RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 H3BQF6 201 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 NTN3O00634 580 aaPredicted RBP13.04□□□□□ -0.32
PTPN7-218ENST00000496197 KIF1CO43896 1103 aaKnown RBP13.04□□□□□ -0.32
PTPN7-218ENST00000496197 DLX3O60479 287 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 SIX3O95343 332 aaPredicted RBP13.04□□□□□ -0.32
PTPN7-218ENST00000496197 GP1BAP07359 652 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 ANXA5P08758 320 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 HIST1H2AGP0C0S8 130 aaPredicted RBP13.04□□□□□ -0.32
PTPN7-218ENST00000496197 AMD1P17707 334 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 HIST1H2ADP20671 130 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 MPSTP25325 297 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 ETV4P43268 484 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 SLC6A12P48065 614 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 CCT5P48643 541 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 HSPA7P48741 367 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 KPNA2P52292 529 aaKnown RBP13.04□□□□□ -0.32
PTPN7-218ENST00000496197 PDX1P52945 283 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 NAE1Q13564 534 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 PCLAFQ15004 111 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 PFKFB4Q16877 469 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 PTCHD3Q3KNS1 767 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 FAM219BQ5XKK7 198 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 ANKS6Q68DC2 871 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 SYTL1Q8IYJ3 562 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 ARMC2Q8NEN0 867 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 NCSTNQ92542 709 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 PHF21BQ96EK2 531 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 HIST1H2AHQ96KK5 128 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 OR2A14Q96R47 310 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 OR4K3Q96R72 315 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 HIST1H2AJQ99878 128 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 H2AFJQ9BTM1 129 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 MECRQ9BV79 373 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 TRIM54Q9BYV2 358 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 SSU72Q9NP77 194 aaKnown RBP13.04□□□□□ -0.32
PTPN7-218ENST00000496197 HRASLS2Q9NWW9 162 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 OR6C2Q9NZP2 312 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 CEP250Q9BV73 2442 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 GSAPA4D1B5 854 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 FAM221BA6H8Z2 402 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 PRPF4O43172 522 aaKnown RBP eCLIP13.04□□□□□ -0.32
PTPN7-218ENST00000496197 OPA1O60313 960 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 NRP2O60462 931 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 RFPL3O75679 317 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 DKK1O94907 266 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 UGT2B7P16662 529 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 GPLD1P80108 840 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 TSTA3Q13630 321 aaPredicted RBP13.04□□□□□ -0.32
PTPN7-218ENST00000496197 ARHGAP19Q14CB8 494 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 SETDB1Q15047 1291 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 TRIM73Q86UV7 250 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 OOSP2Q86WS3 158 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 FBXO39Q8N4B4 442 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 PTGR2Q8N8N7 351 aaPredicted RBP13.04□□□□□ -0.32
PTPN7-218ENST00000496197 OR2A1Q8NGT9 310 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 OR56A3Q8NH54 315 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 ALKBH8Q96BT7 664 aaKnown RBP13.04□□□□□ -0.32
PTPN7-218ENST00000496197 MED8Q96G25 268 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 ACAT2Q9BWD1 397 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 SGPP1Q9BX95 441 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 RAB11FIP5Q9BXF6 653 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 PITPNM3Q9BZ71 974 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 SYNDIG1Q9H7V2 258 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 MLXIPLQ9NP71 852 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 ACTR10Q9NZ32 417 aa13.04□□□□□ -0.32
PTPN7-218ENST00000496197 KIF26BQ2KJY2 2108 aa13.03□□□□□ -0.32
PTPN7-218ENST00000496197 TMEM120BA0PK00 339 aa13.03□□□□□ -0.32
PTPN7-218ENST00000496197 CCDC189A1A4V9 331 aa13.03□□□□□ -0.32
PTPN7-218ENST00000496197 PIPSLA2A3N6 862 aa13.03□□□□□ -0.32
PTPN7-218ENST00000496197 DCDC2BA2VCK2 349 aa13.03□□□□□ -0.32
PTPN7-218ENST00000496197 SYCE1LA8MT33 242 aa13.03□□□□□ -0.32
PTPN7-218ENST00000496197 ISM1B1AKI9 464 aa13.03□□□□□ -0.32
PTPN7-218ENST00000496197 CAPN5O15484 640 aaPredicted RBP13.03□□□□□ -0.32
PTPN7-218ENST00000496197 DUX1O43812 170 aa13.03□□□□□ -0.32
PTPN7-218ENST00000496197 PRAMEF10O60809 474 aa13.03□□□□□ -0.32
PTPN7-218ENST00000496197 FTH1P19P0C7X4 201 aa13.03□□□□□ -0.32
PTPN7-218ENST00000496197 GFAPP14136 432 aa13.03□□□□□ -0.32
PTPN7-218ENST00000496197 PVRP15151 417 aa13.03□□□□□ -0.32
PTPN7-218ENST00000496197 EPORP19235 508 aa13.03□□□□□ -0.32
PTPN7-218ENST00000496197 GGT5P36269 586 aa13.03□□□□□ -0.32
PTPN7-218ENST00000496197 NOVA1P51513 510 aaKnown RBP13.03□□□□□ -0.32
PTPN7-218ENST00000496197 INSM1Q01101 510 aaPredicted RBP13.03□□□□□ -0.32
PTPN7-218ENST00000496197 CCDC153Q494R4 210 aa13.03□□□□□ -0.32
PTPN7-218ENST00000496197 SULT1C3Q6IMI6 304 aa13.03□□□□□ -0.32
PTPN7-218ENST00000496197 IRGCQ6NXR0 463 aa13.03□□□□□ -0.32
PTPN7-218ENST00000496197 DHRS13Q6UX07 377 aa13.03□□□□□ -0.32
PTPN7-218ENST00000496197 ZYG11AQ6WRX3 759 aa13.03□□□□□ -0.32
PTPN7-218ENST00000496197 FAM92BQ6ZTR7 304 aa13.03□□□□□ -0.32
PTPN7-218ENST00000496197 B3GNT8Q7Z7M8 397 aa13.03□□□□□ -0.32
PTPN7-218ENST00000496197 UBTD2Q8WUN7 234 aa13.03□□□□□ -0.32
PTPN7-218ENST00000496197 AHCYL2Q96HN2 611 aaKnown RBP13.03□□□□□ -0.32
PTPN7-218ENST00000496197 TGM7Q96PF1 710 aa13.03□□□□□ -0.32
PTPN7-218ENST00000496197 TMEM237Q96Q45 408 aa13.03□□□□□ -0.32
PTPN7-218ENST00000496197 KLHL25Q9H0H3 589 aa13.03□□□□□ -0.32
PTPN7-218ENST00000496197 STMN4Q9H169 189 aaPredicted RBP13.03□□□□□ -0.32
PTPN7-218ENST00000496197 SEMA6CQ9H3T2 930 aa13.03□□□□□ -0.32
PTPN7-218ENST00000496197 SLC32A1Q9H598 525 aa13.03□□□□□ -0.32
PTPN7-218ENST00000496197 KCNK9Q9NPC2 374 aa13.03□□□□□ -0.32
PTPN7-218ENST00000496197 WWOXQ9NZC7 414 aa13.03□□□□□ -0.32
PTPN7-218ENST00000496197 COPG2Q9UBF2 871 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms