa19.12■□□□□ 0.65
SFXN1-209ENST00000508290 OR2A1Q8NGT9 310 aa19.12■□□□□ 0.65
SFXN1-209ENST00000508290 FAM45AQ8TCE6 357 aa19.12■□□□□ 0.65
SFXN1-209ENST00000508290 APOBEC4Q8WW27 367 aaKnown RBP19.12■□□□□ 0.65
SFXN1-209ENST00000508290 THAP4Q8WY91 577 aa19.12■□□□□ 0.65
SFXN1-209ENST00000508290 SLC30A3Q99726 388 aa19.12■□□□□ 0.65
SFXN1-209ENST00000508290 NLNQ9BYT8 704 aa19.12■□□□□ 0.65
SFXN1-209ENST00000508290 ACTL8Q9H568 366 aa19.12■□□□□ 0.65
SFXN1-209ENST00000508290 PLAC1Q9HBJ0 212 aa19.12■□□□□ 0.65
SFXN1-209ENST00000508290 CDC23Q9UJX2 597 aa19.12■□□□□ 0.65
SFXN1-209ENST00000508290 POLHQ9Y253 713 aa19.12■□□□□ 0.65
SFXN1-209ENST00000508290 FARSAQ9Y285 508 aaKnown RBP19.12■□□□□ 0.65
SFXN1-209ENST00000508290 PADI2Q9Y2J8 665 aa19.12■□□□□ 0.65
SFXN1-209ENST00000508290 H3BMH7 237 aa19.11■□□□□ 0.65
SFXN1-209ENST00000508290 KIF2AO00139 706 aaPredicted RBP19.11■□□□□ 0.65
SFXN1-209ENST00000508290 SLC16A5O15375 505 aa19.11■□□□□ 0.65
SFXN1-209ENST00000508290 GSTA2P09210 222 aa19.11■□□□□ 0.65
SFXN1-209ENST00000508290 F8A1P23610 371 aa19.11■□□□□ 0.65
SFXN1-209ENST00000508290 GABRB3P28472 473 aa19.11■□□□□ 0.65
SFXN1-209ENST00000508290 RPA3P35244 121 aaPredicted RBP19.11■□□□□ 0.65
SFXN1-209ENST00000508290 PNLIPRP1P54315 467 aa19.11■□□□□ 0.65
SFXN1-209ENST00000508290 ABATP80404 500 aa19.11■□□□□ 0.65
SFXN1-209ENST00000508290 RELAQ04206 551 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms