RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	PRAMEF4	O60810	478 aa		11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	EPN2	O95208	641 aa		11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	GIMD1	P0DJR0	217 aa		11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	PRDX3	P30048	256 aa	Known RBP	11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	PIK3CG	P48736	1102 aa		11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	PKNOX1	P55347	436 aa		11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	TBPL1	P62380	186 aa		11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	PRKG2	Q13237	762 aa		11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	FASTK	Q14296	549 aa	Known RBP	11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	DUOXA1	Q1HG43	343 aa		11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	PRAMEF14	Q5SWL7	426 aa		11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	PRAMEF9	Q5VWM5	478 aa		11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	OGFOD3	Q6PK18	319 aa		11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	MAVS	Q7Z434	540 aa		11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	RABEPK	Q7Z6M1	372 aa		11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	SYVN1	Q86TM6	617 aa		11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	THOC6	Q86W42	341 aa	Known RBP	11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	GKN2	Q86XP6	184 aa		11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	SFTPA2	Q8IWL1	248 aa		11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	TEX9	Q8N6V9	391 aa		11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	LINC01555	Q8NAE3	123 aa		11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	OR52B6	Q8NGF0	335 aa		11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	OR52E1	Q8NGJ3	308 aa		11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	PIWIL2	Q8TC59	973 aa	Known RBP	11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	LMX1A	Q8TE12	382 aa		11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	SLC37A2	Q8TED4	501 aa		11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	PPP4R1	Q8TF05	950 aa		11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	ZNF473	Q8WTR7	871 aa	Known RBP	11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	ZFPM2	Q8WW38	1151 aa		11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	PATE1	Q8WXA2	126 aa		11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	PYCR2	Q96C36	320 aa		11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	LOXL4	Q96JB6	756 aa		11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	ELF4	Q99607	663 aa	Predicted RBP	11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	ILKAP	Q9H0C8	392 aa	Predicted RBP	11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	RABEP2	Q9H5N1	569 aa		11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	KCNK13	Q9HB14	408 aa		11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	EML4	Q9HC35	981 aa	Known RBP	11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	SEMA4B	Q9NPR2	832 aa	Predicted RBP	11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	POT1	Q9NUX5	634 aa		11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	DNAJC11	Q9NVH1	559 aa		11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	PLAGL1	Q9UM63	463 aa		11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	ICK	Q9UPZ9	632 aa		11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	CSNK1G3	Q9Y6M4	447 aa		11.77	□□□□□ -0.53
MATR3-231	ENST00000502394	USP34	Q70CQ2	3546 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394		A0A1B0GTQ1	180 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	MATN2	O00339	956 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	YY2	O15391	372 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	PRICKLE3	O43900	615 aa	Predicted RBP	11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	NOBOX	O60393	691 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	WDR47	O94967	919 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	ESRRB	O95718	433 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	SLC2A4	P14672	509 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	PI4KA	P42356	2102 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	RPL14	P50914	215 aa	Known RBP	11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	RAB28	P51157	221 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	HK2	P52789	917 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	ERVPABLB-1	P60509	514 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	GRIK2	Q13002	908 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	CDC16	Q13042	620 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	UGT3A2	Q3SY77	523 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	FAM219B	Q5XKK7	198 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	KANK2	Q63ZY3	851 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	LETMD1	Q6P1Q0	360 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	SLC23A3	Q6PIS1	610 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	CPLX4	Q7Z7G2	160 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	KIRREL3	Q8IZU9	778 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	LMNTD1	Q8N9Z9	388 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	L3MBTL4	Q8NA19	623 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	PPFIBP2	Q8ND30	876 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	OR2L8	Q8NGY9	312 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	RFWD2	Q8NHY2	731 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	CEP76	Q8TAP6	659 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	BCAS4	Q8TDM0	211 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	ZDHHC1	Q8WTX9	485 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	C10orf82	Q8WW14	230 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	STON2	Q8WXE9	905 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	ELAC2	Q9BQ52	826 aa	Known RBP	11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	RAB11FIP5	Q9BXF6	653 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	TRIM55	Q9BYV6	548 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	SHCBP1L	Q9BZQ2	653 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	FAM107B	Q9H098	131 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	NOL11	Q9H8H0	719 aa	Known RBP	11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	IPPK	Q9H8X2	491 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	SLC40A1	Q9NP59	571 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	UCKL1	Q9NWZ5	548 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	GPRC5B	Q9NZH0	403 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	KLHL14	Q9P2G3	628 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	CPNE7	Q9UBL6	633 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	SLC22A14	Q9Y267	594 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	STK38L	Q9Y2H1	464 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	TDRKH	Q9Y2W6	561 aa	Known RBP	11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	COLEC10	Q9Y6Z7	277 aa		11.76	□□□□□ -0.53
MATR3-231	ENST00000502394	CACNA1H	O95180	2353 aa		11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	KCNE1B	A0A087WTH5	132 aa		11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	ZNF839	A8K0R7	811 aa		11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	TMEM233	B4DJY2	109 aa		11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	KATNA1	O75449	491 aa		11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	OTC	P00480	354 aa		11.75	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 42 ms