RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 DPAGT1Q9H3H5 408 aa3.05□□□□□ -1.92
SMC4-227ENST00000497984 GNB4Q9HAV0 340 aa3.05□□□□□ -1.92
SMC4-227ENST00000497984 PRO0461Q9UI25 63 aa3.05□□□□□ -1.92
SMC4-227ENST00000497984 VPS28Q9UK41 221 aa3.05□□□□□ -1.92
SMC4-227ENST00000497984 OR10H2O60403 315 aa3.04□□□□□ -1.92
SMC4-227ENST00000497984 WDPCPO95876 746 aa3.04□□□□□ -1.92
SMC4-227ENST00000497984 GJA1P17302 382 aa3.04□□□□□ -1.92
SMC4-227ENST00000497984 SAT1P21673 171 aa3.04□□□□□ -1.92
SMC4-227ENST00000497984 NRIP1P48552 1158 aa3.04□□□□□ -1.92
SMC4-227ENST00000497984 SLC9A3P48764 834 aa3.04□□□□□ -1.92
SMC4-227ENST00000497984 CYCSP99999 105 aaKnown RBP3.04□□□□□ -1.92
SMC4-227ENST00000497984 BAATQ14032 418 aaPredicted RBP3.04□□□□□ -1.92
SMC4-227ENST00000497984 SIM2Q14190 667 aaPredicted RBP3.04□□□□□ -1.92
SMC4-227ENST00000497984 PCLAFQ15004 111 aa3.04□□□□□ -1.92
SMC4-227ENST00000497984 WTAPQ15007 396 aa3.04□□□□□ -1.92
SMC4-227ENST00000497984 MEA1Q16626 185 aa3.04□□□□□ -1.92
SMC4-227ENST00000497984 C15orf32Q32M92 178 aa3.04□□□□□ -1.92
SMC4-227ENST00000497984 FAM205BPQ63HN1 556 aa3.04□□□□□ -1.92
SMC4-227ENST00000497984 FIGLAQ6QHK4 219 aa3.04□□□□□ -1.92
SMC4-227ENST00000497984 AACSQ86V21 672 aa3.04□□□□□ -1.92
SMC4-227ENST00000497984 SLC47A2Q86VL8 602 aa3.04□□□□□ -1.92
SMC4-227ENST00000497984 MARCH9Q86YJ5 346 aa3.04□□□□□ -1.92
SMC4-227ENST00000497984 GUF1Q8N442 669 aaKnown RBP3.04□□□□□ -1.92
SMC4-227ENST00000497984 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.04□□□□□ -1.92
SMC4-227ENST00000497984 CCDC107Q8WV48 283 aa3.04□□□□□ -1.92
SMC4-227ENST00000497984 ARSGQ96EG1 525 aa3.04□□□□□ -1.92
SMC4-227ENST00000497984 ABCB10Q9NRK6 738 aa3.04□□□□□ -1.92
SMC4-227ENST00000497984 GIMAP4Q9NUV9 329 aa3.04□□□□□ -1.92
SMC4-227ENST00000497984 HAUS2Q9NVX0 235 aa3.04□□□□□ -1.92
SMC4-227ENST00000497984 NSMCE4AQ9NXX6 385 aa3.04□□□□□ -1.92
SMC4-227ENST00000497984 GRID1Q9ULK0 1009 aa3.04□□□□□ -1.92
SMC4-227ENST00000497984 LOC102723996A0A087X1L8 192 aa3.03□□□□□ -1.92
SMC4-227ENST00000497984 GPR75-ASB3A0A0A6YYF3 556 aa3.03□□□□□ -1.92
SMC4-227ENST00000497984 HYKKA2RU49 373 aa3.03□□□□□ -1.92
SMC4-227ENST00000497984 PHOX2AO14813 284 aa3.03□□□□□ -1.92
SMC4-227ENST00000497984 XRCC3O43542 346 aa3.03□□□□□ -1.92
SMC4-227ENST00000497984 OR2T7P0C7T2 308 aa3.03□□□□□ -1.92
SMC4-227ENST00000497984 IGHV4-31P0DP07 118 aa3.03□□□□□ -1.92
SMC4-227ENST00000497984 PRKACGP22612 351 aa3.03□□□□□ -1.92
SMC4-227ENST00000497984 TMEM50BP56557 158 aa3.03□□□□□ -1.92
SMC4-227ENST00000497984 DMPKQ09013 629 aa3.03□□□□□ -1.92
SMC4-227ENST00000497984 CUL4AQ13619 759 aa3.03□□□□□ -1.92
SMC4-227ENST00000497984 MAPRE1Q15691 268 aaKnown RBP3.03□□□□□ -1.92
SMC4-227ENST00000497984 SPATA1Q5VX52 437 aa3.03□□□□□ -1.92
SMC4-227ENST00000497984 KBTBD6Q86V97 674 aa3.03□□□□□ -1.92
SMC4-227ENST00000497984 NUDT13Q86X67 352 aa3.03□□□□□ -1.92
SMC4-227ENST00000497984 COMMD2Q86X83 199 aa3.03□□□□□ -1.92
SMC4-227ENST00000497984 CEP57L1Q8IYX8 460 aa3.03□□□□□ -1.92
SMC4-227ENST00000497984 MINDY1Q8N5J2 469 aa3.03□□□□□ -1.92
SMC4-227ENST00000497984 AQP11Q8NBQ7 271 aa3.03□□□□□ -1.92
SMC4-227ENST00000497984 MCUQ8NE86 351 aa3.03□□□□□ -1.92
SMC4-227ENST00000497984 OR2AJ1Q8NGZ0 328 aa3.03□□□□□ -1.92
SMC4-227ENST00000497984 EXD1Q8NHP7 514 aa3.03□□□□□ -1.92
SMC4-227ENST00000497984 PRPF31Q8WWY3 499 aaKnown RBP3.03□□□□□ -1.92
SMC4-227ENST00000497984 IRGQQ8WZA9 623 aa3.03□□□□□ -1.92
SMC4-227ENST00000497984 MS4A10Q96PG2 267 aa3.03□□□□□ -1.92
SMC4-227ENST00000497984 PAFAH2Q99487 392 aa3.03□□□□□ -1.92
SMC4-227ENST00000497984 FNDC11Q9BVV2 318 aa3.03□□□□□ -1.92
SMC4-227ENST00000497984 WNT5BQ9H1J7 359 aa3.03□□□□□ -1.92
SMC4-227ENST00000497984 CHST11Q9NPF2 352 aa3.03□□□□□ -1.92
SMC4-227ENST00000497984 FGF21Q9NSA1 209 aa3.03□□□□□ -1.92
SMC4-227ENST00000497984 TBC1D29Q9UFV1 150 aa3.03□□□□□ -1.92
SMC4-227ENST00000497984 MTUS1Q9ULD2 1270 aa3.03□□□□□ -1.92
SMC4-227ENST00000497984 ANKUB1A6NFN9 424 aa3.02□□□□□ -1.93
SMC4-227ENST00000497984 ACOD1A6NK06 481 aa3.02□□□□□ -1.93
SMC4-227ENST00000497984 GLOD5A6NK44 160 aa3.02□□□□□ -1.93
SMC4-227ENST00000497984 ADAMDEC1O15204 470 aa3.02□□□□□ -1.93
SMC4-227ENST00000497984 FOLR2P14207 255 aa3.02□□□□□ -1.93
SMC4-227ENST00000497984 IL4RP24394 825 aa3.02□□□□□ -1.93
SMC4-227ENST00000497984 GCH1P30793 250 aa3.02□□□□□ -1.93
SMC4-227ENST00000497984 STAT2P52630 851 aa3.02□□□□□ -1.93
SMC4-227ENST00000497984 DLK1P80370 383 aa3.02□□□□□ -1.93
SMC4-227ENST00000497984 ZFP36L1Q07352 338 aaKnown RBP3.02□□□□□ -1.93
SMC4-227ENST00000497984 HIGD2BQ4VC39 106 aa3.02□□□□□ -1.93
SMC4-227ENST00000497984 ITPRIPL1Q6GPH6 555 aa3.02□□□□□ -1.93
SMC4-227ENST00000497984 MZT2BQ6NZ67 158 aa3.02□□□□□ -1.93
SMC4-227ENST00000497984 SLC25A47Q6Q0C1 308 aa3.02□□□□□ -1.93
SMC4-227ENST00000497984 TMPRSS11FQ6ZWK6 438 aa3.02□□□□□ -1.93
SMC4-227ENST00000497984 BRINP3Q76B58 766 aa3.02□□□□□ -1.93
SMC4-227ENST00000497984 FAM114A1Q8IWE2 563 aa3.02□□□□□ -1.93
SMC4-227ENST00000497984 TAGAPQ8N103 731 aa3.02□□□□□ -1.93
SMC4-227ENST00000497984 C17orf53Q8N3J3 647 aaPredicted RBP3.02□□□□□ -1.93
SMC4-227ENST00000497984 OR10S1Q8NGN2 331 aa3.02□□□□□ -1.93
SMC4-227ENST00000497984 OR5M8Q8NGP6 311 aa3.02□□□□□ -1.93
SMC4-227ENST00000497984 OR13J1Q8NGT2 312 aa3.02□□□□□ -1.93
SMC4-227ENST00000497984 VANGL1Q8TAA9 524 aaPredicted RBP3.02□□□□□ -1.93
SMC4-227ENST00000497984 LPGAT1Q92604 370 aa3.02□□□□□ -1.93
SMC4-227ENST00000497984 ZNF622Q969S3 477 aaKnown RBP eCLIP3.02□□□□□ -1.932e-7■■□□□ 11.8
SMC4-227ENST00000497984 CALML4Q96GE6 196 aa3.02□□□□□ -1.93
SMC4-227ENST00000497984 RSRC1Q96IZ7 334 aaKnown RBP3.02□□□□□ -1.93
SMC4-227ENST00000497984 CYYR1Q96J86 154 aa3.02□□□□□ -1.93
SMC4-227ENST00000497984 SDF4Q9BRK5 362 aa3.02□□□□□ -1.93
SMC4-227ENST00000497984 MAN2C1Q9NTJ4 1040 aa3.02□□□□□ -1.93
SMC4-227ENST00000497984 OSER1Q9NX31 292 aa3.02□□□□□ -1.93
SMC4-227ENST00000497984 STK26Q9P289 416 aa3.02□□□□□ -1.93
SMC4-227ENST00000497984 GPR34Q9UPC5 381 aa3.02□□□□□ -1.93
SMC4-227ENST00000497984 TMEM5Q9Y2B1 443 aa3.02□□□□□ -1.93
SMC4-227ENST00000497984 TRIM17Q9Y577 477 aa3.02□□□□□ -1.93
SMC4-227ENST00000497984 SH3BP5O60239 455 aa3.01□□□□□ -1.93
SMC4-227ENST00000497984 WDHD1O75717 1129 aaPredicted RBP3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms