RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 OR2T29Q8NH02 315 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 OR10A6Q8NH74 314 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 PSMA8Q8TAA3 256 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 C9orf43Q8TAL5 461 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 NDNFQ8TB73 568 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 SETD6Q8TBK2 473 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZDHHC1Q8WTX9 485 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 UBTD2Q8WUN7 234 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 TMEM40Q8WWA1 233 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 GTF2H4Q92759 462 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 TRIM63Q969Q1 353 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 PSMG2Q969U7 264 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 SLC39A13Q96H72 371 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 CRELD1Q96HD1 420 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 FUBP3Q96I24 572 aaKnown RBP eCLIP4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 SUSD3Q96L08 255 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 C8orf48Q96LL4 319 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 KLHL5Q96PQ7 755 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 OR52E6Q96RD3 313 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 CDK5RAP1Q96SZ6 601 aaKnown RBP4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 GAD1Q99259 594 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 ACOX2Q99424 681 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 PKMYT1Q99640 499 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 C19orf43Q9BQ61 176 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 TINF2Q9BSI4 451 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 CCDC32Q9BV29 185 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 CINPQ9BW66 212 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 FAM126AQ9BYI3 521 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 AP5M1Q9H0R1 490 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 TSPAN10Q9H1Z9 355 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 DCSTAMPQ9H295 470 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 RIBC2Q9H4K1 309 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 CLMPQ9H6B4 373 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 NOL6Q9H6R4 1146 aaKnown RBP4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 REEP1Q9H902 201 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 LRTM1Q9HBL6 345 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 ACOT13Q9NPJ3 140 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 ADARB2Q9NS39 739 aaKnown RBP4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 KRT84Q9NSB2 600 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 PLCXD1Q9NUJ7 323 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 FAM105AQ9NUU6 356 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 TMEM30AQ9NV96 361 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 SLAMF8Q9P0V8 285 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 ERVK-18Q9QC07 812 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 CRNNQ9UBG3 495 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 OPTCQ9UBM4 332 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 NDRG4Q9ULP0 352 aaKnown RBP4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 CORO2BQ9UQ03 480 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 FAM50BQ9Y247 325 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 MAN2B2Q9Y2E5 1009 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 Q9Y3F1 56 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 GRIP1Q9Y3R0 1128 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 KCTD3Q9Y597 815 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 TIMM13Q9Y5L4 95 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 TRPV2Q9Y5S1 764 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 ARL5AQ9Y689 179 aa4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 TNS1Q9HBL0 1735 aaKnown RBP4.85□□□□□ -1.63
HMGB3P16-201ENST00000508037 NUP205Q92621 2012 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 ANKRD36A6QL64 1941 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 A0A1W2PQH9 124 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 DCDC2BA2VCK2 349 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 PABPN1LA6NDY0 278 aaKnown RBP4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 ARL5CA6NH57 179 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 METTL15A6NJ78 407 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 PDZK1P1A8MUH7 402 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 FAM25AB3EWG3 89 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 FAM25CB3EWG5 89 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 FAM25GB3EWG6 89 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 F5H5T6 163 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 H7C0S8 307 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 CCL22O00626 93 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 TOR1BO14657 336 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 TNFRSF10BO14763 440 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 HAT1O14929 419 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 STX7O15400 261 aaKnown RBP4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 INSIG1O15503 277 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 OIP5O43482 229 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 IDH3BO43837 385 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 MPZL2O60487 215 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 PRMT3O60678 531 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZNF623O75123 536 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 SEC22BO75396 215 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 B3GAT3O94766 335 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 PARNO95453 639 aaKnown RBP4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 TSPAN12O95859 305 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 FADS2O95864 444 aaKnown RBP4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 FTH1P02794 183 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 MT-ND2P03891 347 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 EBLN1P0CF75 366 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 TRAPPC2P0DI81 140 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 TRAPPC2BP0DI82 140 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 HAPLN1P10915 354 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZNF7P17097 686 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 FUT4P22083 530 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 DGKAP23743 735 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 OR1E1P30953 314 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 FMO3P31513 532 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 KRT20P35900 424 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 ETV6P41212 452 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms