RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973		E7ENX8	843 aa		13.12	□□□□□ -0.31
APTX-231	ENST00000494973	CCNT2	O60583	730 aa	Known RBP	13.12	□□□□□ -0.31
APTX-231	ENST00000494973	UGDH	O60701	494 aa		13.12	□□□□□ -0.31
APTX-231	ENST00000494973	WDR47	O94967	919 aa		13.12	□□□□□ -0.31
APTX-231	ENST00000494973	OTC	P00480	354 aa		13.12	□□□□□ -0.31
APTX-231	ENST00000494973	GIMD1	P0DJR0	217 aa		13.12	□□□□□ -0.31
APTX-231	ENST00000494973	MDH1	P40925	334 aa	Known RBP	13.12	□□□□□ -0.31
APTX-231	ENST00000494973	HSPA7	P48741	367 aa		13.12	□□□□□ -0.31
APTX-231	ENST00000494973	NAGLU	P54802	743 aa		13.12	□□□□□ -0.31
APTX-231	ENST00000494973	MAZ	P56270	477 aa	Known RBP	13.12	□□□□□ -0.31
APTX-231	ENST00000494973	DAB2	P98082	770 aa		13.12	□□□□□ -0.31
APTX-231	ENST00000494973	TAP2	Q03519	686 aa		13.12	□□□□□ -0.31
APTX-231	ENST00000494973	CDC16	Q13042	620 aa		13.12	□□□□□ -0.31
APTX-231	ENST00000494973	LCP2	Q13094	533 aa		13.12	□□□□□ -0.31
APTX-231	ENST00000494973	STX3	Q13277	289 aa		13.12	□□□□□ -0.31
APTX-231	ENST00000494973	NAE1	Q13564	534 aa		13.12	□□□□□ -0.31
APTX-231	ENST00000494973	RCN2	Q14257	317 aa		13.12	□□□□□ -0.31
APTX-231	ENST00000494973	CHI3L2	Q15782	390 aa		13.12	□□□□□ -0.31
APTX-231	ENST00000494973	PTCHD3	Q3KNS1	767 aa		13.12	□□□□□ -0.31
APTX-231	ENST00000494973	THEMIS2	Q5TEJ8	643 aa		13.12	□□□□□ -0.31
APTX-231	ENST00000494973	PRAMEF13	Q5VWM6	474 aa		13.12	□□□□□ -0.31
APTX-231	ENST00000494973	LCTL	Q6UWM7	567 aa		13.12	□□□□□ -0.31
APTX-231	ENST00000494973	DBX2	Q6ZNG2	339 aa		13.12	□□□□□ -0.31
APTX-231	ENST00000494973	CARF	Q8N187	725 aa		13.12	□□□□□ -0.31
APTX-231	ENST00000494973	CCNYL1	Q8N7R7	359 aa		13.12	□□□□□ -0.31
APTX-231	ENST00000494973	CKAP2	Q8WWK9	683 aa		13.12	□□□□□ -0.31
APTX-231	ENST00000494973	PATE1	Q8WXA2	126 aa		13.12	□□□□□ -0.31
APTX-231	ENST00000494973	APOLD1	Q96LR9	279 aa		13.12	□□□□□ -0.31
APTX-231	ENST00000494973	TMEM237	Q96Q45	408 aa		13.12	□□□□□ -0.31
APTX-231	ENST00000494973	TMEM79	Q9BSE2	394 aa		13.12	□□□□□ -0.31
APTX-231	ENST00000494973	SGPP1	Q9BX95	441 aa		13.12	□□□□□ -0.31
APTX-231	ENST00000494973	SMOC1	Q9H4F8	434 aa		13.12	□□□□□ -0.31
APTX-231	ENST00000494973	CCDC134	Q9H6E4	229 aa		13.12	□□□□□ -0.31
APTX-231	ENST00000494973	MANSC1	Q9H8J5	431 aa		13.12	□□□□□ -0.31
APTX-231	ENST00000494973	MLXIPL	Q9NP71	852 aa		13.12	□□□□□ -0.31
APTX-231	ENST00000494973	FAM86C1	Q9NVL1	165 aa		13.12	□□□□□ -0.31
APTX-231	ENST00000494973	LRIT1	Q9P2V4	623 aa		13.12	□□□□□ -0.31
APTX-231	ENST00000494973	PCDHB11	Q9Y5F2	797 aa		13.12	□□□□□ -0.31
APTX-231	ENST00000494973	ANKRD12	Q6UB98	2062 aa		13.12	□□□□□ -0.31
APTX-231	ENST00000494973	OTOGL	Q3ZCN5	2332 aa		13.11	□□□□□ -0.31
APTX-231	ENST00000494973	TRBV23OR9-2	A0A075B6M9	112 aa		13.11	□□□□□ -0.31
APTX-231	ENST00000494973	PIPSL	A2A3N6	862 aa		13.11	□□□□□ -0.31
APTX-231	ENST00000494973	WDR91	A4D1P6	747 aa		13.11	□□□□□ -0.31
APTX-231	ENST00000494973	EME2	A4GXA9	379 aa	Predicted RBP	13.11	□□□□□ -0.31
APTX-231	ENST00000494973	E2F3	O00716	465 aa		13.11	□□□□□ -0.31
APTX-231	ENST00000494973	HGS	O14964	777 aa	Predicted RBP	13.11	□□□□□ -0.31
APTX-231	ENST00000494973	CLGN	O14967	610 aa		13.11	□□□□□ -0.31
APTX-231	ENST00000494973	SIGLEC6	O43699	453 aa		13.11	□□□□□ -0.31
APTX-231	ENST00000494973	DUX1	O43812	170 aa		13.11	□□□□□ -0.31
APTX-231	ENST00000494973	UBXN7	O94888	489 aa		13.11	□□□□□ -0.31
APTX-231	ENST00000494973	CHRM5	P08912	532 aa	Predicted RBP	13.11	□□□□□ -0.31
APTX-231	ENST00000494973	FGF3	P11487	239 aa	Predicted RBP	13.11	□□□□□ -0.31
APTX-231	ENST00000494973	CKMT1A	P12532	417 aa		13.11	□□□□□ -0.31
APTX-231	ENST00000494973	AMD1	P17707	334 aa		13.11	□□□□□ -0.31
APTX-231	ENST00000494973	GNAZ	P19086	355 aa		13.11	□□□□□ -0.31
APTX-231	ENST00000494973	HK2	P52789	917 aa		13.11	□□□□□ -0.31
APTX-231	ENST00000494973	PKNOX1	P55347	436 aa		13.11	□□□□□ -0.31
APTX-231	ENST00000494973	GTF2H2	Q13888	395 aa		13.11	□□□□□ -0.31
APTX-231	ENST00000494973	SF3A2	Q15428	464 aa	Known RBP	13.11	□□□□□ -0.31
APTX-231	ENST00000494973	CCSMST1	Q4G0I0	132 aa		13.11	□□□□□ -0.31
APTX-231	ENST00000494973	GTF2H2C	Q6P1K8	395 aa		13.11	□□□□□ -0.31
APTX-231	ENST00000494973	MBOAT1	Q6ZNC8	495 aa		13.11	□□□□□ -0.31
APTX-231	ENST00000494973	FRMD7	Q6ZUT3	714 aa		13.11	□□□□□ -0.31
APTX-231	ENST00000494973	THOC6	Q86W42	341 aa	Known RBP	13.11	□□□□□ -0.31
APTX-231	ENST00000494973	EID2	Q8N6I1	236 aa		13.11	□□□□□ -0.31
APTX-231	ENST00000494973	SNX31	Q8N9S9	440 aa		13.11	□□□□□ -0.31
APTX-231	ENST00000494973	WDR48	Q8TAF3	677 aa		13.11	□□□□□ -0.31
APTX-231	ENST00000494973	ZNF483	Q8TF39	744 aa	Predicted RBP	13.11	□□□□□ -0.31
APTX-231	ENST00000494973	AHCYL2	Q96HN2	611 aa	Known RBP	13.11	□□□□□ -0.31
APTX-231	ENST00000494973	CD180	Q99467	661 aa		13.11	□□□□□ -0.31
APTX-231	ENST00000494973	CDC6	Q99741	560 aa		13.11	□□□□□ -0.31
APTX-231	ENST00000494973	MENT	Q9BUN1	341 aa		13.11	□□□□□ -0.31
APTX-231	ENST00000494973	MECR	Q9BV79	373 aa		13.11	□□□□□ -0.31
APTX-231	ENST00000494973	DRC3	Q9H069	523 aa		13.11	□□□□□ -0.31
APTX-231	ENST00000494973	ATG10	Q9H0Y0	220 aa		13.11	□□□□□ -0.31
APTX-231	ENST00000494973	EHD1	Q9H4M9	534 aa		13.11	□□□□□ -0.31
APTX-231	ENST00000494973	INTS7	Q9NVH2	962 aa	Known RBP	13.11	□□□□□ -0.31
APTX-231	ENST00000494973	THAP1	Q9NVV9	213 aa		13.11	□□□□□ -0.31
APTX-231	ENST00000494973	KCNK4	Q9NYG8	393 aa		13.11	□□□□□ -0.31
APTX-231	ENST00000494973	ANKMY1	Q9P2S6	941 aa		13.11	□□□□□ -0.31
APTX-231	ENST00000494973	FTSJ1	Q9UET6	329 aa		13.11	□□□□□ -0.31
APTX-231	ENST00000494973	PCTP	Q9UKL6	214 aa		13.11	□□□□□ -0.31
APTX-231	ENST00000494973	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	13.11	□□□□□ -0.31
APTX-231	ENST00000494973	OR5K3	A6NET4	321 aa		13.1	□□□□□ -0.31
APTX-231	ENST00000494973	TRIM38	O00635	465 aa		13.1	□□□□□ -0.31
APTX-231	ENST00000494973	TAPBP	O15533	448 aa		13.1	□□□□□ -0.31
APTX-231	ENST00000494973	HSPA4L	O95757	839 aa		13.1	□□□□□ -0.31
APTX-231	ENST00000494973	PROS1	P07225	676 aa		13.1	□□□□□ -0.31
APTX-231	ENST00000494973	GP1BA	P07359	652 aa		13.1	□□□□□ -0.31
APTX-231	ENST00000494973	BGN	P21810	368 aa		13.1	□□□□□ -0.31
APTX-231	ENST00000494973	CMPK1	P30085	196 aa		13.1	□□□□□ -0.31
APTX-231	ENST00000494973	CAPZB	P47756	277 aa		13.1	□□□□□ -0.31
APTX-231	ENST00000494973	CLC	Q05315	142 aa		13.1	□□□□□ -0.31
APTX-231	ENST00000494973	PCDH1	Q08174	1060 aa		13.1	□□□□□ -0.31
APTX-231	ENST00000494973	TSTA3	Q13630	321 aa	Predicted RBP	13.1	□□□□□ -0.31
APTX-231	ENST00000494973	PROX2	Q3B8N5	592 aa		13.1	□□□□□ -0.31
APTX-231	ENST00000494973	PAGE2B	Q5JRK9	111 aa		13.1	□□□□□ -0.31
APTX-231	ENST00000494973	C10orf62	Q5T681	223 aa	Predicted RBP	13.1	□□□□□ -0.31
APTX-231	ENST00000494973	EFL1	Q7Z2Z2	1120 aa	Known RBP	13.1	□□□□□ -0.31
APTX-231	ENST00000494973	C17orf64	Q86WR6	236 aa		13.1	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms