RNA–Protein interactions for RNA: ENST00000506923.5

CLOCK-206, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-206ENST00000506923 CCL4L1Q8NHW4 92 aa3.29□□□□□ -1.88
CLOCK-206ENST00000506923 ZNF480Q8WV37 535 aa3.29□□□□□ -1.88
CLOCK-206ENST00000506923 OR1E3Q8WZA6 343 aa3.29□□□□□ -1.88
CLOCK-206ENST00000506923 FUBP1Q96AE4 644 aaKnown RBP3.29□□□□□ -1.88
CLOCK-206ENST00000506923 CENPTQ96BT3 561 aa3.29□□□□□ -1.88
CLOCK-206ENST00000506923 AP2M1Q96CW1 435 aa3.29□□□□□ -1.88
CLOCK-206ENST00000506923 HDAC11Q96DB2 347 aa3.29□□□□□ -1.88
CLOCK-206ENST00000506923 ECHDC3Q96DC8 303 aa3.29□□□□□ -1.88
CLOCK-206ENST00000506923 RNF31Q96EP0 1072 aa3.29□□□□□ -1.88
CLOCK-206ENST00000506923 DTD2Q96FN9 168 aa3.29□□□□□ -1.88
CLOCK-206ENST00000506923 NSMCE3Q96MG7 304 aa3.29□□□□□ -1.88
CLOCK-206ENST00000506923 ZNF599Q96NL3 588 aa3.29□□□□□ -1.88
CLOCK-206ENST00000506923 AGAP3Q96P47 875 aa3.29□□□□□ -1.88
CLOCK-206ENST00000506923 RNF157Q96PX1 679 aa3.29□□□□□ -1.88
CLOCK-206ENST00000506923 FAM118BQ9BPY3 351 aa3.29□□□□□ -1.88
CLOCK-206ENST00000506923 CCDC3Q9BQI4 270 aa3.29□□□□□ -1.88
CLOCK-206ENST00000506923 DESI2Q9BSY9 194 aa3.29□□□□□ -1.88
CLOCK-206ENST00000506923 HEMGNQ9BXL5 484 aa3.29□□□□□ -1.88
CLOCK-206ENST00000506923 TDRD1Q9BXT4 1180 aaKnown RBP3.29□□□□□ -1.88
CLOCK-206ENST00000506923 CLPBQ9H078 707 aa3.29□□□□□ -1.88
CLOCK-206ENST00000506923 ABCG8Q9H221 673 aa3.29□□□□□ -1.88
CLOCK-206ENST00000506923 DPEP2Q9H4A9 486 aa3.29□□□□□ -1.88
CLOCK-206ENST00000506923 OSGEPL1Q9H4B0 414 aa3.29□□□□□ -1.88
CLOCK-206ENST00000506923 PRDM13Q9H4Q3 707 aa3.29□□□□□ -1.88
CLOCK-206ENST00000506923 PCDH9Q9HC56 1237 aa3.29□□□□□ -1.88
CLOCK-206ENST00000506923 EPB41L5Q9HCM4 733 aa3.29□□□□□ -1.88
CLOCK-206ENST00000506923 FGF22Q9HCT0 170 aa3.29□□□□□ -1.88
CLOCK-206ENST00000506923 ARFGAP3Q9NP61 516 aa3.29□□□□□ -1.88
CLOCK-206ENST00000506923 DDX56Q9NY93 547 aaKnown RBP3.29□□□□□ -1.88
CLOCK-206ENST00000506923 KLHL8Q9P2G9 620 aaPredicted RBP3.29□□□□□ -1.88
CLOCK-206ENST00000506923 LCMT1Q9UIC8 334 aa3.29□□□□□ -1.88
CLOCK-206ENST00000506923 PNMA8BQ9ULN7 279 aaPredicted RBP3.29□□□□□ -1.88
CLOCK-206ENST00000506923 PHTF1Q9UMS5 762 aa3.29□□□□□ -1.88
CLOCK-206ENST00000506923 NENFQ9UMX5 172 aa3.29□□□□□ -1.88
CLOCK-206ENST00000506923 SATB2Q9UPW6 733 aa3.29□□□□□ -1.88
CLOCK-206ENST00000506923 SHOC2Q9UQ13 582 aa3.29□□□□□ -1.88
CLOCK-206ENST00000506923 PCDHGA1Q9Y5H4 931 aa3.29□□□□□ -1.88
CLOCK-206ENST00000506923 PCDHA13Q9Y5I0 950 aa3.29□□□□□ -1.88
CLOCK-206ENST00000506923 SVILO95425 2214 aa3.29□□□□□ -1.88
CLOCK-206ENST00000506923 HELZ2Q9BYK8 2649 aaKnown RBP3.29□□□□□ -1.88
CLOCK-206ENST00000506923 IGSF10Q6WRI0 2623 aa3.28□□□□□ -1.88
CLOCK-206ENST00000506923 USP9XQ93008 2570 aaPredicted RBP3.28□□□□□ -1.88
CLOCK-206ENST00000506923 FREM3P0C091 2139 aa3.28□□□□□ -1.88
CLOCK-206ENST00000506923 ITPR1Q14643 2758 aa3.28□□□□□ -1.88
CLOCK-206ENST00000506923 LY6G6EA0A0G2JKS1 128 aa3.28□□□□□ -1.88
CLOCK-206ENST00000506923 A0A0J9YYE9 177 aa3.28□□□□□ -1.88
CLOCK-206ENST00000506923 A0A1W2PQ67 120 aa3.28□□□□□ -1.88
CLOCK-206ENST00000506923 RHPN2P1A8MT19 583 aa3.28□□□□□ -1.88
CLOCK-206ENST00000506923 C10orf142B7Z368 130 aa3.28□□□□□ -1.88
CLOCK-206ENST00000506923 YY2O15391 372 aa3.28□□□□□ -1.88
CLOCK-206ENST00000506923 HTRA2O43464 458 aaPredicted RBP3.28□□□□□ -1.88
CLOCK-206ENST00000506923 PSTPIP1O43586 416 aa3.28□□□□□ -1.88
CLOCK-206ENST00000506923 BUD23O43709 281 aaKnown RBP3.28□□□□□ -1.88
CLOCK-206ENST00000506923 TLX3O43711 291 aaPredicted RBP3.28□□□□□ -1.88
CLOCK-206ENST00000506923 PEX1O43933 1283 aa3.28□□□□□ -1.88
CLOCK-206ENST00000506923 CST8O60676 142 aa3.28□□□□□ -1.88
CLOCK-206ENST00000506923 SNX2O60749 519 aa3.28□□□□□ -1.88
CLOCK-206ENST00000506923 MTA2O94776 668 aa3.28□□□□□ -1.88
CLOCK-206ENST00000506923 CLDN7O95471 211 aa3.28□□□□□ -1.88
CLOCK-206ENST00000506923 MT-CYBP00156 380 aaPredicted RBP3.28□□□□□ -1.88
CLOCK-206ENST00000506923 TRBC1P01850 177 aa3.28□□□□□ -1.88
CLOCK-206ENST00000506923 ATP1A1P05023 1023 aaKnown RBP3.28□□□□□ -1.88
CLOCK-206ENST00000506923 GIMD1P0DJR0 217 aa3.28□□□□□ -1.88
CLOCK-206ENST00000506923 MYCLP1P12525 358 aaPredicted RBP3.28□□□□□ -1.88
CLOCK-206ENST00000506923 ACP5P13686 325 aa3.28□□□□□ -1.88
CLOCK-206ENST00000506923 HGFP14210 728 aa3.28□□□□□ -1.88
CLOCK-206ENST00000506923 ZFXP17010 805 aaPredicted RBP3.28□□□□□ -1.88
CLOCK-206ENST00000506923 GM2AP17900 193 aa3.28□□□□□ -1.88
CLOCK-206ENST00000506923 IL4RP24394 825 aa3.28□□□□□ -1.88
CLOCK-206ENST00000506923 CCNCP24863 283 aa3.28□□□□□ -1.88
CLOCK-206ENST00000506923 RBMS1P29558 406 aaKnown RBP3.28□□□□□ -1.88
CLOCK-206ENST00000506923 PBLDP30039 288 aaPredicted RBP3.28□□□□□ -1.88
CLOCK-206ENST00000506923 PTGER1P34995 402 aa3.28□□□□□ -1.88
CLOCK-206ENST00000506923 ACTR1BP42025 376 aa3.28□□□□□ -1.88
CLOCK-206ENST00000506923 ARHGAP25P42331 645 aa3.28□□□□□ -1.88
CLOCK-206ENST00000506923 SLC1A1P43005 524 aa3.28□□□□□ -1.88
CLOCK-206ENST00000506923 POLD2P49005 469 aa3.28□□□□□ -1.88
CLOCK-206ENST00000506923 PTH2RP49190 550 aa3.28□□□□□ -1.88
CLOCK-206ENST00000506923 ARSEP51690 589 aa3.28□□□□□ -1.88
CLOCK-206ENST00000506923 MAPK10P53779 464 aa3.28□□□□□ -1.88
CLOCK-206ENST00000506923 ACTR1AP61163 376 aa3.28□□□□□ -1.88
CLOCK-206ENST00000506923 CDK3Q00526 305 aa3.28□□□□□ -1.88
CLOCK-206ENST00000506923 E2F1Q01094 437 aa3.28□□□□□ -1.88
CLOCK-206ENST00000506923 PPIDQ08752 370 aaKnown RBP3.28□□□□□ -1.88
CLOCK-206ENST00000506923 NSUN2Q08J23 767 aaKnown RBP eCLIP3.28□□□□□ -1.88
CLOCK-206ENST00000506923 NIPAL4Q0D2K0 466 aa3.28□□□□□ -1.88
CLOCK-206ENST00000506923 ILF3Q12906 894 aaKnown RBP eCLIP3.28□□□□□ -1.887e-6■■■■□ 19.8
CLOCK-206ENST00000506923 SLC10A2Q12908 348 aaPredicted RBP3.28□□□□□ -1.88
CLOCK-206ENST00000506923 TBX2Q13207 712 aaPredicted RBP3.28□□□□□ -1.88
CLOCK-206ENST00000506923 ILKQ13418 452 aa3.28□□□□□ -1.88
CLOCK-206ENST00000506923 TFDP2Q14188 446 aa3.28□□□□□ -1.88
CLOCK-206ENST00000506923 PDK1Q15118 436 aa3.28□□□□□ -1.88
CLOCK-206ENST00000506923 NOMO1Q15155 1222 aa3.28□□□□□ -1.88
CLOCK-206ENST00000506923 SMAD1Q15797 465 aaKnown RBP3.28□□□□□ -1.88
CLOCK-206ENST00000506923 SEPT7Q16181 437 aaKnown RBP3.28□□□□□ -1.88
CLOCK-206ENST00000506923 INSCQ1MX18 579 aa3.28□□□□□ -1.88
CLOCK-206ENST00000506923 ASTE1Q2TB18 679 aaPredicted RBP3.28□□□□□ -1.88
CLOCK-206ENST00000506923 AMZ1Q400G9 498 aa3.28□□□□□ -1.88
CLOCK-206ENST00000506923 TFDP3Q5H9I0 405 aa3.28□□□□□ -1.88
CLOCK-206ENST00000506923 ZNF569Q5MCW4 686 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms