RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 B3GNT6Q6ZMB0 384 aa8.38□□□□□ -1.07
GARNL3-219ENST00000495172 RIPOR1Q6ZS17 1223 aa8.38□□□□□ -1.07
GARNL3-219ENST00000495172 LANCL3Q6ZV70 420 aa8.38□□□□□ -1.07
GARNL3-219ENST00000495172 STRADAQ7RTN6 431 aa8.38□□□□□ -1.07
GARNL3-219ENST00000495172 PAQR7Q86WK9 346 aa8.38□□□□□ -1.07
GARNL3-219ENST00000495172 TRAM1L1Q8N609 369 aa8.38□□□□□ -1.07
GARNL3-219ENST00000495172 TMEM35BQ8NCS4 154 aa8.38□□□□□ -1.07
GARNL3-219ENST00000495172 NAXEQ8NCW5 288 aa8.38□□□□□ -1.07
GARNL3-219ENST00000495172 RNASE6Q93091 150 aaKnown RBP8.38□□□□□ -1.07
GARNL3-219ENST00000495172 VPS50Q96JG6 964 aa8.38□□□□□ -1.07
GARNL3-219ENST00000495172 FERD3LQ96RJ6 166 aa8.38□□□□□ -1.07
GARNL3-219ENST00000495172 PIP5K1AQ99755 562 aa8.38□□□□□ -1.07
GARNL3-219ENST00000495172 HGH1Q9BTY7 390 aa8.38□□□□□ -1.07
GARNL3-219ENST00000495172 PDCL3Q9H2J4 239 aa8.38□□□□□ -1.07
GARNL3-219ENST00000495172 ETNK2Q9NVF9 386 aa8.38□□□□□ -1.07
GARNL3-219ENST00000495172 RIC8BQ9NVN3 520 aa8.38□□□□□ -1.07
GARNL3-219ENST00000495172 C6orf203Q9P0P8 240 aaPredicted RBP8.38□□□□□ -1.07
GARNL3-219ENST00000495172 NXT1Q9UKK6 140 aaKnown RBP8.38□□□□□ -1.07
GARNL3-219ENST00000495172 PLCL2Q9UPR0 1127 aa8.38□□□□□ -1.07
GARNL3-219ENST00000495172 FREM1Q5H8C1 2179 aa8.37□□□□□ -1.07
GARNL3-219ENST00000495172 MED12Q93074 2177 aa8.37□□□□□ -1.07
GARNL3-219ENST00000495172 GTPBP10A4D1E9 387 aaKnown RBP8.37□□□□□ -1.07
GARNL3-219ENST00000495172 RCCD1A6NED2 376 aa8.37□□□□□ -1.07
GARNL3-219ENST00000495172 GPR89AB7ZAQ6 455 aa8.37□□□□□ -1.07
GARNL3-219ENST00000495172 PMM2O15305 246 aa8.37□□□□□ -1.07
GARNL3-219ENST00000495172 TLX2O43763 284 aaPredicted RBP8.37□□□□□ -1.07
GARNL3-219ENST00000495172 NME2P1O60361 137 aa8.37□□□□□ -1.07
GARNL3-219ENST00000495172 UGT1A9O60656 530 aa8.37□□□□□ -1.07
GARNL3-219ENST00000495172 SLC25A12O75746 678 aa8.37□□□□□ -1.07
GARNL3-219ENST00000495172 GPR89BP0CG08 455 aa8.37□□□□□ -1.07
GARNL3-219ENST00000495172 CYP11B1P15538 503 aa8.37□□□□□ -1.07
GARNL3-219ENST00000495172 UGT1A6P19224 532 aa8.37□□□□□ -1.07
GARNL3-219ENST00000495172 UGT1A1P22309 533 aa8.37□□□□□ -1.07
GARNL3-219ENST00000495172 NME2P22392 152 aa8.37□□□□□ -1.07
GARNL3-219ENST00000495172 CXCR2P25025 360 aa8.37□□□□□ -1.07
GARNL3-219ENST00000495172 CDH5P33151 784 aaPredicted RBP8.37□□□□□ -1.07
GARNL3-219ENST00000495172 PTPN9P43378 593 aa8.37□□□□□ -1.07
GARNL3-219ENST00000495172 MMP13P45452 471 aa8.37□□□□□ -1.07
GARNL3-219ENST00000495172 ME1P48163 572 aa8.37□□□□□ -1.07
GARNL3-219ENST00000495172 FKBP3Q00688 224 aaKnown RBP8.37□□□□□ -1.07
GARNL3-219ENST00000495172 BTBD16Q32M84 506 aa8.37□□□□□ -1.07
GARNL3-219ENST00000495172 FNBP1LQ5T0N5 605 aa8.37□□□□□ -1.07
GARNL3-219ENST00000495172 HOOK3Q86VS8 718 aa8.37□□□□□ -1.07
GARNL3-219ENST00000495172 PLD6Q8N2A8 252 aaKnown RBP8.37□□□□□ -1.07
GARNL3-219ENST00000495172 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.37□□□□□ -1.07
GARNL3-219ENST00000495172 FAM98AQ8NCA5 519 aaKnown RBP8.37□□□□□ -1.07
GARNL3-219ENST00000495172 ACVR1CQ8NER5 493 aa8.37□□□□□ -1.07
GARNL3-219ENST00000495172 SLC30A5Q8TAD4 765 aa8.37□□□□□ -1.07
GARNL3-219ENST00000495172 PIGTQ969N2 578 aa8.37□□□□□ -1.07
GARNL3-219ENST00000495172 RBM41Q96IZ5 413 aaKnown RBP8.37□□□□□ -1.07
GARNL3-219ENST00000495172 SPATA32Q96LK8 384 aa8.37□□□□□ -1.07
GARNL3-219ENST00000495172 ZSCAN5AQ9BUG6 496 aa8.37□□□□□ -1.07
GARNL3-219ENST00000495172 YIPF2Q9BWQ6 316 aa8.37□□□□□ -1.07
GARNL3-219ENST00000495172 TDRD1Q9BXT4 1180 aaKnown RBP8.37□□□□□ -1.07
GARNL3-219ENST00000495172 REG4Q9BYZ8 158 aa8.37□□□□□ -1.07
GARNL3-219ENST00000495172 ZNF700Q9H0M5 742 aa8.37□□□□□ -1.07
GARNL3-219ENST00000495172 UGT1A7Q9HAW7 530 aa8.37□□□□□ -1.07
GARNL3-219ENST00000495172 UGT1A10Q9HAW8 530 aa8.37□□□□□ -1.07
GARNL3-219ENST00000495172 UGT1A8Q9HAW9 530 aa8.37□□□□□ -1.07
GARNL3-219ENST00000495172 ALKBH4Q9NXW9 302 aa8.37□□□□□ -1.07
GARNL3-219ENST00000495172 MKL2Q9ULH7 1088 aa8.37□□□□□ -1.07
GARNL3-219ENST00000495172 ICKQ9UPZ9 632 aa8.37□□□□□ -1.07
GARNL3-219ENST00000495172 TTLL3Q9Y4R7 772 aa8.37□□□□□ -1.07
GARNL3-219ENST00000495172 RAI1Q7Z5J4 1906 aaPredicted RBP8.37□□□□□ -1.07
GARNL3-219ENST00000495172 AURKAO14965 403 aa8.36□□□□□ -1.07
GARNL3-219ENST00000495172 NRP2O60462 931 aa8.36□□□□□ -1.07
GARNL3-219ENST00000495172 MAFKO60675 156 aa8.36□□□□□ -1.07
GARNL3-219ENST00000495172 SLC35G4P0C7Q5 338 aa8.36□□□□□ -1.07
GARNL3-219ENST00000495172 PEBP1P30086 187 aaKnown RBP8.36□□□□□ -1.07
GARNL3-219ENST00000495172 OCA2Q04671 838 aa8.36□□□□□ -1.07
GARNL3-219ENST00000495172 NIPAL4Q0D2K0 466 aa8.36□□□□□ -1.07
GARNL3-219ENST00000495172 GTF2H3Q13889 308 aa8.36□□□□□ -1.07
GARNL3-219ENST00000495172 VEZF1Q14119 521 aa8.36□□□□□ -1.07
GARNL3-219ENST00000495172 SYT16Q17RD7 645 aa8.36□□□□□ -1.07
GARNL3-219ENST00000495172 WDR59Q6PJI9 974 aa8.36□□□□□ -1.07
GARNL3-219ENST00000495172 SEM1Q6ZVN7 128 aa8.36□□□□□ -1.07
GARNL3-219ENST00000495172 AMIGO1Q86WK6 493 aa8.36□□□□□ -1.07
GARNL3-219ENST00000495172 SLC13A5Q86YT5 568 aaPredicted RBP8.36□□□□□ -1.07
GARNL3-219ENST00000495172 SULF2Q8IWU5 870 aa8.36□□□□□ -1.07
GARNL3-219ENST00000495172 NDUFAF2Q8N183 169 aa8.36□□□□□ -1.07
GARNL3-219ENST00000495172 SLC22A8Q8TCC7 542 aa8.36□□□□□ -1.07
GARNL3-219ENST00000495172 DLG3Q92796 817 aa8.36□□□□□ -1.07
GARNL3-219ENST00000495172 ZBED6CLQ96FA7 236 aaPredicted RBP8.36□□□□□ -1.07
GARNL3-219ENST00000495172 CAPZA3Q96KX2 299 aa8.36□□□□□ -1.07
GARNL3-219ENST00000495172 OLFM1Q99784 485 aa8.36□□□□□ -1.07
GARNL3-219ENST00000495172 C11orf70Q9BRQ4 267 aa8.36□□□□□ -1.07
GARNL3-219ENST00000495172 BEX2Q9BXY8 128 aa8.36□□□□□ -1.07
GARNL3-219ENST00000495172 DHX35Q9H5Z1 703 aaKnown RBP8.36□□□□□ -1.07
GARNL3-219ENST00000495172 KCNK13Q9HB14 408 aa8.36□□□□□ -1.07
GARNL3-219ENST00000495172 TEKT2Q9UIF3 430 aa8.36□□□□□ -1.07
GARNL3-219ENST00000495172 PLAGL1Q9UM63 463 aa8.36□□□□□ -1.07
GARNL3-219ENST00000495172 A0A1W2PQ72 361 aa8.35□□□□□ -1.07
GARNL3-219ENST00000495172 PINLYPA6NC86 204 aa8.35□□□□□ -1.07
GARNL3-219ENST00000495172 FAM166BA8MTA8 275 aa8.35□□□□□ -1.07
GARNL3-219ENST00000495172 MATN2O00339 956 aa8.35□□□□□ -1.07
GARNL3-219ENST00000495172 DAPK3O43293 454 aa8.35□□□□□ -1.07
GARNL3-219ENST00000495172 HEXBP07686 556 aa8.35□□□□□ -1.07
GARNL3-219ENST00000495172 MMEP08473 750 aa8.35□□□□□ -1.07
GARNL3-219ENST00000495172 TPBGLP0DKB5 382 aa8.35□□□□□ -1.07
GARNL3-219ENST00000495172 PFKFB1P16118 471 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms