RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 ATXN3P54252 364 aaPredicted RBP16.79■□□□□ 0.28
TRAPPC11-204ENST00000505676 ABRQ12979 859 aa16.79■□□□□ 0.28
TRAPPC11-204ENST00000505676 ENPP2Q13822 863 aa16.79■□□□□ 0.28
TRAPPC11-204ENST00000505676 ZXDCQ2QGD7 858 aaPredicted RBP16.79■□□□□ 0.28
TRAPPC11-204ENST00000505676 SGO1Q5FBB7 561 aa16.79■□□□□ 0.28
TRAPPC11-204ENST00000505676 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.79■□□□□ 0.28
TRAPPC11-204ENST00000505676 TBC1D21Q8IYX1 336 aa16.79■□□□□ 0.28
TRAPPC11-204ENST00000505676 OR52E4Q8NGH9 312 aa16.79■□□□□ 0.28
TRAPPC11-204ENST00000505676 OR2L2Q8NH16 312 aa16.79■□□□□ 0.28
TRAPPC11-204ENST00000505676 SLCO4A1Q96BD0 722 aa16.79■□□□□ 0.28
TRAPPC11-204ENST00000505676 PRSS16Q9NQE7 514 aa16.79■□□□□ 0.28
TRAPPC11-204ENST00000505676 ANKRD12Q6UB98 2062 aa16.79■□□□□ 0.28
TRAPPC11-204ENST00000505676 INPP4BO15327 924 aa16.78■□□□□ 0.28
TRAPPC11-204ENST00000505676 FASP25445 335 aa16.78■□□□□ 0.28
TRAPPC11-204ENST00000505676 FOLH1Q04609 750 aa16.78■□□□□ 0.28
TRAPPC11-204ENST00000505676 CAPN13Q6MZZ7 669 aaPredicted RBP16.78■□□□□ 0.28
TRAPPC11-204ENST00000505676 GTF2H4Q92759 462 aa16.78■□□□□ 0.28
TRAPPC11-204ENST00000505676 HIC2Q96JB3 615 aa16.78■□□□□ 0.28
TRAPPC11-204ENST00000505676 KCNH6Q9H252 994 aa16.78■□□□□ 0.28
TRAPPC11-204ENST00000505676 EHD1Q9H4M9 534 aa16.78■□□□□ 0.28
TRAPPC11-204ENST00000505676 ZNHIT2Q9UHR6 403 aa16.78■□□□□ 0.28
TRAPPC11-204ENST00000505676 ATG2AQ2TAZ0 1938 aa16.78■□□□□ 0.28
TRAPPC11-204ENST00000505676 MYO1DO94832 1006 aa16.78■□□□□ 0.28
TRAPPC11-204ENST00000505676 C1orf105O95561 183 aa16.78■□□□□ 0.28
TRAPPC11-204ENST00000505676 EPHX1P07099 455 aa16.78■□□□□ 0.28
TRAPPC11-204ENST00000505676 LYNP07948 512 aa16.78■□□□□ 0.28
TRAPPC11-204ENST00000505676 PRPS1L1P21108 318 aa16.78■□□□□ 0.28
TRAPPC11-204ENST00000505676 P2RY2P41231 377 aa16.78■□□□□ 0.28
TRAPPC11-204ENST00000505676 IL12RB1P42701 662 aa16.78■□□□□ 0.28
TRAPPC11-204ENST00000505676 FAM174BQ3ZCQ3 159 aa16.78■□□□□ 0.28
TRAPPC11-204ENST00000505676 XKR6Q5GH73 641 aa16.78■□□□□ 0.28
TRAPPC11-204ENST00000505676 RABL3Q5HYI8 236 aa16.78■□□□□ 0.28
TRAPPC11-204ENST00000505676 HABP4Q5JVS0 413 aaKnown RBP16.78■□□□□ 0.28
TRAPPC11-204ENST00000505676 TBCELQ5QJ74 424 aa16.78■□□□□ 0.28
TRAPPC11-204ENST00000505676 ATAT1Q5SQI0 421 aa16.78■□□□□ 0.28
TRAPPC11-204ENST00000505676 INTS11Q5TA45 600 aaKnown RBP16.78■□□□□ 0.28
TRAPPC11-204ENST00000505676 TRAPPC5Q8IUR0 188 aa16.78■□□□□ 0.28
TRAPPC11-204ENST00000505676 TRPV3Q8NET8 790 aa16.78■□□□□ 0.28
TRAPPC11-204ENST00000505676 WDR20Q8TBZ3 569 aa16.78■□□□□ 0.28
TRAPPC11-204ENST00000505676 CANT1Q8WVQ1 401 aa16.78■□□□□ 0.28
TRAPPC11-204ENST00000505676 WDR34Q96EX3 536 aa16.78■□□□□ 0.28
TRAPPC11-204ENST00000505676 ITCHQ96J02 903 aa16.78■□□□□ 0.28
TRAPPC11-204ENST00000505676 FBRSQ9HAH7 460 aa16.78■□□□□ 0.28
TRAPPC11-204ENST00000505676 INTS7Q9NVH2 962 aaKnown RBP16.78■□□□□ 0.28
TRAPPC11-204ENST00000505676 ANAPC2Q9UJX6 822 aa16.78■□□□□ 0.28
TRAPPC11-204ENST00000505676 RUVBL1Q9Y265 456 aaKnown RBP16.78■□□□□ 0.28
TRAPPC11-204ENST00000505676 COL4A3Q01955 1670 aa16.78■□□□□ 0.28
TRAPPC11-204ENST00000505676 MGAT4DA6NG13 374 aa16.77■□□□□ 0.28
TRAPPC11-204ENST00000505676 TMEM202A6NGA9 273 aa16.77■□□□□ 0.28
TRAPPC11-204ENST00000505676 ZNF839A8K0R7 811 aa16.77■□□□□ 0.28
TRAPPC11-204ENST00000505676 MMP20O60882 483 aa16.77■□□□□ 0.28
TRAPPC11-204ENST00000505676 AMD1P17707 334 aa16.77■□□□□ 0.28
TRAPPC11-204ENST00000505676 ITPKAP23677 461 aa16.77■□□□□ 0.28
TRAPPC11-204ENST00000505676 IMPA1P29218 277 aa16.77■□□□□ 0.28
TRAPPC11-204ENST00000505676 NAE1Q13564 534 aa16.77■□□□□ 0.28
TRAPPC11-204ENST00000505676 PTGR1Q14914 329 aa16.77■□□□□ 0.28
TRAPPC11-204ENST00000505676 ITPRIPL2Q3MIP1 535 aa16.77■□□□□ 0.28
TRAPPC11-204ENST00000505676 LRIF1Q5T3J3 769 aa16.77■□□□□ 0.28
TRAPPC11-204ENST00000505676 ZNF648Q5T619 568 aaPredicted RBP16.77■□□□□ 0.28
TRAPPC11-204ENST00000505676 MMAAQ8IVH4 418 aaKnown RBP16.77■□□□□ 0.28
TRAPPC11-204ENST00000505676 PPWD1Q96BP3 646 aaKnown RBP16.77■□□□□ 0.28
TRAPPC11-204ENST00000505676 COX14Q96I36 57 aa16.77■□□□□ 0.28
TRAPPC11-204ENST00000505676 NSMCE2Q96MF7 247 aa16.77■□□□□ 0.28
TRAPPC11-204ENST00000505676 PKP4Q99569 1192 aa16.77■□□□□ 0.28
TRAPPC11-204ENST00000505676 OSBPL11Q9BXB4 747 aa16.77■□□□□ 0.28
TRAPPC11-204ENST00000505676 PBX4Q9BYU1 374 aa16.77■□□□□ 0.28
TRAPPC11-204ENST00000505676 ATG10Q9H0Y0 220 aa16.77■□□□□ 0.28
TRAPPC11-204ENST00000505676 SPATA6Q9NWH7 488 aaPredicted RBP16.77■□□□□ 0.28
TRAPPC11-204ENST00000505676 A0A096LPI6 279 aa16.77■□□□□ 0.27
TRAPPC11-204ENST00000505676 RPN2P04844 631 aa16.77■□□□□ 0.27
TRAPPC11-204ENST00000505676 S100A3P33764 101 aa16.77■□□□□ 0.27
TRAPPC11-204ENST00000505676 TNFRSF4P43489 277 aa16.77■□□□□ 0.27
TRAPPC11-204ENST00000505676 SRSF11Q05519 484 aaKnown RBP16.77■□□□□ 0.27
TRAPPC11-204ENST00000505676 LRRC74AQ0VAA2 488 aa16.77■□□□□ 0.27
TRAPPC11-204ENST00000505676 MESP2Q0VG99 397 aa16.77■□□□□ 0.27
TRAPPC11-204ENST00000505676 LAPTM5Q13571 262 aa16.77■□□□□ 0.27
TRAPPC11-204ENST00000505676 GRM2Q14416 872 aa16.77■□□□□ 0.27
TRAPPC11-204ENST00000505676 PAGE2BQ5JRK9 111 aa16.77■□□□□ 0.27
TRAPPC11-204ENST00000505676 ATG9BQ674R7 924 aa16.77■□□□□ 0.27
TRAPPC11-204ENST00000505676 SUSD1Q6UWL2 747 aa16.77■□□□□ 0.27
TRAPPC11-204ENST00000505676 SPPL2CQ8IUH8 684 aa16.77■□□□□ 0.27
TRAPPC11-204ENST00000505676 ADGRG5Q8IZF4 528 aa16.77■□□□□ 0.27
TRAPPC11-204ENST00000505676 ST13P4Q8IZP2 240 aaPredicted RBP16.77■□□□□ 0.27
TRAPPC11-204ENST00000505676 LRTOMTQ8WZ04 291 aa16.77■□□□□ 0.27
TRAPPC11-204ENST00000505676 PYCR2Q96C36 320 aa16.77■□□□□ 0.27
TRAPPC11-204ENST00000505676 ZNF597Q96LX8 424 aa16.77■□□□□ 0.27
TRAPPC11-204ENST00000505676 OR52E6Q96RD3 313 aa16.77■□□□□ 0.27
TRAPPC11-204ENST00000505676 EFCAB11Q9BUY7 163 aa16.77■□□□□ 0.27
TRAPPC11-204ENST00000505676 RSPH9Q9H1X1 276 aaPredicted RBP16.77■□□□□ 0.27
TRAPPC11-204ENST00000505676 OR2AG1Q9H205 316 aa16.77■□□□□ 0.27
TRAPPC11-204ENST00000505676 NKX2-4Q9H2Z4 354 aa16.77■□□□□ 0.27
TRAPPC11-204ENST00000505676 VPS29Q9UBQ0 182 aa16.77■□□□□ 0.27
TRAPPC11-204ENST00000505676 TCRBV5S2A0A599 114 aa16.76■□□□□ 0.27
TRAPPC11-204ENST00000505676 AKAP10O43572 662 aa16.76■□□□□ 0.27
TRAPPC11-204ENST00000505676 ZNF26P17031 533 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC11-204ENST00000505676 C5AR1P21730 350 aa16.76■□□□□ 0.27
TRAPPC11-204ENST00000505676 HSD17B2P37059 387 aa16.76■□□□□ 0.27
TRAPPC11-204ENST00000505676 ASMTP46597 345 aa16.76■□□□□ 0.27
TRAPPC11-204ENST00000505676 PREPP48147 710 aa16.76■□□□□ 0.27
TRAPPC11-204ENST00000505676 PDK3Q15120 406 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms