RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 ZNF839A8K0R7 811 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 RBP1P09455 135 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 SMIM10L1P0DMW3 83 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 ZNF33BQ06732 778 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 TSNQ15631 228 aaKnown RBP8□□□□□ -1.13
CDC42SE2-208ENST00000505065 ZNF385CQ66K41 422 aaPredicted RBP8□□□□□ -1.13
CDC42SE2-208ENST00000505065 ATG9BQ674R7 924 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 UBE2R2Q712K3 238 aaPredicted RBP8□□□□□ -1.13
CDC42SE2-208ENST00000505065 AFAP1L2Q8N4X5 818 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 SMIM10Q96HG1 83 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 NRTNQ99748 197 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 CD244Q9BZW8 370 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 PCBD2Q9H0N5 130 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 SEMA6CQ9H3T2 930 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 CCDC134Q9H6E4 229 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 ZNF225Q9UK10 706 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 PCTPQ9UKL6 214 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 EXPH5Q8NEV8 1989 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 CUL9Q8IWT3 2517 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 TLCD2A6NGC4 264 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 CDRT15L2A8MXV6 281 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 E5RI56 91 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 WFS1O76024 890 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 SLC16A8O95907 504 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 TOP3BO95985 862 aaKnown RBP8□□□□□ -1.13
CDC42SE2-208ENST00000505065 PYGBP11216 843 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 PRPH2P23942 346 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 RPL10P27635 214 aaKnown RBP8□□□□□ -1.13
CDC42SE2-208ENST00000505065 SERPINB5P36952 375 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 REEP5Q00765 189 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 SYTL3Q4VX76 610 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 NAPRTQ6XQN6 538 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 GDAP1Q8TB36 358 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 NT5CQ8TCD5 201 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 MRPL46Q9H2W6 279 aaKnown RBP8□□□□□ -1.13
CDC42SE2-208ENST00000505065 GSTO2Q9H4Y5 243 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 C1GALT1Q9NS00 363 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 PCDHGA3Q9Y5H0 932 aa8□□□□□ -1.13
CDC42SE2-208ENST00000505065 OR7A17O14581 309 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 SNUPNO95149 360 aaKnown RBP7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 UGT2B7P16662 529 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 HSPA14Q0VDF9 509 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 HYAL2Q12891 473 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 FAM83EQ2M2I3 478 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 ADPRMQ3LIE5 342 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 PRAMEF14Q5SWL7 426 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 CAPN12Q6ZSI9 719 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 EFL1Q7Z2Z2 1120 aaKnown RBP7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 OR2L3Q8NG85 312 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 ZUFSPQ96AP4 578 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 FAM122AQ96E09 287 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 FCRL4Q96PJ5 515 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 TRAPPC9Q96Q05 1148 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 CNOT10Q9H9A5 744 aaKnown RBP7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 SPHK1Q9NYA1 384 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 A8MT66 165 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 B4DGG1 531 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 IFRD1O00458 451 aaPredicted RBP7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 SNNO75324 88 aaPredicted RBP7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 CATP04040 527 aaKnown RBP7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 FGF5P12034 268 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 CREB1P16220 341 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 CYP2A7P20853 494 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 NAA25Q14CX7 972 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 ZNF678Q5SXM1 525 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 ATL1Q8WXF7 558 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 TBC1D10AQ9BXI6 508 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 CCDC68Q9H2F9 335 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 FBXO8Q9NRD0 319 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 RP1P56715 2156 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 FOXO6A8MYZ6 492 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 H3BQF6 201 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 CASC3O15234 703 aaKnown RBP7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 DLX3O60479 287 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 FTH1P19P0C7X4 201 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 NELFEP18615 380 aaKnown RBP7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 CD22P20273 847 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 IMPDH1P20839 514 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 ARRB2P32121 409 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 OR1D5P58170 312 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 HERVK_113P63132 956 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 SLCO4C1Q6ZQN7 724 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 BPHLQ86WA6 291 aaPredicted RBP7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 LRRC34Q8IZ02 419 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 LSMEM2Q8N112 164 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 THAP11Q96EK4 314 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 GTPBP2Q9BX10 602 aaKnown RBP7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 ERVK-6Q9BXR3 956 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 AICDAQ9GZX7 198 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 ZNF358Q9NW07 568 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 ACTR10Q9NZ32 417 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 SDK2Q58EX2 2172 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 UQCRHLA0A096LP55 91 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 A0A1W2PQ72 361 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 SYCE1LA8MT33 242 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 POC1B-GALNT4F8VUJ3 575 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 KDM1AO60341 852 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 UQCRHP07919 91 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 FGF3P11487 239 aaPredicted RBP7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 ITGB6P18564 788 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms